|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1178 | HQ2961A | VNG1215 | hla1694 | rrnAC0113 | HVO_2804 | Hbo2536 | Hut1466 | NP4128A | Hmu1230 |
574 | HQ2961A | 1270 | 402 | 443 | 443 | 492 | 517 | 456 | 469 | 501 |
741 | VNG1215 | 402 | 1209 | 486 | 509 | 596 | 549 | 527 | 564 | 582 |
678 | hla1694 | 443 | 486 | 1338 | 573 | 582 | 541 | 574 | 514 | 511 |
733 | rrnAC0113 | 443 | 509 | 573 | 1109 | 586 | 602 | 573 | 581 | 605 |
856 | HVO_2804 | 492 | 596 | 582 | 586 | 1313 | 692 | 624 | 646 | 642 |
851 | Hbo2536 | 517 | 549 | 541 | 602 | 692 | 1255 | 612 | 611 | 577 |
735 | Hut1466 | 456 | 527 | 574 | 573 | 624 | 612 | 1105 | 523 | 539 |
775 | NP4128A | 469 | 564 | 514 | 581 | 646 | 611 | 523 | 1277 | 624 |
734 | Hmu1230 | 501 | 582 | 511 | 605 | 642 | 577 | 539 | 624 | 1160 |
198 symbols consensus --------MTIEPASMDDVDAIADLWVELAADQRAHGSHLRAEENRGRIREAIARHVVAD #oth 1233343436265355433152211.15..33..322.2144231145211534233223 HQ2961A ::::MQDTI:::HP:VGA:NE:T:M:::::::::EYE:YIQP::S:EAV::M::HRIAS: VNG1215 ::::::::::VR:::GT:I::V:E:::Q:::E::::::::L:A::HAQA:DL:GQY:H:: hla1694 ::MADSDRVHVT::TV::::PVT:::IA::EG::::::T:L::::::SV::WV::S::TA rrnAC0113 ::::::::-------:::::T:V::::R::ES::::::::FGDR::TAV::TVVQRI::E HVO_2804 :::::::::RVSS:AFSEL:DLVE:::::::::::S:::::::A::TP::::L::::A:: Hbo2536 MDYTDGSAIQ:GRTNTAEI::L:::::S::::::SYQ::::SD:::::::::M:::::T: Hut1466 ::::::::-------:SA:::L:::::D::EG:::Y::::ATAP:::::::S:S::::TG NP4128A MSGEPPVDVD::::DA::A:R:::M::D::T:::R::::::P::::S::H:SMLQ:A::: Hmu1230 :::::::::E:AL::TGQ::D:TE::I:::SG::S::::ILP::::STA:D:VL::T::: consensus GVRVARV------------------ADRIVGFVMFTLERGAYEQDETRGIIRNLYVRPAH #oth 533113511111111112222222234732...22631316223231..315.11.5.55 HQ2961A C:Y::C:::::::::::ETDGQEQEQTQ:L:::TYEI:::::ALS::::::Q::::T:SK VNG1215 ::A:TTQ:::::::::::::::::::G:T::::::HT:T:F::T:R:::V:D::::A:GF hla1694 ELL:::DG:::::::::::::::::::DLI:::G:A:D::G::R:R:::VVS::F:V:ER rrnAC0113 N::I::I::::::::::::::::::DQH:I::::M::DS:R::::::::::E:IF:E:V: HVO_2804 ::L:::EGDVSNGGTEVGSSAEDAD::GL::::::DI:A::::::A:::MV:::F::::Y Hbo2536 :I:::::::::::::::::::::::S:E::::::YS::::DF:::::::V::::::K::: Hut1466 RI::::E:::::::::::::::::::::TI::::::V:S:TL:RT:L::L:E::::V::R NP4128A TAL:::R:::::::::::::::::::GAV::::TYGV:TD:::::V::::VY::::T:D: Hmu1230 ELA::V:::::::::::::::::::DRTV:::::::V:T:E:R::R:::L:::I::::DD consensus RDEGIGSALLAAAEAELRDAGADAVALEALADNEAARRFYRRHGYDPHRVELEKS----- #oth .34.2.25..44..53.4641124241221.3.32.141.242..42..13212311111 HQ2961A :GA:::TQ::C:::DK:HNQ::TVIT::T::E:TR:QE:::Q::::A:::QF:RT::::: VNG1215 :GD:R:::::TH::R:::SR::::L:I::::::A::::L:E:R::A::::TF:Q:::::: hla1694 ::::V:AD::D:::RA::E:::E::::::::A:DR::E::AEQ::E::::::T::PTAGG rrnAC0113 :NQ::::E::DT::EL::Q::::IL::::M::::S::Q:::A:::A:::I::::P::::: HVO_2804 ::A:V:TR::::::DA:A:::V:::::DV::::::::::::::::R:::::::::::::: Hbo2536 :SR::::R::KS:::::AG:::THIC:::M:R::R::K::E::::TV:::::::A::::: Hut1466 ::::::TK:::E::TA::EE::TV:V:DV::::::::E:::AR:::::::TV:::::::: NP4128A :G:::::::::::::::DAD:::::G:Q:M:::::::S:::D:::T::::::::A::::: Hmu1230 :NQ:::T:::::::S::V:RD::C:T:::M:::D:::::::::::::::IAF:::::::: consensus IENDTHSK-D-------- #oth 524224333131111111 HQ2961A LDFTEEN-:-:::::::: VNG1215 V:::::::D:P::::::: hla1694 Q:GAGKNSG:GDDDDRGT rrnAC0113 T::::L--:-:::::::: HVO_2804 MRS:::::E:G::::::: Hbo2536 ::::::::E:R::::::: Hut1466 ::S::P::G-:::::::: NP4128A :RT::LKTD:G::::::: Hmu1230 T:S::L--:-::::::::