| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1369 | hla1299 | HQ2417A | rrnAC0034 | Hut0168 | VNG1360 | Hbo2640 | HVO_2874 | Hmu1079 | NP3788A |
| 837 | hla1299 | 1609 | 620 | 566 | 638 | 434 | 620 | 677 | 656 | 685 |
| 929 | HQ2417A | 620 | 1729 | 669 | 620 | 472 | 860 | 827 | 766 | 786 |
| 884 | rrnAC0034 | 566 | 669 | 1414 | 713 | 442 | 734 | 727 | 759 | 766 |
| 840 | Hut0168 | 638 | 620 | 713 | 1332 | 438 | 677 | 625 | 796 | 735 |
| 647 | VNG1360 | 434 | 472 | 442 | 438 | 1289 | 600 | 560 | 602 | 614 |
| 1011 | Hbo2640 | 620 | 860 | 734 | 677 | 600 | 1665 | 878 | 818 | 907 |
| 1048 | HVO_2874 | 677 | 827 | 727 | 625 | 560 | 878 | 1614 | 823 | 889 |
| 1030 | Hmu1079 | 656 | 766 | 759 | 796 | 602 | 818 | 823 | 1384 | 881 |
| 1068 | NP3788A | 685 | 786 | 766 | 735 | 614 | 907 | 889 | 881 | 1451 |
252 symbols consensus MEFTLLGWPPDGPTLRLDYRRFAYAGKFVMSSTGKAVLR-----------------D--- #oth 22363312143132131122411.1.1114333.13143111111111111111114433 hla1299 ::YA:V:G:DS:T:::::::A::::::::VGAP:::::::::::::::::::::::TSDG HQ2417A ::::V:::::EA::::::::S::::::::L::V::::::TEDSSEIFTSPEAHAHV:ANE rrnAC0034 :::::::::E::HR:::::KQ:::::::::T::::::IG:::::::::::::::::-::: Hut0168 V:YSIR:::A:::::N::HE:::::::::I:T:::::V::::::::::::::::::A::: VNG1360 -------MSNT:-------KAV::E:A-PLAKR:DDWPP::::::::::::::::::::: Hbo2640 :Q:VV::::D:::::::::::::::::::::::::::VV::::::::::::::::::RWD HVO_2874 :::D:::::E:::R:::::::::::::::TAA:::T:::::::::::::::::::::PDD Hmu1079 :::V:::::::::::E::::T:S::::::::A:::S:A::::::::::::::::::E::: NP3788A ::PE::::::::::::::::Q:S::::::::::::::V:::::::::::::::::::P:: consensus ----------------------DDDVVAAVAFNADRTDPDTLWLRYVTVREDRRGEGLGP #oth 1333333332222544454434244111.41.23...1342223..11.161121321.2 hla1299 SPAVPEWEPDEPLPPTVEASEF:::::::IS:SS::::::CCR::::::HVA::A::::: HQ2417A SDRGQSMHADANTNHPTESDPY:HS:L::LS:S:::::DT::CY:::S::S:K::S:::: rrnAC0034 ::::::::::::::::::::::::G::::A::D:::::::::CV::I:::Q::Q:DR::A Hut0168 ::::::::::::::::::::::::AI:::A::DT::::E:C:R::::::::::::::I:S VNG1360 :::::::::::::::ARAADDPV::::G::S::E::::AHAA::::::::G::::A:I:A Hbo2640 :::::::::::::TRSVPSSEY:RG::::T::::::::AS:::I::::::G::K::T::: HVO_2874 SLPPLDDDRPAPTGGPDSLPPLAE:::::::::E:::::T::::::::::R::::D:::: Hmu1079 :::::::::::::::::::::::GEI:::::::E::::ET:::::::::::::::::I:: NP3788A :::::::::::::SGADTERDF:::I:::::::::::A:E::::::::::A::::::::: consensus RLLRFVVARAADRGYDTVRIAVNNPFAYEALYKAGFAYTGEETGIAELVLERPA--PA-- #oth 2.33234431643122522111..111.2.5122.1321.331.3...213223342121 hla1299 ::IDRT:::L:AD:::R:K:::::S:::A::::C:::::::N::::::::::S:GE::AG HQ2417A ::AASLTPH:V:::::RL::::::::::::M:R::::W::R:::::::::::::EI:::: rrnAC0034 ::::::RE::TE::FEH:S:G:::::S:Q:A:R:::CFS:A:S:M:::D:VW:G::--:: Hut0168 :::::::E::RE::::E:KAG::::V::::F::G:L:::::Q::L::::CSTT:::--:: VNG1360 ::CA:AA:HLLGD-HEC::::::::::::::H::::GF::Q::::::::::::C::--:: Hbo2640 Q:CA::ADA:QGE::E::K::::::::::::H::::SW:::T::::::::::::DTH::: HVO_2874 D:::RTCD-::::::E:::::A::::::::CH::::GF::R:::V:::::::::GA:::: Hmu1079 :::S:TRS::::S:::SL::::::::::::G:C::::::::T::::::::AW:G::--:: NP3788A ::C:::::::ER:::A:AK:::::::::::::R::::::::T::::::I::::TDA::P: consensus -DRSRERYQAGLDRYRE--RDLDPPERAFLAARRGADPPALVAGPS-------------- #oth 1442625.13..331.311..1234164.2342454511366666655432222111111 hla1299 D:A:GG::R:::RAF:DGD:::::A::E:I:::L:ERGESGES:ERKE:::::::::::: HQ2417A :TTTY:Q::S::TE::K::::Y:D::ST:::N:QET:::::HTAVNSTQ::::::::::: rrnAC0034 ::::T::::::::LF:::::::S:D:ES::::KAD::::TVLNEWAEQPSARTD:::::: Hut0168 :E:RPG::R:::EA::::::::SETDQR:VDD:ASGG::SVIDS:E:::::::::::::: VNG1360 :EHRAAG::D::::::::::::S:E:A:::DRT:::S:::R:EW--:::::::::::::: Hbo2640 :V:T::E:::::::::D::::::D::S:::TG:EN:::::::V:SGSGSGSGSGSDSDSD HVO_2874 :AV:::A::S::::::A::::::D:::::::::E:VE::EID::H:DD:::::::::::: Hmu1079 ::::PA::RS::E:::::::::S:E:V:::DD::::::::T::V::PDGV:::::::::: NP3788A ::::K:T::R::::::::::::EQA:T:::RRK:Q:T::EPTD---:::::::::::::: consensus ------------ #oth 111111111111 hla1299 :::::::::::: HQ2417A :::::::::::: rrnAC0034 :::::::::::: Hut0168 :::::::::::: VNG1360 :::::::::::: Hbo2640 FVGVMSNADTGR HVO_2874 :::::::::::: Hmu1079 :::::::::::: NP3788A ::::::::::::