|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2802 | VNG0376 | HQ1243A | hla2423 | HVO_0717 | Hbo0819 | NP0810A | Hut1589 | rrnAC0703 | Hmu0927 |
2315 | VNG0376 | 2891 | 2214 | 2344 | 2220 | 2242 | 1974 | 1919 | 1963 | 1960 |
2350 | HQ1243A | 2214 | 3182 | 2338 | 2318 | 2389 | 2008 | 1944 | 1969 | 2012 |
2427 | hla2423 | 2344 | 2338 | 2811 | 2376 | 2354 | 2048 | 2043 | 2041 | 2076 |
2394 | HVO_0717 | 2220 | 2318 | 2376 | 2743 | 2458 | 2027 | 1972 | 2054 | 2033 |
2427 | Hbo0819 | 2242 | 2389 | 2354 | 2458 | 2826 | 2072 | 2037 | 2077 | 2094 |
2289 | NP0810A | 1974 | 2008 | 2048 | 2027 | 2072 | 2840 | 2401 | 2444 | 2440 |
2266 | Hut1589 | 1919 | 1944 | 2043 | 1972 | 2037 | 2401 | 2843 | 2527 | 2541 |
2347 | rrnAC0703 | 1963 | 1969 | 2041 | 2054 | 2077 | 2444 | 2527 | 2822 | 2603 |
2323 | Hmu0927 | 1960 | 2012 | 2076 | 2033 | 2094 | 2440 | 2541 | 2603 | 2856 |
451 symbols consensus MDSIVDDAIDEAEED---GEDDA-------GEPVDE----TGTTAADINTSGTMTDEELA #oth ....13..11..144111344341111111434755221544355455641.1.1.2..3 VNG0376 :::::Q::::::::-:::S::S::::::::S::A:V::::-AGGGG:TVPT:::::N::E HQ1243A :::::::::::::KT::::GG::VDGAAVEA::ES:STAD::A:NDGLSQ::::::D::Q hla2423 :::::E::::::::S:::PV::S:::::::::AGAG:::EN:A::GAPPQT:::::D::Q HVO_0717 :::::G:::::::AE:::DMG:E:::::::SAQ::G::::----::N::R::::::D::K Hbo0819 ::::::::::::::T::::DGRT:::::::VGGLEN::::---DSEQ:RR:::::::::K NP0810A ::::IE::::::::::::::ASS::::::::DATPTDSADA:::D::VKS:::::::::: Hut1589 ::::I:::ME::DD::::P:ESP:::::::V:GN:::::P:D:A:EEPA:::Q::::::: rrnAC0703 ::::I::::::::Q:::::::A:::::::::GT::::::T:S:PSQ:MS:::::S::::: Hmu0927 ::::I:::::::::EREG:DPAS:::::::EG:DQD:::QSS::PDAT:::::::::::: consensus DVLKDLQTKITVVGCGGAGGNTVTRMHEEGIHGAKLVAANTDVQHLV-EIEADTKILMGE #oth 3.121.1.2.....1....1...2..321..2..2.......1...12214111...1.3 VNG0376 :::QE:::N::::::::::S:::D::AT::::::D:::::::::::::D::::::::::Q HQ1243A :::E::::D::::::::::::::D:::Q:::E::T::::::::::::::::S:::::::: hla2423 :::Q::::N::::::::::::::N::T:::::::::::::::::::::N::::::::::Q HVO_0717 A:::::::N::::::::::::::N:::::::K::::::::::::::::::G::::::::: Hbo0819 N::Q::::D::::::::::::::N:::::::K::::::::::::::::::D::::::::: NP0810A S:V:::::::::::::::::::::::A:A:::::::::::::A:::AT:V:::E:::I:R Hut1589 ::VE::E:::::::A:::::::::::M:::::::::::::::A:::AD:VK::::::I:K rrnAC0703 S:V:::E:::::::::::::::::::M:::::::::::::::A:::AD:VA:N::::I:R Hmu0927 ::V:::E:::::::::::::::::::M:::::::::::::::A:::AD:VK::::::I:K consensus QKTQGRGAGSLPQVGEEAAQESQEEIQDSIDGSDMVFVTAGLGGGTGTGSAPVVAKAARE #oth 11.2......1.11.....2.2211.321.2......1...........1...1.1..11 VNG0376 :::K:::::::::::::::I:::G::R:::A::::::::::::::::::::::::::::: HQ1243A :::::::::::::::::::I::::::YNA:E::::::::::::::::::::::::::::: hla2423 :::::::::::::::::::I::::::::A::::::::::::::::::::::::::::::: HVO_0717 :::::::::::::::::::L::::::Y:A:E::::::::::::::::::::::::::::: Hbo0819 :::::::::::::::::::L::::::Y:A:E::::::::::::::::::::::::::::: NP0810A :R:G::::::V:KI:::::::NL:D:TN:::::::::I:::::::::::::::::Q::QD Hut1589 KR:G::::::V:KI:::::::NI:D::Q:::::::::::::::::::::A:::I:Q::QD rrnAC0703 KR:G::::::V:KI:::::::DI:D::Q:::::::::::::::::::::A:::::Q::Q: Hmu0927 KR:G::::::V:KI:::::::NI:D::Q:::::::::::::::::::::A:::::Q::Q: consensus SGALTIAIVTTPFTAEGEVRRTNAEAGLERLRDVSDTVIVVPNDRLLDYVGKLPVRDAFK #oth 32....1...1.......1..1..1.......2.1.....1.......21121.112... VNG0376 Q:::::::::::::::::::::::::::::::::A:::::::::::::S:::::::E::: HQ1243A :N::::::::::::::::::::::::::::::::A:::::::::::::S:::::::Q::: hla2423 ::::::::::::::::::::::::::::::::::::::::::::::::S:::::::Q::: HVO_0717 ::::::::::::::::::::::::::::::::::::::::::::::::A:::::::Q::: Hbo0819 C:::::::::::::::::::::::::::::::::A:::::::::::::A:::::::Q::: NP0810A Q:::::::::I:::::::R::A::D:::::::A:A:::::I::::::::APNM:LQ:::: Hut1589 ::::::S:::I:::::::R::A::D:::::::A::::::::::::::::APSM:LQ:::: rrnAC0703 A:::::S:::I:::::::R::A::D:::::::S::::::::::::::::APSM:LQ:::: Hmu0927 :D::::S:::I:::::::R::A::D:::::::A::::::::::::::::APSM:LQ:::: consensus VSDEVLMRSVKGITELITKPGLVNLDFADVRTVMENGGVAMIGLGESDSENKAQDSVRSA #oth 11.1........1.....1.....1.....1.1.12..........1..12..11.12.. VNG0376 :::::::::::::::::::::::::::::::::::K::::::::::A::DA::A:::Q:: HQ1243A ::::::::::::::::::::::::::::::K:::QR::::::::::::::S::::::K:: hla2423 ::::::::::::::::::M::::::::::::::::K:::::::::::::DS::::::K:: HVO_0717 ::::::::::::::::::::::::::::::K::::R::::::::::::::S:::E::K:: Hbo0819 ::::::::::::::::::::::::::::::K::::R:::::::::::::DS::::::K:: NP0810A IC:R::::::::M:::::::::::V:::::K:I:::::::::::::::::::::::I::: Hut1589 IC:R::::::::M:::::::::::V:::::::I:::::::::::::::::::::::I::: rrnAC0703 IC:R::::::::M:::::::::::V:::::::I:::::::::::::::::::::::I::: Hmu0927 IC:R::::::::M:::::::::::V:::::::I:::::::::::::::::::::::I::: consensus LRSPLLDVDISGANSALVNVTGGPDMSIEEAEGVVEEIYDRIDPDARIIWGTSVDEELDG #oth ........1111.1......2..21...........1111..1........1.1152321 VNG0376 :::::::::::S::::::::::::G:::::::::::QL:::::::::::::::I::QIQE HQ1243A :::::::::::S::::::::A::S::::::::::::::HN::H::::::::::::DD::: hla2423 :::::::::::S:::::::::::T::::::::::::::::::::::::::::::::::E: HVO_0717 :::::::::::::::::::::::S:::::::::::::::::::::::::::::::D::E: Hbo0819 :::::::::::::::::::::::S:::::::::::::::::::::::::::::::::::: NP0810A ::::::::EFD::Q::::::V::::::::::::::::::::::::::::::A:::P:F:: Hut1589 ::::::::EFD:::::::::V::::::::::::::::::::::::::::::A::NHDY:: rrnAC0703 ::::::::EFD:::::::::V::::::::::::::::::::::::::::::A::NN:FE: Hmu0927 ::::::::EFD:::::::::V::::::::::::::::::::::::::::::A::NQ:FE: consensus KMRTMIVVTGVESPQIYGRS---------------------------------------- #oth 4.1..1.....1......313421111111111111111111111111111111111111 VNG0376 E::::V:::::D:::::::NEAA::::::::::::::::::::::::::::::::::::: HQ1243A T:::::::::::::::::S:DTAAQSNAQGVEGMRVDTDGNGRVNAAESVETDTGSNAET hla2423 E::::::::::::::::::NGE:::::::::::::::::::::::::::::::::::::: HVO_0717 M::::::::::::::::::N::G::::::::::::::::::::::::::::::::::::: Hbo0819 T:::::::::::::::::::DGG::::::::::::::::::::::::::::::::::::: NP0810A ::E:::::::::::::::K::::::::::::::::::::::::::::::::::::::::: Hut1589 Q:E:::::::::::::::K::::::::::::::::::::::::::::::::::::::::: rrnAC0703 ::E:::::::::::::::Q::::::::::::::::::::::::::::::::::::::::: Hmu0927 ::E:::::::::::::::Q::::::::::::::::::::::::::::::::::::::::: consensus -EAE--REKAAPQLG---------EDIDYVE #oth 1122325264234541111111112.1.111 VNG0376 ::GDGPAQEST:EPEPEPQAGSEI::::::: HQ1243A D:::TATRTEV:FPD:::::::::::A:FI: hla2423 :S::::G:GET:EM-:::::::::::::::: HVO_0717 :::-::-QAH:EERL:::::::::::::::: Hbo0819 ::G:PA:QPQ:::Q::::::::::Q:::::: NP0810A ::V:::::R::AGD-:::::::::D:::::: Hut1589 :::::::::::QRM::::::::::D:::::: rrnAC0703 ::::::Q::::Q::::::::::::::::::D Hmu0927 :::::::::::Q:::::::::::::::::::