|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 915 | HQ1336A | VNG2054 | hla0880 | HVO_1900 | Hbo1778 | rrnAC2828 | Hmu3133 | NP5082A | Hut2928 |
610 | HQ1336A | 1545 | 412 | 501 | 501 | 536 | 525 | 518 | 509 | 507 |
553 | VNG2054 | 412 | 931 | 496 | 494 | 452 | 483 | 453 | 478 | 421 |
647 | hla0880 | 501 | 496 | 1105 | 584 | 510 | 476 | 482 | 530 | 481 |
664 | HVO_1900 | 501 | 494 | 584 | 937 | 729 | 529 | 524 | 542 | 539 |
658 | Hbo1778 | 536 | 452 | 510 | 729 | 1040 | 502 | 513 | 544 | 547 |
652 | rrnAC2828 | 525 | 483 | 476 | 529 | 502 | 926 | 697 | 522 | 580 |
681 | Hmu3133 | 518 | 453 | 482 | 524 | 513 | 697 | 924 | 542 | 580 |
665 | NP5082A | 509 | 478 | 530 | 542 | 544 | 522 | 542 | 896 | 602 |
668 | Hut2928 | 507 | 421 | 481 | 539 | 547 | 580 | 580 | 602 | 907 |
237 symbols consensus ----------------------------MAVVLDTNALMMPVECDVRLFEELDRLL-GEY #oth 111111111111222222222122212354232.11..12.11531.2.2....224353 HQ1336A :::::::::::::::::::::::::::MI::I:::::::L:::R::::::::::I:TES: VNG2054 :::::::::::::::::::::::::::MQ::AI:::::LL:ATQPL::::::::::::D: hla0880 VADDARADGPESTSAGDARPEDLAGDDAPV:A::AS:::A:::A:L::::::::::::G: HVO_1900 ::::::::::::VT:::::::::::::ATV::M::::::::::L:::V:D::::::AADA Hbo1778 ::::::::::::VTTETRHRTDSDTDATTT:::::::::::::L:::V:D::::::AANV rrnAC2828 ::::::::::::::::::::::::::::-MI:::::::::::::N:::::::::V:PDAT Hmu3133 ::::::::::::::::::::::::::::-MIL::::::::::::N::::A:::::GFD:T NP5082A :::::::::::::::::::::::::::::R:::::::::A:::VG::T:A:::::::::: Hut2928 :::::::::::::::::::::::::::::TA:::::::::::::N::V::::::VI:::T consensus DAVVPAAVVAELDKLSAGAGEEATAASVGADLADR-CRVVETEADYADDAVVELAREGDV #oth 2411.52.34..44.23.2.5112..1..4..23121433224232....221.254452 HQ1336A ISL::RP:::::HH::D:::V:::::N::S::L::::SIID::::F::::I::::TTET: VNG2054 :::::Q::HD::VA:A:::::T:S:::::V:::TDR:GTLR:DVS:::::LHA::VSE:: hla0880 E::::::::S:::R:QG:N:K::::::::S:::T::AET::::ES:::::L:::VT::R: HVO_1900 :L:::T::LD::E:::S:G:T:GV:::::::::T::::A::::ES::::::::::ES:E: Hbo1778 :L:::S:::G::E:::::::N:GV:::::::::ADR::::D:::T::::::::::ER:F- rrnAC2828 :Y:A::::RD::A::AD:::A::::::::Q::L::::AIR::T::::::::L:::QTD:A Hmu3133 :CL::RS:L:::::::::::A::::::::R:::::::S:R:AA::::::::::::GDD:: NP5082A E::::Q:::E::ES::G:G::::::::::::::E:E:A:::HN:E:::::::::G::A-- Hut2928 :L:::E:::::::R::D:G::::::::::R::VE::::::DHD:TN:::::L:::::LE- consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 HQ1336A LGQTEICADTTAVDSTHNHQSGEKDIGTHTNVHNNIHAGRQINVEADAHSDDRNADLIEI VNG2054 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0880 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1900 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1778 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2828 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu3133 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP5082A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2928 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ----------------------DYVVTNDRPLRRRLLDAGVPVIGLRGRNKLAITEP #oth 1111111111111111111111331..2.5..2411123231.121..13214..2. HQ1336A SDRESTAEATTEIAEDEYSTIKQ::::E:::::N::YEHD:R:::I::::T:E:::: VNG2054 :::::::::::::::::::::::A:::::G::KE:V::::T:::H::::TQ:T::R: hla0880 :::::::::::::::::::::::G::::::::AN:V:E::A:::::::::T:::::: HVO_1900 :::::::::::::::::::::::::::::K:::D:V::C:I::V:I::HAT:::::: Hbo1778 :::::::::::::::::::::::::::::K:::D:::ER::R:::I::HH::D:::: rrnAC2828 ::::::::::::::::::::::THA::::N::K:::::::::::S:::::::G::Q: Hmu3133 ::::::::::::::::::::::THA::::A::K:::::R:::::S::::::::::Q: NP5082A ::::::::::::::::::::::::A::S:M:::E:::E:N::::S::::T:FE:::: Hut2928 ::::::::::::::::::::::A:A::::G:::QA::A:D:::::::::::::::Q: