|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1929 | hla0705 | Hbo3733 | HQ1840A | VNG2158 | HVO_0296 | NP1294A | Hut2326 | rrnAC2741 | Hmu2844 |
1470 | hla0705 | 1921 | 1397 | 1302 | 1130 | 1136 | 1255 | 1260 | 1244 | 1216 |
1436 | Hbo3733 | 1397 | 1961 | 1497 | 1038 | 1086 | 1189 | 1171 | 1173 | 1114 |
1374 | HQ1840A | 1302 | 1497 | 1940 | 1008 | 1064 | 1093 | 1191 | 1158 | 1131 |
1243 | VNG2158 | 1130 | 1038 | 1008 | 1907 | 1257 | 1046 | 1141 | 1048 | 1058 |
1398 | HVO_0296 | 1136 | 1086 | 1064 | 1257 | 1925 | 1195 | 1229 | 1262 | 1183 |
1475 | NP1294A | 1255 | 1189 | 1093 | 1046 | 1195 | 1933 | 1317 | 1279 | 1282 |
1556 | Hut2326 | 1260 | 1171 | 1191 | 1141 | 1229 | 1317 | 1920 | 1485 | 1476 |
1571 | rrnAC2741 | 1244 | 1173 | 1158 | 1048 | 1262 | 1279 | 1485 | 1936 | 1568 |
1535 | Hmu2844 | 1216 | 1114 | 1131 | 1058 | 1183 | 1282 | 1476 | 1568 | 1933 |
265 symbols consensus MDLELDGNAALVTASSSGLGLASAEALAREGANVVVCGRDEERLDAAREEL--EAADDGD #oth .2.313112112..211...3..14...42.12.1311.232114414332224143413 hla0705 :::QI:::::::::::::::K:::K::::::V:::IN:::::::A::K::I::::VAT:E Hbo3733 :N::IA::::::::::::::N:::R:::Q::V:::MN::::D::ES:VA:VQAD::::AT HQ1840A :::::TD:V:::::::::::K::GR:::S::::::LN::NQD:::::V::VREA:::TAS VNG2158 :E:G:::DV:V:::::::::K:::A:::::::D::::S:::::VV::A::I::G:DAA:S HVO_0296 :E:G:::DTVV:::::A:::R:::A:::D:::::::::::P:::A:TES::::-GDL::: NP1294A :::DI:::::::::GTA::::::::::::N::::A::::::D::SR:EAK:::::I:G:: Hut2326 :::Q:E::V::A::AT::::::::::::AD:::::::::TA:::ES:::Q:::A::GP:: rrnAC2741 :::::::::::C::AT::::::::::::AD::::A::::TP:HV:E::NR:::::VG::: Hmu2844 ::::::::V::C::AT::::::::T:::::::H:A::::TASHV:D:::Q:::::TG::: consensus VLAVEADITDPDDVAALVEETVEEFGGLDHVVTSAGGPPSGPFLDTTDDDWYDAYDLLVM #oth .31342.1.15342222.2421321122..111....12115.3322222.25.111... hla0705 :V:QP::L::A:E::::::A::D:::TI::L::::::::::A::::D:E::QH:F::::: Hbo3733 :VGQTG:L:::E:IE::::RP:::::R:::L::::::::::::ME:::::::E::::::: HQ1840A :IGHAG:L:::::I:D:::RP:A:::::::LIL:::::::K:::E:::EE::E:F::::: VNG2158 :RG:P:::::GA::::V::TA::T:::::::::::::V:::Q:TAV:::::T::FE:::: HVO_0296 ::G::T:::NKG::E::::AA::::::V:::::::::V:P:G:A:L:ERE::G:F:M::: NP1294A ::::Q:::::REALQGF:GK:I:T:D:::::::::::::::S::::D:E::::::::::: Hut2326 :R:I::::::::H:E:::A::::T::::::L::::::::::S::::PT:A:::::::::: rrnAC2741 ::::::::::::QIE:::::::DS::::::::::::::AP:::ME::ERE::S::::::: Hmu2844 ::::::::::Q:H:::F:::::G:L:::::::::::::S::D::S:::::::Q::::::: consensus SVVRTVRAAYPHLRESDGGTIVNITSRSVKEAIDDLVLSNAVRRGVIGLMKTLSRELAPE #oth .1.12313.521.52223.1111...2..3.2112.1...1..12.1..3.1313.21.2 hla0705 ::::LA:E:::::K:G::::::::::::::::::S:::::S::M:::::E::::K:F::: Hbo3733 ::::S::::AD:::AG::::::::::::::::::G:::::S::M:::::E::::K::::: HQ1840A :A:::::::E:::T::EH::::::::A:::::::G::::::::MS::::E::I:K::::D VNG2158 :::::LD::HE::VAG::::VTC:::T::S:P:EG:::::::::::V::A::VA::W::D HVO_0296 :A:W:::::R:::EA::V:::TC:::T::::V::::I::::::::::::V:S:::::::G NP1294A :::::::S:L:T:A:DG:::V::::::::Q:VM:::::::S:::S::::::S::H::G:: Hut2326 :A:::T:::::::K:::V:S:::::::::R:V::::::::::::A:::::::QA::F::D rrnAC2741 :::W:T::::::::D::A:::::::::::R::::::::::::::A:::::::QAN:F::: Hmu2844 :A:W:T:F::::::D:EA::V::::::::R:V::::::::S:::A:::::::QA::F::: consensus VRVNAVLPGAHETPRIEELVEAAVERGEYDSYEEGLDDWADGIPLGRIGDPRELGDVVAF #oth 1.1.1.1..3...2..21.1221.2.11212..4.233.2342.331212.31..31..2 hla0705 I:A::::::P:::S::RD:::::::::D::::::::::::QN-::::::::M:::NT::: Hbo3733 ::A::::::S:::::::::I:QG::::::ED::D:::::GQ:::V:H::::MD::RT::Y HQ1840A I:A::::::T:::::::::::QG:::D::E:::S::EE::::::I::V:::M:::RT::: VNG2158 ::A:V:Q::P:::A::::::S:::A:::A::::A::AG:SEEV::D:L:E:S:::::::: HVO_0296 :::::::::::::S:::::::::::::DH:T::::::S:S:::::::V:::::::::::: NP1294A :::::::::::::S:::::::D:::::D::D::A:::::SE:V::E:V:::::::ET::W Hut2326 :::::::::::::A:::::IDD::::::::::::::A:::ADV:M::::E:::::::::: rrnAC2741 :::::::::::::::::::::::::::::::::::IKS:::A-::Q:V:R:E:::::::: Hmu2844 ::::::::::::::::Q::I:D::S::::::::Q:RAE:S:A-:::::A::::::::::: consensus LSSPRSSYVTGAALPIDGGSMRS-- #oth .1.3313123.232.1...234231 hla0705 ::::K:G:IN:T::::::::TGANL Hbo3733 ::::Q:E:IN:V:V::::::GA:NL HQ1840A ::::V:T:LD:V:I::::::GA:NL VNG2158 :A:D:A:F::::SV:V:::RLWG:: HVO_0296 :A:D:A:F::::CV:V:::RL::A: NP1294A :::E:A:::S::T::V::::T::V: Hut2326 :::::A:FL::::I::::::::::: rrnAC2741 :::::::::::T:::V:::A:Q::: Hmu2844 :::A:::::::T:::::::::::::