|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1552 | VNG1798 | HQ3320A | HVO_2343 | Hbo2024 | rrnAC3352 | Hut0749 | Hmu2226 | hla1302 | NP4518A |
1033 | VNG1798 | 1492 | 778 | 823 | 834 | 934 | 910 | 975 | 969 | 858 |
1084 | HQ3320A | 778 | 1565 | 1094 | 1230 | 917 | 890 | 987 | 948 | 799 |
1159 | HVO_2343 | 823 | 1094 | 1569 | 1228 | 887 | 945 | 1042 | 981 | 850 |
1227 | Hbo2024 | 834 | 1230 | 1228 | 1564 | 1001 | 1003 | 1086 | 1013 | 899 |
1185 | rrnAC3352 | 934 | 917 | 887 | 1001 | 1997 | 1054 | 1041 | 1031 | 1176 |
1184 | Hut0749 | 910 | 890 | 945 | 1003 | 1054 | 1580 | 1095 | 1049 | 933 |
1289 | Hmu2226 | 975 | 987 | 1042 | 1086 | 1041 | 1095 | 1506 | 1113 | 972 |
1289 | hla1302 | 969 | 948 | 981 | 1013 | 1031 | 1049 | 1113 | 1709 | 1174 |
1103 | NP4518A | 858 | 799 | 850 | 899 | 1176 | 933 | 972 | 1174 | 1553 |
256 symbols consensus ----------------------------------------------------MKIRQNIR #oth 1111111111111111111111111111122212222122222222222222..12.131 VNG1798 ::::::::::::::::::::::::::::::::::::::::::::::::::::::L:::L: HQ3320A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2343 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2024 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC3352 MPSPMITCDVLMYGRYEIRPNVDCYLRIVSDSELNTPIVGDLKALGPVFEIE:::Y::P: Hut0749 :::::::::::::::::::::::::::::::::::::::::::::::::::::::K:SVK Hmu2226 ::::::::::::::::::::::::::::::::::::::::::::::::::::::L:::VK hla1302 :::::::::::::::::::::::::::::VPLEHREAIASPQIQGRRLPTKP:::::::: NP4518A ::::::::::::::::::::::::::::::::::::::::::::::::::::::LY::P: consensus HFAAKKALTMPVVGDIANDKLVDLHTSIFLDKADEDRREERRAHLDDFFDATMDTYVAAL #oth .1.2111.14.2213313331.21.141.342.224222..1311241.121212.12.. VNG1798 :::SQ:::EV:GLR:VVH:::::I:::::::::T:A::D::E::::G::::S:EM:LV:: HQ3320A :::::::::::II::::TQ::::::V:::GK:::PEY::::EP::ET:::C:FE:::R:: HVO_2343 :::T::::::::I::::TE:M::::VR::SER::P:::G::ED:MAA::EC:F:::L::: Hbo2024 :::::::::::::::::T::::G::VRV:GE:::P:H::::EP:MEA:::C:F::::::: rrnAC3352 :W:S:::::T:G:RSV::YG::K:::K:::G::::AH:::::D:::::::G::::::::: Hut0749 :W:::QS::A::::EMVS::::::::GV:::W:E:N:Q::::ER:EG::::::::::::: Hmu2226 :::::Q:::L:::::AV::R::::::NV:A:::EPG:AD::::::::::::::::::::: hla1302 :W:::::::T:::::V::::::::::::::N:::::::::::::::S::::::::::::: NP4518A :W:S:Q:::T:GLRGA::YA::K:::K:::G:::A:::::::D::::L::::I:A::::: consensus EAGFPEAEAREITHIQANFDFYNHGWTEMMEFPADELEAHYERYEDFFERHGITIDDPLG #oth 22232..2......21.....1.........1.21.223..2.112..4413.1.13... VNG1798 QS:L:::Q:::::::V:::::::::::::::::G:::RD::D:HA:::DE:D::::N::: HQ3320A :E::T:::::::::::::::::::::::::::::E:::T::::::E::N:YN:D:AS::: HVO_2343 D:::::::::::::V::::::::::::::::I:V::I::::::::E:::::::D:AE::: Hbo2024 :S::S::K:::::::::::::::::::::::::::::::::::::E::Q:YD:D:AN::: rrnAC3352 ::EYS:::::::::::::::::::::::::::::::::::::::A:::DA:S:::::::: Hut0749 :E:H::::::::::A::::::::::::::::::VE:V::::D::A::::S:::::::::: Hmu2226 D:::::::::::::V::::::::::::::::::V:::AD::::::S::::YD::::E::: hla1302 ::::::::::::::V::::::F:::::::::I:G::::P::R:::S::GD:::::::::: NP4518A ::DYT::::::::::::::::F:::::::::I::::::P::R:::S::QE:::::::::: consensus EFRPADGIPEAPSTPEKLDDPEHPHAEGGFADDVYVETDDGEIVVGGQ-EEPEDVDPSAA #oth 3.31331233.22.121.3312211.41..1......121.15521.4322.22.21222 VNG1798 A:Q::::::D::A:::::A:ADFEN:AA::E::::::::::--IQK:GVD::D::::EDS HQ3320A D:KTQN-:IA:S:::GR:NN::::::::::::::::::ES::LT:::::T::DT:NVED: HVO_2343 :::TI:-::D::A:LD:::::D:::::::::::::::D:S::VG:::A:D::::::V::: Hbo2024 D::TQ:-:::::::::::::::::::V::::::::::DES::LH::::::::::::V::: rrnAC3352 T::::G:VTD::::::R::E::::::V:::::::::::E:::ML:::GR:::D::S:TD: Hut0749 A:A:EG:L:::::::::::::D::::I:::::::::::E:::::I::G::K::E::VEE: Hmu2226 T:A:::::T:::::::::::::::::::::::::::::::::::::::::::T:::::E: hla1302 :::::E::V::TE:::::ET::YEN:LA::::::::::::::T::::ET::::E:::::: NP4518A :::::G:LTS::E::::::E:AFEN:IA::::::::::A:::T::::DT:P::::::T:V consensus PGVDDDDVDA------ #oth .244343455434421 VNG1798 :FAE------:::::: HQ3320A ::LQ:V:T:TDETTEA HVO_2343 ::MQ:V:RTDERTA:: Hbo2024 :::N:T:::ESEA::: rrnAC3352 :VI:E:::ESAAGD:: Hut0749 ::::P:A:EDAEIEG: Hmu2226 :::GE-----:::::: hla1302 ::L:E:EAS::::::: NP4518A :::::EEAQ:D:::::