|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1577 | HQ3205A | NP3200A | VNG1859 | Hut2088 | hla1121 | HVO_2610 | Hbo2238 | rrnAC3429 | Hmu2348 |
1100 | HQ3205A | 1612 | 942 | 844 | 836 | 1025 | 1035 | 1062 | 749 | 849 |
1148 | NP3200A | 942 | 1600 | 912 | 920 | 998 | 1043 | 1050 | 865 | 881 |
1077 | VNG1859 | 844 | 912 | 1569 | 900 | 986 | 1010 | 1025 | 759 | 847 |
1146 | Hut2088 | 836 | 920 | 900 | 1585 | 889 | 1007 | 1037 | 1001 | 1037 |
1221 | hla1121 | 1025 | 998 | 986 | 889 | 1619 | 1126 | 1215 | 812 | 936 |
1329 | HVO_2610 | 1035 | 1043 | 1010 | 1007 | 1126 | 1565 | 1332 | 881 | 953 |
1384 | Hbo2238 | 1062 | 1050 | 1025 | 1037 | 1215 | 1332 | 1577 | 876 | 1021 |
1000 | rrnAC3429 | 749 | 865 | 759 | 1001 | 812 | 881 | 876 | 1760 | 1099 |
1083 | Hmu2348 | 849 | 881 | 847 | 1037 | 936 | 953 | 1021 | 1099 | 1621 |
238 symbols consensus MDRDDLAARIDHTVLGPETTPADVETVLDEAAEYGMNACIPPCYVAEASE---YA-PDVT #oth 122323231.1......1.2421.432122.432.111.1..11134.511112233323 HQ3205A :NIEE::::::::::::T::MDE:TD::SD::A:::::::::::LDA:GDTDMVTDSG:: NP3200A ::::TF:::::::::::::A:G:::A:::A:::::::::V:::::EA::D:::::::::: VNG1859 :::ET::::::::::::T::R:::LS:V:D:EAH:::V::::::::D:RD:::H:SA:R: Hut2088 --M::ILS::E::::::::::::::A:::D:S:::LR:::::::LEL:G::::::::::E hla1121 ::::EF::S:::::::::::WG::::I:N:::DH::::::::::LP::AD::::ENAPK: HVO_2610 :N:A::::::::::::::::M::::A:::A:::W:::::::::::::::::::::::::L Hbo2238 :::TEF::::::::::::::F:::Q::::::D:::::::::::::::::::::::::::: rrnAC3429 --M::IPD::E::::::T::::::R:C::::LQ:::R:::::WA:PL:T:::::::-N:P Hmu2348 --M:TVPE::E::::::T:RW:::Q:::::::QH:LR::::::::ER:D:::::::-::P consensus LATVIGFPHGQHATAAKRAEAVDAWDAGADELDMVINVGRLKAGADDAVRADIAEVVAAV #oth 232.22....2232631351.341232....1.2.211.2.1212222.343.34.1111 HQ3205A :VS::::::::::SI:::K:::T::Q:::::I:V:L:I::::TS:TET:TH::::::::: NP3200A :VS:C:::::::::ET:AT::ETV:Q:::::I:V:::::::RG:DT:::::E:EQ::::: VNG1859 I:::::::::TQ::SV:V:A:EH:HAD::::::L::PI::::G:DHE::T:E::A:ND:T Hut2088 V:::::::::N:T::::V:::E::VE:::::::::C:::L::::E:::::E::ES::::T hla1121 I:::V::::::::PGV::D:::T:::D::::I:L::::::::::E::::A:E:SD::::: HVO_2610 ::::V:::::::T:T:::E::::::Q::::::::::::::::::D:EL:TE::S:::::: Hbo2238 V:::V:::::::S:::::E::::::EN::::::::::I:::::::::::ET::::::::: rrnAC3429 :TA::D:::::GQ:DSVCQA:KL::::::::::::C:::L::::E:::::DH:T::::S: Hmu2348 :S::VN:::::G::D:VA:::TE:::D::::I:V:C:::Q::::::A::EET:S:::::: consensus PVPVKVIIETPLLTDDEKHRACEAAADADAAFVKTATGFADGGATVADVELMSEYLPVKA #oth 13.....1.121.224.1221223111.1.223..1...43.1..241.24113.2.... HQ3205A :I::::::::T::N::::R:::KV:V::::D:I::S::::N::::T::::VL:S:::::: NP3200A :::::::V:A:::SAS:LRT:::L:::::::YL::::::-N:D::::A::T:A::::::: VNG1859 :L:::::::::V:::A:::A:::::::::::M:::::::T::::::P::S:::::::::: Hut2088 RK:::::::::::::E:::::SQLV:::G:D::::::::GG:::::P::::::::A:::: hla1121 ::::::::::A::S::::R::::::VE:::DM:::S:::::::::IR::::::::::::: HVO_2610 ::::::::::A:::EE::::::::::E::::::::S::::::::::E::A::A::::::: Hbo2238 :I::::::::A:::::::::::::::E:::D::::S::::::::::E:::R:A::::::: rrnAC3429 :::::::V:A:::S:A:LE:VGQLV::::::YL::::::SE:::::H:::IL:K:::::: Hmu2348 :I:::::V:A:::::G:::::G:IV:E:G:E:C::::::S:::::::::::L:Q:R:::: consensus SGGVGSYEDAKAMFDAGAERIGASSGVAIVEGAPEA---------------------- #oth ...111224.42.11...2.....1.24.24355446642221111111111111111 HQ3205A :::IS:::T::S:L::::::::::A::E:L:D::DIYYD::::::::::::::::::: NP3200A :::I::F:A:VE::::::D:::::A:A:::D:FDP:AFET:::::::::::::::::: VNG1859 :::::T:A::A:::::::V::::::::D::ASFA:-:::::::::::::::::::::: Hut2088 ::::::WA::::::::::D:::::::DV:A:EYF::QEA::::::::::::::::::: hla1121 ::::::::E:T::L::::V:::::::::::::H:GDGD:::::::::::::::::::: HVO_2610 :::::::DE:V:::E::::::::::::D::S::::E:::::::::::::::::::::: Hbo2238 ::::::::E:M::::::::::::::::E::S:I::::::::::::::::::::::::: rrnAC3429 ::::::WA::::::E:::::::::::DT::REWQAETAGETVTEPESDRDGADTTDGY Hmu2348 ::::::W:R::::::::::::::::::T:A:EWRA:EGGEDA::::::::::::::::