|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1440 | VNG0195 | HQ1413A | HVO_0583 | Hbo0940 | hla0015 | rrnAC2001 | Hut0065 | NP5328A | Hmu0487 |
536 | VNG0195 | 1141 | 414 | 448 | 469 | 422 | 471 | 475 | 464 | 487 |
687 | HQ1413A | 414 | 1400 | 526 | 574 | 530 | 595 | 605 | 579 | 610 |
869 | HVO_0583 | 448 | 526 | 1500 | 783 | 706 | 713 | 680 | 682 | 737 |
926 | Hbo0940 | 469 | 574 | 783 | 1477 | 701 | 743 | 750 | 800 | 704 |
930 | hla0015 | 422 | 530 | 706 | 701 | 1547 | 760 | 727 | 788 | 794 |
986 | rrnAC2001 | 471 | 595 | 713 | 743 | 760 | 1606 | 838 | 831 | 842 |
950 | Hut0065 | 475 | 605 | 680 | 750 | 727 | 838 | 1369 | 815 | 848 |
1067 | NP5328A | 464 | 579 | 682 | 800 | 788 | 831 | 815 | 1447 | 902 |
1052 | Hmu0487 | 487 | 610 | 737 | 704 | 794 | 842 | 848 | 902 | 1533 |
222 symbols consensus MSKITFRADDDLVEQLEAFDASKSEVMREALREYLDDAERDD----SDAPDAASDAGLD- #oth 11111111123125212532311111..2...41.3555646212334554555555651 VNG0195 --------------------------::N:::A::-------::::----------TTH: HQ1413A :::::::::::::G:::E:EG:::::::::::T::ENT:AMH::::--------EG:NG: HVO_0583 ::::::::::A:::R:DRL:T:::::::::::Q:::EL::::GADDTAGL:G:LS:RVE: Hbo0940 ::::::::::E:::R::GLET:::::::D:::V:::E:::SSEANET:E:EVTV:DV:Q: hla0015 ::::::::::::::::::C:::::::::::::TH::G:VG:::ADA:::T::TV::A:A: rrnAC2001 ::::::::::::ID:::::::::::::::::::::G::SPSA::::::P:SS::ESVT:A Hut0065 :::::::::::::T:::G::::::::::::::T::EGSDHES:::::E:ESSPEPTSAE: NP5328A :::::::::E::IR:::T::::::::::::::::::::GG:T::::GGR:PTDNGGSI:: Hmu0487 ::::::::::::ID:::E:::::::::::::::::EAPDESP::::-G:V::S:GD:G:: consensus DSIDDLIVERVDAILAERLG--GRL-------TPRAPQDVNVNISLDGASAETSANTTE- #oth 34411234122335344225114252111113556734121.115123533575454551 VNG0195 AAA::VP::S:NTPVRGAAT::---:::::::--D:QK::::T:RVSSP::VEEVR::P: HQ1413A SLNN::NSDTTHHTTGNKNH::---::::::TGES:GRK:T:::V::DE:GIVY::KQ:: HVO_0583 ELV:ERLD::LP:LVE:AAA::A:E::::::SERPT:S:L::::NV::SNG:SRV:AGV: Hbo0940 SRL:E::E:::::V::K:::AV:HS::::::::LAP:R::::::AVES:TD:::V:A::: hla0015 :R:::::AD:L::A:DD:::::::SAASPAAY::GNAG:I:::VT::AP::DKDDASVT: rrnAC2001 ET::E::E::::S:I:D::Q::T:H:::::::HHPQ::::::::::::V::GAANAE::Q Hut0065 E:L::::::::::V::::::::E:R:::::::Q:Q-::::::::::ED:APS:::T:--: NP5328A ::L::::A:::::::D:::::::H:GAS:::Y:::E::::::::::S:D:::M:HG:D:: Hmu0487 ::::::::D:::::IE:::N::::::::::::Q::S::::::::T:E:EN:SRE:VSDDQ consensus -----------------ESAAASTDRKTAAEDTDGASDTEEE-TCGQCGENLSPDHVYCP #oth 22223332511111111645554544535436435553655735.52..2414521.... VNG0195 :::ASGGRA::::::::DAEEPGD:GE:D::HA:TSATGD:S:V:S:::AE::A:::::: HQ1413A ::::::DAV::::::::AT::GKP:TAID::VNRKT:SS::ISE:NK::KA:IDG::::: HVO_0583 ::::::::D::::::::TESTP::V:::RD:LES:DA:DPDM::::::::SVG::::::: Hbo0940 ::::::::D::::::::G:KSD:KI:::ND::AS:VHTQ:K-:P:EK:::E::::D:::: hla0015 :::::::::::::::::RE:T:DA:AQ:RKTP::PDVQ:R:N:A::G::::VPT:::::: rrnAC2001 RRTADRGASAEDGRSHS::Q:SD:SGRKTEPE:RER:::::RK::A::::::GS:::::: Hut0065 :::::::::::::::::-------APPD:E:T::AVT:RNT:R::S::::SV:D:::::: NP5328A :::::::::::::::::-------S:::P::::A:::::DA::S:K::::D:::SD:::: Hmu0487 SAVSHDRRR::::::::::SH::::::::GRED:::PTAGRK:::::::::VTG:::::: consensus NCGEKASHRVFCECGDELRSDWAFCPSCGRRTPAADVLEQS- #oth ...1.231.1..1....212..2...3.....311.1.2451 VNG0195 :::G::T::::::::::I:A::::::R:::::VSG:A:DSA: HQ1413A ::::::A::::::::::IQ:::::::::::::S::::::K:S HVO_0583 :::::T::::::::::::::::::::D:::::::::::::A: Hbo0940 ::::::N::::::::::V::::::::G:::::S:::::::G: hla0015 :::::Q:::A::D::::::T::::::G:::::::::::KDR: rrnAC2001 :::::::R::::D:::::::::G:::G:::::::::::D:T: Hut0065 ::::::AR::::::::::::::S:::::::::A:::::D:-: NP5328A ::::::::::::::::::::::G:::::::::::::::KD:: Hmu0487 ::::::A:::::D:::::::::G::::::::::::::::N::