| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3536 | HQ2341A | VNG1272 | Hut1516 | hla2008 | Hmu1457 | NP3748A | rrnAC1168 | HVO_1348 | Hbo0201 |
| 2419 | HQ2341A | 3687 | 1956 | 2067 | 2122 | 2088 | 2127 | 2133 | 2206 | 2356 |
| 2445 | VNG1272 | 1956 | 3513 | 1921 | 2061 | 2165 | 2098 | 2084 | 2198 | 2220 |
| 2542 | Hut1516 | 2067 | 1921 | 3576 | 2038 | 2270 | 2192 | 2360 | 2231 | 2247 |
| 2632 | hla2008 | 2122 | 2061 | 2038 | 3565 | 2254 | 2334 | 2247 | 2452 | 2488 |
| 2679 | Hmu1457 | 2088 | 2165 | 2270 | 2254 | 3526 | 2320 | 2526 | 2316 | 2449 |
| 2704 | NP3748A | 2127 | 2098 | 2192 | 2334 | 2320 | 3523 | 2286 | 2386 | 2438 |
| 2776 | rrnAC1168 | 2133 | 2084 | 2360 | 2247 | 2526 | 2286 | 3583 | 2394 | 2553 |
| 2884 | HVO_1348 | 2206 | 2198 | 2231 | 2452 | 2316 | 2386 | 2394 | 3545 | 2748 |
| 3024 | Hbo0201 | 2356 | 2220 | 2247 | 2488 | 2449 | 2438 | 2553 | 2748 | 3770 |
532 symbols consensus --------------------------MITSRRMAAVDANAAALGVPRKQLMESSGNAVAR #oth 11111111111111111111122222222352112..3..1.1..212.....2.1.112 HQ2341A ::::::::::::::::::::::::::::::A::::::R::E::::SPQ:::::G:::::K VNG1272 ::::::::::::::::::::::::::------:::::R:::::::::A:::::::H::G: Hut1516 :::::::::::::::::::::MTFGSEL:G:EI:I::::::::::T:::::::A:::A:G hla2008 :::::::::::::::::::::::::::::TD::::::::::::::::::::::::::::: Hmu1457 :::::::::::::::::::::::::::::GSE::V::E:::::::::::::::::::::: NP3748A ::::::::::::::::::::::::::::S:EE::V:::::E::::::::::::::::::: rrnAC1168 :::::::::::::::::::::::::::L:GSE:GV::E:::::::::::::::::H:::: HVO_1348 :::::::::::::::::::::::::::::::::::::L::E::::::::::::::::::: Hbo0201 MYVKWVDPCDDREATPFTTPPDERPA::::D::::::E::E:F::::::::::::::::: consensus AVRDIADPGASVA------IVAGRGNNGGDAFVAARFLDAYDVTVSLLGRPETIRTDIAR #oth 322521.312323111111311..1.....11111...32.222.4...1113.414111 HQ2341A T::ELT:VDVESETPPVAV:::::::::::G::T:::::E:I:S:L::::::::::ST:K VNG1272 ::KRV:::::::::::::::::::::::::::A::::::D:A:S::::::::S:NDR:S: Hut1516 VI::V::ADDRIE::::::::::::::::::L::::::G:::CR:T:::D:DD:G::::: hla2008 E::A::::::::E::::::LLC::::::::::::::::S::::::R::::::S:::E::: Hmu1457 ::ER:::Q::::R:::::::::::::::::::::::::::::LS::::::::::T:E::: NP3748A V:ESV:::D::::::::::M:C::::::::::::::::SD::::::::::A::::::::: rrnAC1168 :::TL::::DQ:T::::::::::::::::::L:T:::::E::LR:L:::::DA:S:T::: HVO_1348 :C::L::::::::::::::V::::S::::::L::::::K::::::H::::::::S::::: Hbo0201 ::::::::::Q::::::::V::::::::::::::V::::D:::::H::::::::S::::: consensus ENWDALQAAEYDTRTVTDSSALAL-----DDPDVVVDAMLGTGITGALREPEATAAEAIN #oth 2..2..45243212415136334111111311.21...1..1.12.11...211.1533. HQ2341A Q::E::MKGG:::TV:Q:T:SIEIVGPNGES::I:::::::::V::::::::::::SQ:: VNG1272 A:::::::GG:::T::R:AH::::::::::::::::::L:::::S:PP:::::::I:R:: Hut1516 ::::::ERSTVE:::IG::T:FD::::::S::::I:::::::::S::::::V::::G::: hla2008 ::::::KS:AIP:E::A:AAD:::::::::::::I::::::S::::::::::R:::RLA: Hmu1457 Q::T::EQSD:E:EQ:R:A:QF::::::::::::I:::::::::S:P::::T::::AR:: NP3748A :::T:::Q:AI::TEI:APDD:S::::::::A:::::::::::::::::::::S:::::: rrnAC1168 :::::::H:::P:EP:K::::FD::::::GS::I::::::::::A:::::::::::T:M: HVO_1348 ::::::V:G:A:R::::::V:VD::::::G:::L:::::::::V::::::::::::R::: Hbo0201 ::::::E:S::::::::::K::G::::::G:::::::::::::V::::::::::::::V: consensus ESDATVVAVDVPSGLDADTGALAGVA------VDADRVVTFHDEKPGLAALDAPVTVADI #oth 332121111.....3112.1543341111111.3111.....141...632236.2.... HQ2341A HT::::LS::::::VN::::SST::::::::::EPNH::::::Q::::T:I::G:::::: VNG1272 AT::PT:::::::::::::::TP:S::::::::::::::::::TT::::DH:-H:::::: Hut1516 :A:::::SL::::::::S:A:::DG::::::::RP:::::::KP::::SE:GV::D:::: hla2008 ::::A:::::::::I:::::EST:SGDDDVVR:E::::::::::::::T::::D:::::: Hmu1457 D:ES:::S::::::M:G::::::AG::::::::E:::::::::T::::DE:::T:::::: NP3748A AT::::::::::::I:::::ERH::::::::::A::H:::::::::::E:IAV::::::: rrnAC1168 ::::::LS:::::::::E::R::EN:::::::::::H::::::T::::PD::V::::::: HVO_1348 ::S:::L:::::::V:::::DA::L::::::::::::::::::D::::GD::CE:V:::: Hbo0201 DL::::::::::::V:::::TA:::::::::::::::::::::::::::S:::A:::::: consensus GIPDAAELFVGPGDLLRLDRDPQSHKGDNGEVLVVGGGPYTGAPALSAQAALRAGADLVR #oth .1.42..42311...4434.2352...13.3..11.....1...1.3.11...2.1..11 HQ2341A :::Q:::QTA:::::YS:S:PT::::::F::::II::::::::::::::::::::::::: VNG1272 :::E:::TV:::::::GV::::HG::::A:S:::I:::::::::::C::::::::::::: Hut1516 :V:PG::Y::ER::::::S:PAD:::::F:::::I:::::::::::A::S:::S:::::: hla2008 :::A:::R:T::::::GIA:::N::::E::::::I:::::::::S:::RS:::T:::::: Hmu1457 ::::T:::::ER:::R::::::T:::::::::::::::::::::::A::::::::G:::: NP3748A :::::::R::ER::::::S:::TA::::F:R:::::::::A:::::::::::::::::AF rrnAC1168 ::::T::::IER:::T::E:::A:::::::::::::::::::::::T::::::S:::::: HVO_1348 :::E:::::T::::::A::::A::::::H:D:::::::::::::::A::S::::::::A: Hbo0201 :::A:::::::::::HH-T:RS::::::H::::::::::::::::::::::::::::::: consensus VACPEAVAREVQGYSENLIVRPFDGDRLAPEHVDDLLALAADHDVVVLGPGLGDADATLD #oth 2.1.541.321.111131.12333.43141511252432.325.4213.....2415223 HQ2341A I:::V:I:D:I:S:::S::::AYP:E::T:TALEHVQS::V::::T::::::::DEK::S VNG1272 L:V:D:::A::::FD:TF::DSVV:T::VE:::P::::R:E:A:A::I::::::::T:QA Hut1516 ::V:A:I:D:::::::D::::::::TQ:TEPA::P::D::::::S::::::::AGE:::S hla2008 :::::T:::T:::::AD::::GLP:N:IG:A:::RA:E:::GN:::::::::::S:GVSE Hmu1457 ::::R:::DA::::::::::::L::AT:::S:::E:I:::DAS:A::::::::::EP::: NP3748A ::::::::G:::::::::::E:LP::::::P::P:::ER::AV:C::F::::::DE:::S rrnAC1168 ::::AV::::I:S::::::M::::::H:::H:::R:AE::::::TLIV:::::N:::::: HVO_1348 :::::G:::::::::::::::G:S:::::::::P:::DF:::R::::F::::::::ES:: Hbo0201 ::::KS::::I:::::::::::::::H:Q:S:::G:T::::::::::F::::::E::::: consensus AVAAFLAGFEGTAVVDADALQVVPDVETDATLICTPHQGELLKMGGETADDWRERADLVE #oth 2123113423.11.......31.1211131312....1..143..131222244134413 HQ2341A V::S::R:HT::V:::::::S:::T:DPAGKI:::::::::EA:::::::::EH::KKMS VNG1272 :::::::A:::R::::::::TA::::::::::V::::R:::QA:::P:V:GSQPSR:A:: Hut1516 ::E::::D::::::::::::R:::::::E::::::::R::FER:::QD:A::ET::EN:A hla2008 F:RE::SRYD:R::::::::R:::EID:::E::::::::::VG::::::::PD:::A::R Hmu1457 :A:D::ERYD:R::::::::S::SE:::T:D::::::::::::::::::EA::D:::R:A NP3748A ::E::FE:::::::::::::::::::::::E:L::::::::R:::S:::A:PA:::S::S rrnAC1168 :::DL:S::A::::::::::S::::I::::D:V:::::::::G::::::E:::::::::: HVO_1348 ::RE:::AYD::::::::::::::E:::E::::::::::::R::::::DA::ET:S:::R Hbo0201 :::D::ESY:::::::::::::::E:D:::::V:::::::::::::K::::::::T:::: consensus SFAAEL--GHTLLVKGAYDIISDGDRTRVNRTGNPGMTVGGTGDVLAGVTGALAAVLDPH #oth 411222111311.11.15.1211.351.3211.1.......1..1...222.11214445 HQ2341A A:IS::SDS::::::::I::::N:ET::I:::::::::::::::I::::V::::C::S:I VNG1272 G::::::::Q::::T::R:VL::::T:::::S:T::::::::::::::TAA:ML:TQP:I Hut1516 EL:::::::M::::::PA::::::KS:::S:::::::::::::::::::::::::T:::: hla2008 :::D:I:::::::::::V:VV::::GV:L:H:::::::::::::::::AV::::::T:SF Hmu1457 D:::QI:::Q:M::::::::V:::T::::::::::::::::S:::::::VS::::TCGE: NP3748A A:::D::::V:::L:::E:::T::::::R:::::::::::::::::::AA::::C:::TQ rrnAC1168 :::::V:::Q::::::P:::V:N:E::::G::::::::::::::::::::::::S:Q::L HVO_1348 E:::D::::::::::::::VV::::AV:::::::::::::::::::::A::::::::P:L Hbo0201 ::::::::::V:::::::::::::EV::::::::::::::::::::::T:::::C:RNAR consensus DAAAVGAYANGRAGDLAVEERGYGLVATDLLDRLPTALWDDD---------- #oth 3..2311.22.31.1321134.3..1.1.14232.62224454321111111 HQ2341A Q::T:::::::::::IT::K::N::L:::::ETI::::Q:PKDVTAGVSSDD VNG1272 Q::SAA:::T:G::ER:A:A::H::L:::IC:A::A:I:GGQDA:::::::: Hut1516 P::SL:::VT::::::V::::::::::S:::::V:::M::EQP::::::::: hla2008 H:::::V::::L:::A:ADDM:::::::::P::::E:MR:E-:::::::::: Hmu1457 ::::I:::VT::::::VAD:::N:::::::VAAI:R:::QGTE::::::::: NP3748A :::::A:::::::::IV:::Q:::::::::TAA::K:::P:::::::::::: rrnAC1168 ::::IA::TV:SV::RV:DD::::::::::::EI:SV::QR:AEP::::::: HVO_1348 :::::A:::::::::::AD:F:G::::::::E:::VG:RG::E::::::::: Hbo0201 H::::::::::::::A::::N::::L::::V::::V::RR:E::::::::::