|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2042 | NP3510A | HQ2647A | rrnAC0448 | Hmu1121 | Hut2085 | VNG0893 | hla2391 | HVO_1579 | Hbo3464 |
1396 | NP3510A | 2002 | 1178 | 1324 | 1352 | 1236 | 1319 | 1309 | 1360 | 1338 |
1432 | HQ2647A | 1178 | 2043 | 1328 | 1299 | 1358 | 1350 | 1335 | 1417 | 1393 |
1597 | rrnAC0448 | 1324 | 1328 | 2052 | 1744 | 1448 | 1417 | 1526 | 1558 | 1493 |
1608 | Hmu1121 | 1352 | 1299 | 1744 | 2031 | 1445 | 1429 | 1483 | 1552 | 1514 |
1652 | Hut2085 | 1236 | 1358 | 1448 | 1445 | 2208 | 1507 | 1553 | 1607 | 1567 |
1706 | VNG0893 | 1319 | 1350 | 1417 | 1429 | 1507 | 2059 | 1594 | 1703 | 1662 |
1798 | hla2391 | 1309 | 1335 | 1526 | 1483 | 1553 | 1594 | 2046 | 1765 | 1749 |
1956 | HVO_1579 | 1360 | 1417 | 1558 | 1552 | 1607 | 1703 | 1765 | 2024 | 1884 |
1886 | Hbo3464 | 1338 | 1393 | 1493 | 1514 | 1567 | 1662 | 1749 | 1884 | 2017 |
296 symbols consensus ---------------------MMDDSEDPNDDVQYHLEVAPDDVADAVLLPGNPERVDKI #oth 111111111111111111212245411112222...212343.2134.....1.2.1221 NP3510A :::::::::::::::::::::--------MS:D:::I:LSDG::DGP:::::D:D:I:I: HQ2647A :::::::::::::::::::::-:KN::::S::E:::::ITA::I:ET:::::::G::ET: rrnAC0448 ::::::::::::::::::::::TS:::::::::::::::GE:::::S::::::::::E:V Hmu1121 ::::::::::::::::::::::T::::::::GE::::::::G:::PS::::::::::A:V Hut2085 VFVPVEWTGRELNRFRENTTY:PG::::::E:E::::A:T:E::::I:::::::::IE:: VNG0893 ::::::::::::::::::::::PGT::::::E::::::::AE:I::::::::::::::T: hla2391 ::::::::::::::::::MTDKS:R::::::E::::V::GE::::::::::::::::::: HVO_1579 :::::::::::::::::::::-:N:::::::E:::::::G:A:L:::::::::::::::V Hbo3464 :::::::::::::::::::::-:::::::::E::::I:L:SE:::::::::::::::::V consensus TALWDDHEEKADHREYRTATGTYDGTPISVTSTGIGSPSAAIAVEELARVGADTFIRVGS #oth 245..4223414...1..12.41222.111......1.1....2.....2222111.... NP3510A ADC::NA:PL:::::::::A:E:::E:LAA::::::::::::::::::::::E::::::: HQ2647A :EM::QSTVRG::::F:::::::QE:::::::::::G::::::::::::I::E::::::: rrnAC0448 VDY::::DIV:E:::::::::NH:::::::::::::G::::::L:::::::::S:::::: Hmu1121 VES:::::VV:::::::::::E::::::::::::::::::::::::::::D:E:LL:::: Hut2085 :RF::ES::::H::::::VS::::::::::::::::G:G::::::::::A:S:::::::: VNG0893 :P:::::::M:H:::::::::A:::::::::::::::::::::::::::A:::::::::: hla2391 :::::G:::V:H:::::::::::EDA:::::::::::::::::::::::::V:::::::: HVO_1579 :::::::::::S:::::::::S:::::::::::::::::::::::::::::::::::::: Hbo3464 ::::::A::::Y:::::::::::E:::::::::::::::::::I::::::E:Q:L::::: consensus CGAIQPEMDVGDLVITTGAVRQEGTSKEYVREDYPAVADHEVVSALVAAAERLGYDYHLG #oth ..21223232...1.121.1.1...13..1.2....3.1311.2..21...2.111..2. NP3510A ::T::::VE::::::::A:::K::::D::I:A::::S:HD:::T:::T::::::HE:::: HQ2647A :::LSADVA::::I:SS::I::::::S::::D:::::::Y::::::T::::Q::::::V: rrnAC0448 :::::E:ASI::::::::::::::::::::::::::S:::RI:::::::::E:::::::: Hmu1121 :::::EQASI:::I::::::::::::E:::::::::T:::R::::::::::E:::::::: Hut2085 ::S:REGVS:::::::::::::::::::::::::::T:::::::::T::::::D:E:::: VNG0893 :::L:AD:EP::::::R::::::::TD::::::::::::::::A::I:::::::H:::V: hla2391 ::::::G:::::::::::::::::::D:::::::::A::G::::::::::::::::::T: HVO_1579 ::::::::::::::::S:::::::::::::::::::::::::::::::::::::::::V: Hbo3464 ::::::::::::::::S:::::::::::::::::::::::::::::::::::::::::V: consensus LTMSADSFYAGQGRPGFEGFRAAGSDELVEELREANVKNIEMEASAILTIANVYGLRAGA #oth 3.2.1....2..3.2.1321212.1233232.2121.3.1....1121.1.21.1..... NP3510A V:C:T:::::::A:D:VG::::::AEAEL:A::::G:L:F:::::TV::L:GL::::::: HQ2647A M:L:T::::P::D:M::NEYTPP::GS:ISD:N:M::M::::::ATL::::SL:Q::::: rrnAC0448 V:C:T:::::::S:::::D:E:S::::RIAA:Q::G:L:F::::AT:::L::L::::::: Hmu1121 ::C:T:::::::S:::::::E:S::::RIDA::::G:L:F:::::::::L::L::::::: Hut2085 T::::::::S::::::::::E:P:::T:::D:Q:V::T:::::::::::::::::::::: VNG0893 ::::::::::::::D:::::::P:A:AMLD:::D::::::::::A::C:L:::::::::: hla2391 V:::::::::::::::::::E::::::::A::QD:::::::::::::::::::::::::: HVO_1579 ::::::::::::::::::::::::::S:::::::::::::::::A:L::::::::::::: Hbo3464 :::::::::::::::::D::::::::S:::::QD::::::::::::L::::::::::::: consensus VCSVYANRVTGEFRTEGESRAAETASLAVHLLAKMDEVKREAGVDRWHAGLSLD-- #oth 1.2.1.1.2....21222321112...1451.12..34142211.3..1.111232 NP3510A ::T:::D:T::::::D:QQK::::::::AA::S:::RL:NA:::::::::::::DH HQ2647A ::T:::::E::::QSGDDTK:::::::GS:::::::A::HSV:A::::::::IESE rrnAC0448 ::T:::::::::::::::RK::KC:::::SY::E::AAVE::DA:G::::::I:R: Hmu1121 ::T:::::::::::::::R:::K:::::IDY::R::AAVEASDA:H:::::::-:: Hut2085 ::A:::::::::::::SDQ::S:V::::TK:::R:::::A:::::H::P::E:-:: VNG0893 ::::F:::E::::L:::::T:S::::::::::::::QR:AA::::Q::::M::::: hla2391 I:::::::::::::::::::T::::::::T:::R:::::::::A:::::::::-:: HVO_1579 :::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3464 :::::::::::::::::::::::::::::::::::::K::::::::::::::::::