|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1415 | VNG0228 | HQ1289A | hla2725 | Hmu0615 | Hut0081 | rrnAC1694 | NP0620A | HVO_0647 | Hbo0880 |
1138 | VNG0228 | 1425 | 1005 | 982 | 1049 | 1069 | 1076 | 1048 | 1058 | 1052 |
1166 | HQ1289A | 1005 | 1419 | 1071 | 1140 | 1099 | 1120 | 1095 | 1112 | 1102 |
1183 | hla2725 | 982 | 1071 | 1408 | 1089 | 1112 | 1105 | 1107 | 1146 | 1114 |
1254 | Hmu0615 | 1049 | 1140 | 1089 | 1426 | 1151 | 1169 | 1181 | 1117 | 1150 |
1260 | Hut0081 | 1069 | 1099 | 1112 | 1151 | 1401 | 1203 | 1169 | 1166 | 1157 |
1265 | rrnAC1694 | 1076 | 1120 | 1105 | 1169 | 1203 | 1477 | 1136 | 1139 | 1169 |
1246 | NP0620A | 1048 | 1095 | 1107 | 1181 | 1169 | 1136 | 1429 | 1178 | 1218 |
1258 | HVO_0647 | 1058 | 1112 | 1146 | 1117 | 1166 | 1139 | 1178 | 1427 | 1249 |
1244 | Hbo0880 | 1052 | 1102 | 1114 | 1150 | 1157 | 1169 | 1218 | 1249 | 1426 |
192 symbols consensus MTRIVVIDNHGQFTHLEQRALRDL-GVDVELVDNDTPPAEI--DADGIVLSGGPDMDRIG #oth ..2.3.1.1........2.1...31.111213111.2.221112...1......21111. VNG0228 ::H:L:V::::::::::H:L:::MD::T:D:T::T::::D:::::::L::::::T:AD:: HQ1289A ::H:A:::::::::::::::::::::::::::::T:S:EQLIQT:::L:::::::I::V: hla2725 ::::::::L::::::::R:::::V::::T:I:SA::::::::::::::::::::::::V: Hmu0615 ::E:A::::::::::::::::::I::::::::::::::G::::E:::L:::::::::::: Hut0081 ::::D::::::::::::::::::::::::S::::T::::::::::::L::::::S::::: rrnAC1694 ::::D::::::::::::::::::M:::::S:R::T:::E::::::::::::::::::D:: NP0620A ::::::V::::::::::H::::::::::T::I::::::E::::::::::::::::::::: HVO_0647 :::::::::::::::::R::::::::::T:::::::D::D:::::::::::::::::::: Hbo0880 :::::::::::::::::H::::::::I:T:::::::::E::::::::::::::::::::: consensus NCPAYLDLDVPVLGICLGMQLIADELGGRVGAGDYGGYADVTVEILDDDDPLIGSLAPET #oth 2212..21.1.1..1...1.12.5111.2123.1.......11414.24...2...1.2. VNG0228 H:RE::T::::I::V:::H::::::::::IE::::::::::::S:S:A::::V:::::D: HQ1289A :::E::E::I:I:::::::::L:N::::S:A::::::::::DI:::::T::::::::::: hla2725 :A:D:::::::::::::::::::V:R::A::G:::::::::D:::V::E:::V:::::K: Hmu0615 :::::::M:::I:::::::::M::Q::::::::E:::::::::Q:D::E::::::::::: Hut0081 :S::::::::::::::::::IM:A::D:A::E:::::::::::D::::A::::::::::: rrnAC1694 :::E:::::::::::::::::::::::::::G:E:::::::::D::::::::L:::Y::: NP0620A HS:::::::I:::::::::::M:A:::::::::::::::::::S:E:ES::::::::::: HVO_0647 R::D::::::::::::::::IL:E::D::::S:::::::::D:::::E:::::::::::: Hbo0880 :::D::E:::::::::::::I::S:::::::S:E:::::::::GV::ES::::::::::: consensus RVWASHADEVKEVPDGFERTATSDVCGVEAMSDTDRDLYGVQWHPEVAHTEEGEEVFENF #oth ..........231.4..22.14.11.51...11424421...........13..1..1.. VNG0228 ::::::::::VA:::::TI::E::I::::::G::::::::::::::::::::::A::::: HQ1289A :::::::::::S::E::::::R::::RI::::NR:QER:::::::::::::R:::::K:: hla2725 ::::::::::V:::E::V::::::::D:::::N:EAG::::::::::::::R:::::::: Hmu0615 :::::::::::::::::::::Q::::N:::::N-GT:RF:::::::::::::::A::::: Hut0081 ::::::::::TQ::T:::::::::::::::::::::::::::::::::::::::A::::: rrnAC1694 ::::::::::::::P:::::::::::::::::N::EAI:::::::::::::::::::::: NP0620A ::::::::::::L::::::::::E::NI::::::::NR:::::::::::::A:::::::: HVO_0647 ::::::::::::::E::TH:::::::TI:::::A::::::::::::::::A::::::::: Hbo0880 ::::::::::::::A::TH:GS::::SI:::::P:::::::::::::::::N:::::::: consensus LAICE------- #oth 322.45411111 VNG0228 V::::::::::: HQ1289A I:R:Q::::::: hla2725 V::::SA::::: Hmu0615 ::V:NGE::::: Hut0081 :S:::::::::: rrnAC1694 :SV:DQQSVARQ NP0620A RD::AGD::::: HVO_0647 ID:::R:::::: Hbo0880 :D::NA::::::