|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3508 | VNG1938 | Hut2009 | NP2394A | rrnAC3278 | Hmu2454 | HQ3127A | hla1234 | HVO_2198 | Hbo1907 |
2657 | VNG1938 | 3846 | 2280 | 2391 | 2358 | 2370 | 2402 | 2288 | 2451 | 2406 |
2743 | Hut2009 | 2280 | 3472 | 2564 | 2555 | 2652 | 2303 | 2349 | 2345 | 2304 |
2841 | NP2394A | 2391 | 2564 | 3395 | 2730 | 2648 | 2321 | 2444 | 2461 | 2360 |
2861 | rrnAC3278 | 2358 | 2555 | 2730 | 3478 | 2791 | 2339 | 2481 | 2453 | 2415 |
2952 | Hmu2454 | 2370 | 2652 | 2648 | 2791 | 3467 | 2310 | 2517 | 2523 | 2479 |
2632 | HQ3127A | 2402 | 2303 | 2321 | 2339 | 2310 | 3540 | 2444 | 2445 | 2549 |
2844 | hla1234 | 2288 | 2349 | 2444 | 2481 | 2517 | 2444 | 3713 | 2656 | 2634 |
2862 | HVO_2198 | 2451 | 2345 | 2461 | 2453 | 2523 | 2445 | 2656 | 3493 | 2785 |
2803 | Hbo1907 | 2406 | 2304 | 2360 | 2415 | 2479 | 2549 | 2634 | 2785 | 3552 |
517 symbols consensus -------------MDAFDSAASVPAD--------------------------DFDFEHRP #oth 1111111222334453457553644511111111111111111111111111334.353. VNG1938 MPGTPPHQSFTCVRTRHS::R:L:TNLRTDPAAAVAGFLPVQPVPSTMTDASAL::DVV: Hut2009 ::::::::::::::A::EPETN::R:::::::::::::::::::::::::::E::::I:: NP2394A :::::::::::::::::EAS:N:::-::::::::::::::::::::::::::ELQ::R:: rrnAC3278 ::::::::::::::PDVPETVGT:DG::::::::::::::::::::::::::STE::::: Hmu2454 ::::::::::::MP::::T::N::RG::::::::::::::::::::::::::E:::S::: HQ3127A ::::::::::MDADE:VSDEI:ESTL:::::::::::::::::::::::::::LE:STS: hla1234 :::::::MNPARDP::T:RD:ADLD:::::::::::::::::::::::::::::G:AE-: HVO_2198 :::::::::::::-------M:GA:H::::::::::::::::::::::::::::G:::V: Hbo1907 :::::::::::::----M:DR:ATGL:::::::::::::::::::::::::::RS:::V: consensus TTDQSFENALAKARAGDRLTVDDAIELLTTGTDRDGIDPRRKELVLEAADRRRAEVVGDE #oth 51..1.11..23..3.5..212.12..31.11.43.1145...4...2.....113..22 VNG1938 S::::::::::N::D:R::::A:G:::I:::::T::::::::::::::::::::D::::D Hut2009 :S::::AD::RR::D:S::::A:::::::::S:AP:::RE:::A::::::::::::::E: NP2394A V:::::::::E:::S:V::D::::::::::SS:TE:::QS::::::::::::::::::E: rrnAC3278 ::::::::::::::N:T:::::::V::F::::::::::HD:::Q:::::::::::::::: Hmu2454 E:::A:::::::::N:T::S:E::::::::::::S:::::::::::::::::::::::E: HQ3127A :::::::::::A:::::::SI::G:::I:::::SP:::TA:::K:::I:::::::R:::V hla1234 A:::::::::::::D::::SI:::T:::A::::TE:V::V:::R:::L:::::H:E:::: HVO_2198 E:::::::::::::::E::::::GV::I::::::E::G:E:::::::::::::::M::ND Hbo1907 D::::::::::::::::::::A:GV::M:::::C:::::V:::Q:::::::::::M:::D consensus VTFVANLNNNVTTACNTGCLFCNFKDSAHQFEADYDADHGGFTKTPAESRAIVADALDRG #oth 1.1............11..1.....13123.133334214......12.232.22.222. VNG1938 ::::::::::::::::::::::::::T::R::TEHE:A:::::::::::K:T::::IQ:: Hut2009 ::V::::::::::::D::::::::::::E::R::RPD::P::::::::::E:::E:VE:: NP2394A ::::::::::::::::V:::::::::A:QR::::::G:NA::::::::::EV::::V::: rrnAC3278 ::::::::::::::::::::::::::RSE::RS::QE:::::::::S:::Q::Q:::::: Hmu2454 :::::::::::::::::::Q::::::RSE::RTS:QD::::::::::Q::E::::::EM: HQ3127A ::::::::::::::::::::::::::::::::LNS:VN:::::::::V:Q:T::A:V::: hla1234 I::::::::::::::::::::::::::::A::::S::::V:::::::::::::E::::M: HVO_2198 :::::::::::::::::::::::::NT::L::::S:::::::::::::::D:::::VEM: Hbo1907 :::::::::::::::::::::::::NT:::::SE:EG::T:::::::::::V:E::::T: consensus IYEVTSVSGLHPAFALDEEHREILEAYD-NDRGDVNYKPPEAYDTDPGTYVEQIRAMSVG #oth 11..1........12.112.112.442214144431.21133.31..21.22.24..122 VNG1938 VS::::::::::::G:N:A::DA:D---:P:DP:H::::::::::::T::AA::A:::EA Hut2009 ::::::::::::::::::::::L:::V:PA:::T:::R::D::T::::::::::E::::: NP2394A :::::::::::::L::::::::::S:--:A:D:H-::Q::ST:E:::::::D:L:::N:D rrnAC3278 ::::C::::::::L:::T:::::::T--:S::::L::RS:DE:E:::A::C::LD::N:: Hmu2454 ::::::::::::::::::::::::A:--:S::::L::R:AGE::::::::C:::E::::: HQ3127A :S::::::::::::::NT::::::AE::::PARA:::::::Q:T:::::::::L:::::: hla1234 V:::C::::::::L::N:::H:::QS:::DPESE:::::::E:A::::::::::E::::: HVO_2198 :::::::::::::LV:::::::::::::::PAAE:::::::::::::AS:A::LS:::AA Hbo1907 ::::::::::::::V:N:D::::::S:E::PYAE:D::::::::K::::::::M:::::: consensus GVHLHSMTPEEAYHARRGTDWDYEEVYRRLADAGLDSVPGTAAEILVDEVRDVICPGKIR #oth 12.2..1.....2..3..11.2.221142.42...111.........1...11...1.14 VNG1938 :A:V::I:::::H::Q::VS:G:D:::ET:::::::T:::::::::::::::::::::MT Hut2009 D::V::::::::A::::::::::R::::::::::::::::::::::::::::::::A::D NP2394A D::I::::::::::::::::::::T:F:::S:::::::::::::::::::::A::::::G rrnAC3278 DI:::::::::::::::::::S::::FS::Q::::::::::::::::::::::::::::: Hmu2454 :::::::::::::::::::::::::::G:::::::::::::::::::::::::::::::D HQ3127A D:::::I:::::H::::::::S::QI:TE:RK:::::A::::::::::::::::::::MS hla1234 :I:::::::::::::A::::::::T:::E::A:::::A:::::::::::::::::::::: HVO_2198 :A:V::::::::H::K:::::S:::::::::::::A:A:::::::::P:::E:::::::G Hbo1907 :::::::::::::::::::::S::::::E:K::::::A:::::::::P:::E:::::::S consensus TDEWVAAMEAAAAAGLDVTATIMYGHVENEAHRALHLDRIRDLQDRTGAITEFVPLSFVH #oth 131.311121.341..12.1.2.....1123.125..411.2...1123.1.......11 VNG1938 ::::::::::::D:::GT:::::::::::A:::IH:::V::A:::::HN:::::::::I: Hut2009 :G::L:::::::DV:::::S:::::::::::::::::K:V:::::::::::::::::::: NP2394A S:::LE::T:::EV:::T::::::::::::::::I::::::::::Q::::::::::::I: rrnAC3278 ::::LE::A:::SV:::M:S:M::::::::Y::::::Q:::::::::::::::::::::: Hmu2454 SG::M::::::TSV:::::::V:::::D:::::::::E:::::::::::::::::::::: HQ3127A SS::E::I:G:IK::::::::::::::::A::QIT::K:V:E::::::G::::::::::: hla1234 ::D::::::G:M:::::::S:M::::::TVE:::K::GV:::::::::R:::::::::I: HVO_2198 ::::::G::G:ME:::::::::::::::T:K::V::::V:::::::Y:G:S:::::::I: Hbo1907 :A:::EG::G:I:::::::::::::::::A:::VM::KV::::::::DG::::::::::Y consensus QNTPLYERGLVDGGASDDEDELMIAVSRLFLDNIDHIQSSWVKFGDAKGLKLLNCGADDF #oth 22...233.2.22.1243....21..1..1...1111.2....2.1232.11.2...1.1 VNG1938 EQ:::::::V:::::::A::::::::::::::::::::::::::::::::A::::::::: Hut2009 P::::A:N:M::S::TRS::::::::::::::::E::::::::Y::EF:::::S:::::: NP2394A :E:::K::::::::::AH:::::V:::::Y:::::::::::::Y::TQ:::M:::::::: rrnAC3278 EE:::::::M:::::TV::::::::::::::::V::::A::::Y::TQ:::M:T:::::: Hmu2454 EE:::::E:::S:::T::::::L::::::::::VE:::T::::Y:::::::M:T:::::: HQ3127A ::::::K::V:S:::::A:::::::::::::::::N:::::::::NE:A::::::::N:: hla1234 ::::::RH:V::S:P:H:::::VV::A::::::V::V:A::::S:::H:::::::::::: HVO_2198 ::::::D::::T:::::::::::V::A::Y:::V:::::::::::N::A::::::::::L Hbo1907 :::::::::::TE::A:A:::::::::::::::::N:::::::::N::S::::::::N:: consensus MGTILSEEITKRAGGDYGEFRSFADYVDMITAIGRTPVERSTDYRQRRRIDPDADPHGPR #oth ..........2....42.12.1231.211.211..31.......22.2323112646..5 VNG1938 :::::::::::::::QH:::::V:::AE::S:::::::::::::TT:HV:N::::TI::H Hut2009 ::::::::::A:::::F:QY::::::DEL:RSV::R:::::::::::EP:RGEPP--::: NP2394A ::::::::::::::::::::::IQE:A::::S:::V::::::::ET::VV::::SSV::: rrnAC3278 :::::::::::::::::::::::QE:A:::::::::::::::::E:::V::::::VL::Q Hmu2454 :::::::::::::::::::M:T:RE:::::::V::V:::::::::::::::::DP:F::E HQ3127A ::::::::::T::::TH:::::V::::EL:S:::::::::::::TR:HELN:::EVS::M hla1234 :::::::::::::::E:::::::D:::::::::::::::::::::T:::::::DN::::: HVO_2198 :::::::::::::::GF::::::D:::::::::::R:::::::::T::P::::DG::::T Hbo1907 :::::::::::::::G:::Y:::D:::E::S::::PA:::::::::::::A::DA::::M consensus LGPRADGTPLLD----------------------ADD #oth 1..3.....1154453222111111111134245121 VNG1938 V::N::::::VSERAG:::::::::::::TPPHS:G: Hut2009 :::Q::::::::DSA:::::::::::::::::::--- NP2394A :::::::::::-::::::::::::::::::::::--- rrnAC3278 ::::::::::::::::::::::::::::::::::--- Hmu2454 :::K:::::M:E::::::::::::::::::::::--- HQ3127A :::Q:::::::GPDDNGLT::::::::::PSSIV::: hla1234 :::::::::M:SDSSSGGSGKSGASGASDGESSG::: HVO_2198 ::::::::::::GRR:::::::::::::::DPAT::: Hbo1907 :::::::::M:AGCESDG:::::::::::GEPAP:::