| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4497 | VNG2352 | HQ3709A | hla0245 | HVO_0054 | Hbo1439 | NP0328A | rrnAC2701 | Hut2190 | Hmu3063 |
| 3419 | VNG2352 | 4446 | 2763 | 2919 | 2936 | 2921 | 3029 | 3022 | 3076 | 3159 |
| 3419 | HQ3709A | 2763 | 4598 | 3144 | 3304 | 3386 | 2752 | 3012 | 2849 | 3064 |
| 3532 | hla0245 | 2919 | 3144 | 4559 | 3377 | 3333 | 2924 | 3097 | 2954 | 3129 |
| 3688 | HVO_0054 | 2936 | 3304 | 3377 | 4533 | 3731 | 2977 | 3176 | 3085 | 3173 |
| 3750 | Hbo1439 | 2921 | 3386 | 3333 | 3731 | 4575 | 2959 | 3282 | 3055 | 3196 |
| 3354 | NP0328A | 3029 | 2752 | 2924 | 2977 | 2959 | 4439 | 3231 | 3007 | 3052 |
| 3654 | rrnAC2701 | 3022 | 3012 | 3097 | 3176 | 3282 | 3231 | 4754 | 3182 | 3420 |
| 3544 | Hut2190 | 3076 | 2849 | 2954 | 3085 | 3055 | 3007 | 3182 | 4522 | 3566 |
| 3794 | Hmu3063 | 3159 | 3064 | 3129 | 3173 | 3196 | 3052 | 3420 | 3566 | 4542 |
641 symbols consensus ------MSEGERLTELAKRRGFFFGSSEAYGGVAGFYTYGPQGAALKSNIEDAWRDRFAV #oth 11234355432424...1...1113123....22..1.1..2...1.3.2.22..21123 VNG2352 ::::::--MS:TVS:::R::::::QA::::::A::::::::E:::::R::::::::::VT HQ3709A MSTKEDQT:::::A::::::::::::NG::::::::::F::::::::::::A:::E::T: hla0245 ::::::-MAS:EIG::::::::::::NG::::T:::::F::::::::K:V::::::::TI HVO_0054 :::MSEGD:SAA:::::::::::::::::::::G:::::::::::::::V:E:::E:::: Hbo1439 ::MTADRT:::::::::::::YY:::::::::T::::::::::::::::V:::::E::T: NP0328A :::::::::L:T::::::::::::S:N:::::T::::::::E:::::R:L::I:::I:VR rrnAC2701 ::::::::::::::::::::::Y:P::S::::A:::W::::::::::::::::::::YV: Hut2190 ::::MTSVSA:A:V:::::::::LQ:AD:::::S::::F::::::M:R:V:ET::::::I Hmu3063 ::::::::D:GD:V:::::::::LQ:AG:::::S::::F::S:::::Q::::T::N:::I consensus QEGNMEIDAPTVMPEPVFEASGHLDGFDDMLVECPECGESHRADHLVED-NTDIEDAESL #oth 31.14.221.112..1..1.....12....11..21.132.....21.124222.1..24 VNG2352 R:::::::S:::T:::::Q::::::D:::::::::D:::::::::VI::::::V:::::M HQ3709A R:::Y::E:::I:::::::::::::::::::::::D::TA::::::I:::A::V:::::A hla0245 R:::R::E:::I:::A::::::::E:::::::::::::::::::::::A:V:E:::::A: HVO_0054 ::::L::E:::I::::::::::::::::::::::A:::::::::::I::::SEL::::T: Hbo1439 ::::L::::::I:::::::::::::T:::::::::::A::::::::I::::S:L::::T: NP0328A EL::::LE:::::::A::::::::::::::II::::::AT:::::::::EIE::::::AY rrnAC2701 K::HQ::S::D:::::::::::::::::::I:::G:::AT:::::::::::::::E:::: Hut2190 :::H::::::::L:::::::::::::::::::::::::Q::::::I:::GE:G::E:::: Hmu3063 ::::::V::::::::::::::::::::::::::::::::::::::I:::::::::E:::I consensus PPEEVEELIAEHELVCPSCGTGLAGQSVEDFNLMFETNIGPGSSDPGYLRPETAQGIFVE #oth 364222231133412..4.235.1123125.....3.2....1241..........1.2. VNG2352 :TD:::A:::D::::::A::GP::::::TG:::::D:T::::DG::::::::::::M:T: HQ3709A :I::::D::I::N::::Q:QAT:G:EP:DS:::::::::::::ASS:::::::::::::: hla0245 :GS:::::::DNDIA::::::P:::VT::::::::A:D::::DGQ::::::::::::::: HVO_0054 S::AAA:K::DLG::::T::AD::::::::::::::::::::::T::::::::::::::: Hbo1439 SL::AA:E::ALD::::N::AE::::::DN:::::::::::::::::::::::::::::: NP0328A E:T::A::::T:HIE:::::ES:::E:::E:::::G::::::::A::::::::::::::: rrnAC2701 :N:::MD:::::GIE::::H:S::D:P:DN::::::::::::::S::::::::::::::: Hut2190 A::RI::VV::Y::A::T::::::::AI:Q::::::::::::::S:::::::::::::I: Hmu3063 :VA::::::::Y:::::T::::::::AI:::::::::::::::A::::::::::::::I: consensus FPRLKEYARNQLPFGVTQIGRAYRNEISPRKSLVRTREFTQAELEQFIDPERDEPALDAV #oth ..1221...15....11.1.31........3311.2....1....3.1..12.112132. VNG2352 ::::::::::::::::A:V:TG::::::::NA:L::::::M::::F:V::AG:G::::R: HQ3709A ::QI:Q::::T::::::::::::::::::::RI:::::::::::::::::::::::::E: hla0245 :::::::::GN::::I::::P:::::::::GG:L:L:::::::::::::::E:::P::R: HVO_0054 :::I::::::S:::::::V:::::::::::::I::::::::::::H::::::::AD:S:: Hbo1439 :::I::::::R:::::::V:::::::::::::I::::::::::::::::::::::D:S:: NP0328A ::::::::::K:::::A:::::::::::::RA:::V:::::::::H:::::::::PI:R: rrnAC2701 ::Q:S:::::::::::A:::K::::::::::::::V:::::::::H:::::E:::P:AE: Hut2190 ::QFA::::::::::::::::::::::::::::L:V:::::::::L:V:::E:::D:S:: Hmu3063 ::Q:A::::::::::::::::::::::::::::L:V:::::::::L:V:::E:::::E:: consensus ADVEVPLYPAAEQQADDGDYVETTIGEAVDDGIIGSEWVAYYLGVAKEWYERIGVDMDRF #oth 2.14241.2144.3322133524.2311122231243.21.111213211231.2.2... VNG2352 ::::L::::VDA:::AGEE:LRL:PQ::LAE:VV:G:::::F:ARS:Q:F::V::::::: HQ3709A ::IT:T::S:RQ::::::::I:::V::::ES:L::DG:IG:FI:I:Q::::T::::T::: hla0245 R::S:R::::T::::E::E:::::::::::EE::::P::G::::::::::D:::::L::: HVO_0054 E::::L::::T::E:::::::::::::::::::::NA:LG:F::I:Q::::TV::::::: Hbo1439 E::A:L::::T:::K:::::I:::::A::E::S::NA:LG:F::I:Q:::::V::::::: NP0328A ::::L:::SV:N:N:EN:GVETY:VA::::S:::E:::::::::RSMDF:::::I::::: rrnAC2701 E::VL:::A:::::T:::GQR:L:VR::::ED:VE::::::::::S:::::::::::::: Hut2190 :::TAQF:::EA:DRA::EP::M::::::E:::VADP:I:::::::A:::AA::L::::: Hmu3063 :::TA:F::::D:E:A::QPY:A::R:V::::VV:KP:I::::::::Q:::S:::::::: consensus RFRQHLAGERAHYASDCWDAESEV-----DGDWIEIAGFAYRSDYDLSKHDEYSDDEFTV #oth .1...12..1...13......31111111111.1.23.111.31......2412323112 VNG2352 ::::::P::L:::::::::::G:::::::::::V:LE:V:S:T:::::::::HA::S::: HQ3709A ::::::S:::::::T:::::::::::::::::::::::::::GE::::::A::G::::SI hla0245 :::::::::::::::::::::::::::::::::::::::S::A::::::::::G::A::: HVO_0054 :::::::::::::S:::::::::::::::::::::::::S::::::::::G::G::D::: Hbo1439 :::::::::::::S:::::::::::::::::::::::::S::::::::::A:::EEDY:: NP0328A :Y::::P:::::::A::::::T:L:::::G:S:V:VT:::::::::::::GD::KE:::L rrnAC2701 :Y::::::::::::::::::::::::::::::::::T:::::G:::::::AKH:GEDY:: Hut2190 :::::RP::L:::SE::::::GD:SDPDE:P::::LG:::::A::::::::AH:EA:::I Hmu3063 ::::::S:::::::A::::::A:::::::::::::LG::::::::::::::S:::E:::: consensus FKQYDEPKTVERATVDPDMSYLGPEFGGAAGDVADALEALAERDPDAFDGDEVTVEVDGE #oth .23.1112..1112...1.22...1..23.12113..13..21112..2422.312.1.2 VNG2352 :QA::::::::::S:::E:::::::::::::::::::A:::A::RA:::::::::D:::: HQ3709A :QE:E:S::::::V::::::V:::K::SQ::EIKT:::T::::N::::SEET:D:S:::: hla0245 ::R:::::::::::::::::V:::::::D:AA::E:::T::::::::::SET:S:::N:D HVO_0054 :Q:::::::::::V:::::AT::::::AQ:A:::E:::T::::::::::A::::LD:::: Hbo1439 :R:::::::::::V::::::V:::K::::::::K::::R::::::::::::::::::::: NP0328A :R::::::::::::::::::::::::::::::I:A:::S::G::RS:::::::::::::D rrnAC2701 :::::::I::D:::::::::::::::::S::A:::::::::::N:::::D:::::::::K Hut2190 :::::D:V:::QP::::E:G::::::::::::::::::::::D:::::A:ED:::::::: Hmu3063 :::::::V::::::::::::::::::::S::A:::::::::::::::::ES::V:::::: consensus AHTVPVEVTNFAVEEVTENGEHITPHVVEPSFGIDRTVYTLLAHSYEEDEVDGEERTYLS #oth 541.211411.41223122.1.13...1..11.11.32112.2.2132.1..2.3.21.4 VNG2352 :Y:::T:R:G:E:A:E::S:R::I::::::A:::G:A:::A::::::A::::::P:DV:R HQ3709A IM::D::E:::HI:SK:V:::::::::I::::::::::::::::G:R::T::N:T::::: hla0245 DQ::DTD:A::S::T:::::::L::::::::::VG:::Q:::::A:S::::::::::::: HVO_0054 EI::DTD:A:::::TQ::A:::::::::::::::::::::::::A::T::::::A:S::: Hbo1439 T:::ETD::::::::Q:I:::::::::::::::V::::::::::A:::::::D::::::: NP0328A EY:::::R:G:::::Q::A::::::::::::::VG:L::SV:V::HGT:T::D::::::D rrnAC2701 S:::::DK:::S:D:::::::::R:::::::::VG:II::V::::::T:::::::::::D Hut2190 :Y:::::Q:G::I:::::S::::M:::::::L::::AL::A:D:::R::::::::::::E Hmu3063 S:A::::K:::G::::I:S::::::::::::L::::AL::A:D:::R::::::::::::A consensus LPPEVAPTTVGVFPLMDN-DGLGELARDIAAELRAAGLAVAYDDSGSIGRRYRRQDEVGT #oth .2332..2211....2222231413.322233..11.22.21..1.2..........1.. VNG2352 ::A::::::::::::::K::::::R::E::::::::::::T:::::N::::::::::::: HQ3709A :STK::::D::::::IS:VEQ:V:Q:K::VS:::::::S:VA:::::::::::::::I:: hla0245 :E:::::QDAA::::VT:D:R:T:::DRV::D::E::V:::::::::::::::::::I:: HVO_0054 :S:S::::N::::::VS:V:::VD::D:V:E::::::F::V::::::::::::::::::: Hbo1439 :S:::::RD::::::VS:VPE:VD::DE:VDD::::::S:V::::::::::::::::::: NP0328A ::A:L:::::A:::::TK::::DDR::EVSET::E::FE:::::T:N::::::::::::: rrnAC2701 ::::Q::::::::::::K:::MAD::T:::DD::::::S:T:::::A::::::::::::: Hut2190 :::A:::::::::::::K::::::R::E:::::::D::::::::::A::::::::::::: Hmu3063 ::Q::::::::::::::R:::M::Y:::LVEK::::::::T:::::A::::::::::::: consensus PFCVTVDYDGLEDD---------------------------------GPDTVTIRERDST #oth .1.1.1.12321332211111111111111111111111112212224341..2.2..12 VNG2352 :Y::::::EA::EG:::::::::::::::::::::::::::::::::---A::L:D::T: HQ3709A :::I:::R::I:GT:::::::::::::::::::::::::::::::::D:::::::Q::TG hla0245 :::::I:R::I:G::::::::::::::::::::::::::::::::::::E:::V:::::A HVO_0054 :::I:I:R::::G:::::::::::::::::::::::::::::::::::A::::::::::G Hbo1439 :::I:::R::::S:::::::::::::::::::::::::::::::::::ET:::V:::::G NP0328A :Y::::::ETQ::G:::::::::::::::::::::::::::::::::---:::::::::: rrnAC2701 :Y::::::ES::::SEAQRASDSASSAEPRSANRSSGQSPREDGDEPRAG:::V::::T: Hut2190 :Y:::::::T:::G:::::::::::::::::::::::::::::::::---:::::D:::: Hmu3063 ::::::::AT:GEARD:::::::::::::::::::::::::DEGEPAA:::::V::::T: consensus RQVRVPVADLAETLEALRDGDRTFDDL-------------- #oth 6.3.2123413531541351354133142422423422222 VNG2352 T:::::I:EV::::VG::::ELR:EA::::::::::::::: HQ3709A ::::A:I:VVT:LIQSVQSDEII::N:TDAYDAVEWANKSE hla0245 V:::::AEE::TE:T:::T:-GE::A:VDRYETVATDVETN HVO_0054 K:::L::D::VG::VG::A:TAS:::VLDDNEVVEA::::: Hbo1439 ::I::::SA::DE:G:V:G::::::::AAEYDELTDD:::: NP0328A D:T::::EG:PAAIAE:V::-A:LAE::::::::::::::: rrnAC2701 E:K:L:IDG::::::Q:ST:::::::::::::::::::::: Hut2190 D:T::AAD:::S:I:::VE::S::QN::::::::::::::: Hmu3063 A:K:::::::P:::T:::::E::::::::::::::::::::