|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2891 | VNG2541 | HQ1058A | NP1174A | hla0813 | HVO_1804 | Hbo1680 | Hmu0394 | Hut1672 | rrnAC2241 |
1746 | VNG2541 | 2236 | 1503 | 1542 | 1574 | 1589 | 1607 | 1568 | 1564 | 1512 |
2212 | HQ1058A | 1503 | 2924 | 1929 | 2058 | 2041 | 2156 | 1915 | 1878 | 1985 |
2355 | NP1174A | 1542 | 1929 | 2869 | 2134 | 2084 | 2113 | 2048 | 2062 | 2108 |
2458 | hla0813 | 1574 | 2058 | 2134 | 2907 | 2245 | 2242 | 2078 | 2063 | 2102 |
2457 | HVO_1804 | 1589 | 2041 | 2084 | 2245 | 2906 | 2349 | 2165 | 2075 | 2110 |
2484 | Hbo1680 | 1607 | 2156 | 2113 | 2242 | 2349 | 2887 | 2133 | 2086 | 2180 |
2384 | Hmu0394 | 1568 | 1915 | 2048 | 2078 | 2165 | 2133 | 2944 | 2167 | 2298 |
2322 | Hut1672 | 1564 | 1878 | 2062 | 2063 | 2075 | 2086 | 2167 | 2935 | 2259 |
2405 | rrnAC2241 | 1512 | 1985 | 2108 | 2102 | 2110 | 2180 | 2298 | 2259 | 2909 |
394 symbols consensus MTE---FDIVGPEAIRDGRATDAYFERTEEALEHAGKNPHVVAEVTADQFPDGDFELLAG #oth 132211113244421341411111131133214113211522111212112214333311 VNG2541 ---:::------------------------------------------------------ HQ1058A -MD::::::IDT:::TS:T::::::::::TT:Q::DR::TIT:::::::::::N::MI:: NP1174A :--:::::T:PGS::ES::::::::L::::::::::R::::::::::::::T:E:::::: hla0813 ::::::::::DAA::::::::::::::::A::::::R::R:::::::::::::::::F:: HVO_1804 :SD:::::::::::::::V::::::::::AT:R::::::R:::::::::::::::::F:: Hbo1680 -MD::::::::TD:::::S::::::::::TT:R::E::::::::::::::::::Y::::: Hmu0394 :::S::::::S::Q::S::::::::D::I:::D::::::::::::::::::T:EW::::: Hut1672 :::ETP:::::::::TA::::::::D::M::::::::::N:::::S:::::T:E:AV::: rrnAC2241 :::E::::V:S:::::E::::::::D::M::::::::::D:::::::N::AT:QWK:::: consensus LKDAAALLEGRDVDVDALPEGRLFDGGPVMRIEGPYLEFARLETSLLGFLSHASGMATAA #oth 222125122125211223221311121112..2.5.23.2.2..11......21.3..2. VNG2541 -----------------------------:::T:::QS:::Y::A::::::::::::::: HQ1058A V:N:V::::::N:::NS:LP:::::::::F::Q:K::D:::::::I:::::::::V:::: NP1174A :E:::R::::::I::::::::T::::::::::::::::::::::::::::::PT:::::: hla0813 ::::V:::::::I::::I:::::::::::::::::::T:::::::::::::::::::::: HVO_1804 V::::E::A:::I::::M:::T::::::::::::D::::::::::::::::::::C:::: Hbo1680 V:::::::::H::::::I::::::::::::::::S::D:G:F:::::::::::::V:::: Hmu0394 :::::H:F:::G:::::I:::::::::::A::::::R::C::::A::::::::T:V::R: Hut1672 :::::H::::HP:::::::::Q:::H::::::::Q:Q:::::::::::::::PT:I::N: rrnAC2241 :::::K:::::S:::::::::Q::::::::::::A:R::C::::A:::::::ST:I::R: consensus LEARRAAPDSTVLSFGARHVHPSIAAMVERSALIAGLDGFSHVAAGDVLDREAGGTMPHA #oth 142.5...2131....1.....2231311.1..21.2..1.11...12111311...... VNG2541 :A::::::::HL::::::::::::::V:::A:::G:F:::::::::::::::P::::::: HQ1058A AN::K:::S:::::::::::::T:::::::::::::V:::::M::::::::T:::::::: NP1174A ::::Q::::TSL:::::::::::::GT:D:::::::F::::::::::I:::::S:::::: hla0813 :DC:V:::::Q::::::::::::MT:A::::::VG:F::::::::::LIG:::S:::::: HVO_1804 ::::S:::::::::::::::::A::::::::::V::::::::::::EI:GK::S:::::: Hbo1680 :DV:::::::::::::::::::ALT::I:::::L:::::I:::::::::G:::S:::::: Hmu0394 ::::::::::Q:::::S:::::::G::::::::L:::::I:N::::E::::A:::::::: Hut1672 :R::::::E:::::::S::::::LG:::::::::G::::I:N::::E:I::::::::::: rrnAC2241 ::::H:::E:::::::S:::::::S::::::::LG::::I:N::::E:I::D:::::::: consensus LLICFGRGNQEAAWRAFDEAVDEDVPRIALCDTYSDEVDEALRAVEALGDDLDSVRLDTT #oth .3.1..1.1.13.12..221.4341..11.1...2..31.321.13331321221.1... VNG2541 :V:::::::::::::::TDG:GD::::::::::::::K::V::::DE::::::A:::::: HQ1058A ::::::::E::Q::Q::::::P:A:::::::::::::A::::::ART:::R::G:::::: NP1174A :M::::P::::E::Q::::::AP:::::::::::D::::::V::A:L---GF:::::::: hla0813 :S::::::E::::::::N:::::A::::::::::::::::T::::D::::R::G:::::: HVO_1804 :::A::::::AE:F:::::::::::::V::::::G::TE:V:Q::::::::::::::::: Hbo1680 :::::::::::E::K::::::E:S:::V:::::::::T::V::::::::::::::::::: Hmu0394 :V:::::::::D::::::::::A:::::T:::::::::::S:::AA:I-E::E:::I::: Hut1672 :V::::::::::::Q::::::GPG:::V:::::::::::::I:::::V-P::::I::::: rrnAC2241 :M:::::::::Q::Q:::A::P:ET::V::T::::::T::::::A::V-:::TG:::::: consensus GSRRGDFRHIVREVRWTLDARGHEDVDIFVSGGLGPTDLRELRDVADGFGVGGYVSNADP #oth 1......21.32.11.3.1241221.2212...13.43124.21.11...1.1212..3. VNG2541 S:::::::::A:::Q:A:::G:NS::SV::::::T:::::G::::V:::::::F::::T: HQ1058A :::::::Q::I:::Q::::TH:Y:::::::::::N:N::LN:::::::::I:::I::::: NP1174A :::::::::::::T::K::VA::::::::::::IT:EAI:N:K:::::::::SHIT:::: hla0813 ::::::::::I:::Q:E::V:::D:::VY:::::::A::::::::V:::::::::::::: HVO_1804 S:::::::::::::::E:::::::::G:::::::::AE::H::::VE::::::HI::::: Hbo1680 S:::::::::::::Q:::N:HD::S::V::::::::S:::H:::::::::::::::::N: Hmu0394 :::::::E::LK::::::::H:::::G::A:::::::E:AR:SG:VE::::::::::::: Hut1672 S:::::::R::Q::::E::::::D::G::L::::D::T::::::::::::::::::::E: rrnAC2241 ::::::::::::::::::::Y::::::L:L:::IT::T:::::::::::::::::A:::: consensus VDFALDIVEVDGEPAAKRGKLSGTKAVYRTADGGHHVGLADRDGPDDAESLLEPLIRDGE #oth 2..1....32311.1......2.4.4....42.2.211.33343.31232.21.121..3 VNG2541 :::G::::::A:::::::::::::::::::P::::::A::SQPA:A::TA:::::LV::T HQ1058A ::::::::A::D::V::::::A:I:S::::SE::::I::HNQPS:::S::::N:V::::K NP1174A ::::::::::E:D:::::::::::::::::T:::::IA:::A:P::::DP:::::::::D hla0813 ::::::::A:E::::::::::::A:D:::::::V:A::::::S:::G::::M::V::::: HVO_1804 ::::::::::N::::::::::::V:E:::::::::::::RG:P::T:G:::::::::::: Hbo1680 :::::::::I:::::::::::T:V:E:::::::::::::E:A:S:T:::P:::::::::: Hmu0394 ::::::::::E::::::::::T:::Q::::P:::::::::::A::T:GQA:::::V:::T Hut1672 K:::::::SI::::V::::::::K::::::DT:S:E:::::EE::G:::::F:::L:::: rrnAC2241 L:::::::QL:::::::::::T:::S::::::::::I::::::::A:::::::::::::: consensus VVRE--FDLDAAAERARADAERVGF-GVN----- #oth 21433212132.35..44.133121336654311 VNG2541 :SMA::::I:D::A:::Q::RA:S:RQ--::::: HQ1058A ::DHID:GI:::V:::TQ:RN:CKY:EI:IE::: NP1174A I:AD::VE:S:::::::::::::::::EH::::: hla0813 ::ADDA:::A::T:::L::::T::Y::T:E:::: HVO_1804 ::S:FD::I::::T::SE:::S:::G::SEE::: Hbo1680 I::::::::::::A::::::::C:Y::AE::::: Hmu0394 :::::::::::::Q::AD::DA:::EP:DGGTKA Hut1672 L:::::::I:D:TR:::K:::A:::::DHADQ:: rrnAC2241 I::::::::NG:ID::A:::::::YE::TVAE::