|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3166 | VNG2131 | hla0355 | HVO_0321 | Hbo1158 | HQ3241A | NP0270A | Hut2718 | rrnAC3164 | Hmu2584 |
2748 | VNG2131 | 3342 | 2643 | 2509 | 2613 | 2612 | 2581 | 2489 | 2475 | 2486 |
2793 | hla0355 | 2643 | 3156 | 2631 | 2726 | 2684 | 2536 | 2513 | 2514 | 2486 |
2765 | HVO_0321 | 2509 | 2631 | 3154 | 2708 | 2698 | 2570 | 2395 | 2416 | 2437 |
2837 | Hbo1158 | 2613 | 2726 | 2708 | 3193 | 2840 | 2567 | 2526 | 2470 | 2547 |
2819 | HQ3241A | 2612 | 2684 | 2698 | 2840 | 3170 | 2561 | 2501 | 2438 | 2470 |
2778 | NP0270A | 2581 | 2536 | 2570 | 2567 | 2561 | 3138 | 2475 | 2509 | 2488 |
2693 | Hut2718 | 2489 | 2513 | 2395 | 2526 | 2501 | 2475 | 3166 | 2570 | 2587 |
2681 | rrnAC3164 | 2475 | 2514 | 2416 | 2470 | 2438 | 2509 | 2570 | 3174 | 2666 |
2670 | Hmu2584 | 2486 | 2486 | 2437 | 2547 | 2470 | 2488 | 2587 | 2666 | 3146 |
440 symbols consensus ----------------------MSEDAEEASEDRRKYEFRKVIEELRDYEGSGTQLVTIY #oth 11111111111111111111232132433425.11....2....2.3213.......1.. VNG2131 MPQPRRSTGSKLTYRPVGYVNA:::QD:VP::::::::::::::::K::::::::::::: hla0355 ::::::::::::::::::::::::S::Q:::D::::::::::::::::F::::::::::: HVO_0321 ::::::::::::::::::::::::S::::::::::::::K::::D::E:::::::::::: Hbo1158 ::::::::::::::::::::MV::T::GD:N:::::::::::::::D::::::::::::: HQ3241A ::::::::::::::::::::::::T:::DV:N:::::::::::::::E:::::::::::: NP0270A ::::::::::::::::::::::::::DG:P:-:KQ::::Q::::::DE:S:::::::S:: Hut2718 :::::::::::::::::::::MS:QEGH:GQT::Q:::::::::::E:FD:::::::::: rrnAC3164 :::::::::::::::::::::::::QQ:QEQS:KQ:::::::::::KG:Q:::::::S:: Hmu2584 ::::::::::::::::::::::-MSES:QEQS:KQ::::K::::K:KG:D:::::::::: consensus IPEDKQISDVVAHVTQEHSEASNIKSKQTRTNVQDALTSIKDRLRYYDTFPPDNGMVLFS #oth 1.21211....2.111.....1.....1...1.....1.1....1..124..11.2.3.. VNG2131 ::P::::::::::::::::::::::::::::::::::::::::::::::::::::::V:: hla0355 ::::R:V::::::::::::::::::::::::A::::::::::::::::::::E::::I:: HVO_0321 :::::::::::E::IT:::::::::::::::::::::::::::::::GN::::::I:M:: Hbo1158 ::D::::::::::::::::::::::::::::::::::::::::::::::::::::I:I:: HQ3241A ::P:R:V::::::I:::::::::::::::::::::::::::::::::::Y:::::I:::: NP0270A V:::R::::::Q:::::::::A:::::::::A:::::K:L::::K::::::::R:::::: Hut2718 V:D:T::::::::::::::::::::::D:::::::::K::::::::::NK::E::L:::: rrnAC3164 :::G:L:::::::::::::::::::::D:::A::::::::::::::::VR:::::L:V:: Hmu2584 V::::::::::::::::::::::::::::::::::::::::::::::GNA::E::::::: consensus GAVDAGGGQTDMVTRVLESPPDPIQSFRYHCDSDFLTEPLEDMLADKGLFGLIVLDRREA #oth ..2221..1.2.1.22.1...2.11........4..13..33..4.1..1..1......1 VNG2131 ::::S:::R:::::E::::::Q::E::::::::A::::::AE::G::::Y:::::::::S hla0355 ::I::::::::::::T:::::Q:VE::::::::A:::::::H::E:S::::::::::::: HVO_0321 ::::::::::T:::K::::::E:::::::::::N:::G::::::M::::::::::::::: Hbo1158 :::NS::::::::::::D:::E:::::::::::N:::Q::::::S::::::::::::::: HQ3241A :::ST:::::T::::S:::::E:V:::::::::::::D:::::::::::::::::::::: NP0270A ::::::::::::::E::::::::::::::::::H::::::QE::G::::Y::V::::::: Hut2718 ::::T:::R:::I::::::::Q:V::::::::::::L::::G::E::::::::::::::: rrnAC3164 ::F:T:::R:::::K:::::::::E::::::::E:::::::H:::::::::::::::::: Hmu2584 ::::SS::R:E:::E:::::::::E:::::::::::::::DE:::::::::::::::::: consensus NVGWLKGKRVEPVKSASSLVPGKQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFVPK #oth .....1....2.....1.................................1..1....33 VNG2131 ::::::::::Q:::::E::::::::::::::::::::::::::::::::::::D:::::: hla0355 :::::::::::::::::::::::::::::::::::::::::::::::::::::D::::D: HVO_0321 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1158 :::::R:::::::::::::::::::::::::::::::::::::::::::::::::::::E HQ3241A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0270A ::::::::::::::::::::::::::::::::::::::::::::::::::E::D:::::: Hut2718 :::::R::::D::::::::::::::::::::::::::::::::::::::::::::::::E rrnAC3164 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::AD Hmu2584 ::::::::::::::::::::::::::::::::::::::::::::::::::E:::::::SR consensus RHEMDGILVGGPSPTKDEFLDGDYLHHELQDMVLGKFDVAYTDESGLYDLVDAAQDVLAE #oth ..122.1.....................11.4.1....11.......3....21321..1 VNG2131 :::I:::::::::::::::::::::::::::K:::::::S:::::::S:::::G:AA::: hla0355 :::L:::::::::::::::::::::::::::K:::::::::::::::K::::N:SEA::D HVO_0321 ::D::::::::::::::::::::::::::::L:V:::::::::::::::::::G::A::D Hbo1158 ::::G::::::::::::::::::::::::G:L:V:::::S:::::::::::::::E:::D HQ3241A :::I::V::::::::::::::::::::::G:V:V:::::S:::::::H::::S::::::D NP0270A ::::::::::::::::::::::::::::::::::::::IS::::::::::::::E::::: Hut2718 ::DL::::::::::::::::::::::::IG:::::::::::::::::H::::::EE:::: rrnAC3164 :::I::::::::::::::::::::::::::::::::::::::::::::::::::D::::: Hmu2584 ::::N::::::::::::::::::::::::G:N::::::::::::::::::::::SE:::: consensus QEVMKDKAQMEEFFEELHDGDEATYGFDQTRQNLIMGSVDRLLISEDLRKDVVVYECPNG #oth 41334..56.12..13.14.431....22..3..3..1.11..2.....2.22312.322 VNG2131 ADL:D::SD::::::::NG:KL:::::E:::R:::::::::::V:::::E:::I:::::D hla0355 ::IVE::RH:D::::N::T:E::::::::::R:::::::::::::::::S:::::::::: HVO_0321 :::I:::K:::::::K::R:N:S::::EA::K::V::::::::::::::::IA::D:-G: Hbo1158 :::::::S:::::::K::T:EQ:::::GP::K:::::::::::L:::::S:::::::::: HQ3241A ::::::::E::::::K::G:E::::::EP::K::M::A:::::L:::::S::::::::D: NP0270A T:::::::E::::::Q::::QK::::::A:::::M::::::::::::::::::TFD:-GS Hut2718 R:MLQ::QV::R::K::::::L::::::::::::M::::EQ::::::::::A:T:::A:D rrnAC3164 H:MLR::EL::D::KQ::N::K::::::::::::N::A:EQ::::::::::::A:T:E:: Hmu2584 H:ILQ::EA:::::K::::::L:::::GP::E::::::::::::::::::::LT:T:E:: consensus HEEYELVDRRADTPDHTCSDCGE--EAEEGEREDAIEHLMEIAEQRGTETKFISTDFEKG #oth 21.113112124314.2.3311211432651...1.12.131.2...1113.1....... VNG2131 :::::TI:::NTS:E::::::::::::T:VD:::::D:::S::D::::::H::::::::: hla0355 :::::V::S:HS::S:E::E:::::::DVD::::V:::::S:::::::D::::::::::: HVO_0321 Q:::::::H:H:::T:E:D:-:S:::::LKD:::V::W::DL:D:::::::::::::::: Hbo1158 :::::V::::HGD:G:D:TE::::::::KTD:::V::::::::::::::::::::::::: HQ3241A :::::VI:::H:D:E:::::::S::AS:KT::::V::Y::S::::::::::::::::::: NP0270A R:::::I:::::::::::E:-:S:::G:AV::::::D::::L:::::SDV:::::::::: Hut2718 :::H:::::S:E::E::::T:S:::TV:T::::::::::IG:::::::::V:V::::::: rrnAC3164 :D::D:INSS:G:D::E::R::ATVD:DD:::::::D::::L:D::::::V::::::::: Hmu2584 :D:::M:::S:SID::D::R:S:TVP:::A::::::D::::::Q::::::L::::::::: consensus EQLLTAFGGIAGILRYSTGV #oth ...23....2..1...1..1 VNG2131 :::::::::Y:::::::::: hla0355 ::::D::::::::::::::: HVO_0321 :::YD::::::::::::::: Hbo1158 :::YD::::V:::::::::: HQ3241A :::HN:::::::::::A::I NP0270A :::::::::::::::::::: Hut2718 :::::::::V:::::::::: rrnAC3164 :::::::::V::L::::::: Hmu2584 ::::S::::V::L:::::::