|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2425 | VNG2106 | hla0502 | HQ1352A | HVO_0469 | Hbo1007 | NP1316A | rrnAC2514 | Hmu3022 | Hut1956 |
1982 | VNG2106 | 2427 | 1810 | 1794 | 1851 | 1841 | 1809 | 1796 | 1778 | 1764 |
2019 | hla0502 | 1810 | 2747 | 1905 | 1896 | 1920 | 1836 | 1825 | 1877 | 1839 |
2087 | HQ1352A | 1794 | 1905 | 2417 | 1918 | 2021 | 1800 | 1878 | 1891 | 1826 |
2101 | HVO_0469 | 1851 | 1896 | 1918 | 2425 | 2081 | 1811 | 1890 | 1880 | 1840 |
2149 | Hbo1007 | 1841 | 1920 | 2021 | 2081 | 2613 | 1864 | 1958 | 1941 | 1883 |
2034 | NP1316A | 1809 | 1836 | 1800 | 1811 | 1864 | 2444 | 1924 | 1875 | 1902 |
2099 | rrnAC2514 | 1796 | 1825 | 1878 | 1890 | 1958 | 1924 | 2465 | 1988 | 1908 |
2083 | Hmu3022 | 1778 | 1877 | 1891 | 1880 | 1941 | 1875 | 1988 | 2432 | 1963 |
2040 | Hut1956 | 1764 | 1839 | 1826 | 1840 | 1883 | 1902 | 1908 | 1963 | 2418 |
355 symbols consensus -------------------------------------MTTLGTASAAPGEIDTGRLEVGE #oth 1111111111111222221122221121112222221.211.1.2.3...512...41.. VNG2106 :::::::::::::::::::::::::::::::::::::::S::::::::::F:S:::T::: hla0502 VRRGRRYRHLERCGDKGCVGGSPRTERIKGRPAHIRV:I:::::R:P:::T::::::::: HQ1352A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::I:: HVO_0469 ::::::::::::::::::::::::::::::::::::::I:::::::::::M:V::::::: Hbo1007 :::::::::::::MGSTGVGSGHDTEPIKGDATQCLV:IS::S:::::::V::::::::: NP1316A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::P::: rrnAC2514 ::::::::::::::::::::::::::::::::::::::V:F:::T:::::K::::::::: Hmu3022 ::::::::::::::::::::::::::::::::::::::V:::::T:Q:::T:::::A::: Hut1956 :::::::::::::::::::::::::::::::::::::::S::::::D:::VA::::Y::: consensus TRDGSTVGLPVAVVNGASDGKTLYLQAASDGDELNGVGVIQRVVPQLDPAEISGTILIVG #oth 2...2421..1..11.341.3...3..1........2..22.23.11..2311.32.21. VNG2106 ::::T:L::::::::::R::::::M::::::::::::::VR:::::::::::A:E::::: hla0502 :::::P:R:::::I:::E::E::::::V::::::::L::VN::::R:::::L:::V:V:: HQ1352A ::::T:::::C:::E:::::Q:::V:::::::::::I::LN::I::V:::VL:::V:A:: HVO_0469 S:::GS:::::::I::::S:::::M:::::::::::::::::::::::::D:::A::V:: Hbo1007 ::::T:::::C:::::::::::::::::::::::::::::::LF:::::T:L::Q::::: NP1316A A::::E:::::::I::QA::::::M::V::::::::L:::R:L::::::TK:A:EL:::: rrnAC2514 ::::::F:::::::::ID::R:::I:::::::::::::::::TL:::::M:L:::::VC: Hmu3022 :::::E:::::::::::D:::::::::::::::::::::V:::::R:::::::::::V:: Hut1956 :::::D::::::::::TE::::::::::::::::::::::::L::R:::T:::::::::: consensus IVNYHAFQVAEHRNPIDDTKMNRAYPGNETGTSSERIAAATFDAAKRADLVLDLHQGSTS #oth 12.131.11.1....1..1.1..1...436.12.....11..5..43..111........ VNG2106 :A:LP::R::::::::::::L::::::TAD:S::::::H:::T::ES::::V:::::::: hla0502 V:::F:::::::::::::R::::G:::::G::T:::::H:::Q:::Q:::I::::::::: HQ1352A :::::G::I::::::::::::::::::::S:::::::::V::A:::::::I::::::::: HVO_0469 ::::::::::Q::::::::::::::::D:R::::::::::::A::RD:::IV:::::::: Hbo1007 ::::::::::Q::::::::::::::::D:N:::::::::::::::R::::I::::::::: NP1316A :T::Y:::::::::::::::L::::::SK:::A:::::::::::::Q::::::::::::: rrnAC2514 V::::::::::::::V:::::::::::DK:::::::::::::N::IS::Y:::::::::: Hmu3022 ::::::::::::::::::::::::::::DE:::::::::::::::T:::::V:::::::: Hut1956 :::::::::::::::::::::::::::E::::T:::::::::E::T:::::V:::::::: consensus RMIDEVRVRCGRRHRLHDECLELAKVFGCGYVLDQKGPDGQLARAAPDEGVPTIDPELGG #oth 2..1.2.....21.11.53..3...2.11.211.2...1.....11.24.1..1...... VNG2106 :::N::::::::H::::SQ:::::::::T:H::::::::::::::G:NT::::::::::: hla0502 :::N:T:::::V::H::GD::::::A::::H:::I::::::::::G:EH:I::V:::::: HQ1352A Q::::::::::::::::::::G:::T::::::F:::::N:::::V:::::I::V:::::: HVO_0469 ::::::::::::H::M:AK::R:::T:::::::::::::::::::G::A:I::::::::: Hbo1007 Q:::::::::::H::::S:::Q:::T::::::::::::::::::::::::I::V:::::: NP1316A C::N:T:::::T:::::RD:::::::::::HI:::::::::::::::::::::::::::: rrnAC2514 Q::::::::::T:::::E:::::::::::::I:::::::::::::::::::::::::::: Hmu3022 Q::::C:::::T:::::::::::::::::::I:::::::::::::::::::::::::::: Hut1956 :::::T:::::T:::::::::::::A:D::T:::K:::::::::::::D::::::::::: consensus CVGWDEESIQKGVRGVFNVLRHYGFLDGDVDTERQTRARGFDQYGSPAGGLVDFERDLGD #oth 11.1.33..44..4..3...23.2.121543543.1..32.11..1.2...121353..1 VNG2106 :::::AD::EY::T::::::::::::::::::TE:V:::E::R::::::::::YAVE::: hla0502 :::::::::RY::E:::::::::::::::IEL:::V::::::::::::::::R:::E::E HQ1352A :I:::G:::DI::::::::::E::::E:T:SKS::::::::::::::::::IQ::AE::E HVO_0469 :::::::::E::::::H::::G:D::::::ELKA:::::::::::::V::::R:K::::E Hbo1007 ::::::::::::::::Y::::G:::I::S:E:::::::K::::::A:T::::R:KKS::E NP1316A A:::::T::R:::K::::::YY::::::N::P:P::::T::E:::::::::::::F:::: rrnAC2514 ::::::D:::R::D::::::H:::::::HY::RP::::T::E:::::V:::I::KP:::: Hmu3022 ::::::Q:::L::E::Y::::Y::::AESHSF:A::::::::::::::::::::QKQ::: Hut1956 A::F:Q:::KI::T::R::::::N::::EAPM:P::::SS:::::A:::::::::P:::: consensus RVSAGDTLFEVTDVFGTLKARVTADSNGIFWRARRLPQVATGEYVCSVGTNIDTY #oth 2152.1311311.2..53.231..144.1...3..1....2......1.242.32 VNG2106 ::D:::A::D:::P::M:::T::::R::::::S::K:::::::::::::ARV::: hla0502 :::T::L:Y:::::::E::::::::DD:V:::T:::::::A::::::::::V:K: HQ1352A :IKT::V::::::I::E::::I:::ND:V:::S:::::::::::::::::SV:S: HVO_0469 ::::::VV:::A:::::::::::::H::::::::::::::S::::::::IDL::: Hbo1007 Q:::::VV::I:::::G::::::::NT:::::S:::::::::::::::::G:::F NP1316A S:RR:::::KI::P:::V:E::::::E:::::H::::::::::::::L:::L:E: rrnAC2514 ::AR:E::::::::::DP::EI::::S:V:::::::::::::::::::::::::: Hmu3022 ::TR::::YTI:::::QQ:DV:::R:S:::::::::::::::::::::::D::SV Hut1956 ::DT:E:::T:::::::V:E::::::T:::::T:::::::::::::::::D::S: