| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3434 | VNG0415 | HQ1662A | NP1658A | Hut1342 | rrnAC0192 | Hmu0704 | hla2404 | HVO_1084 | Hbo0589 |
| 2497 | VNG0415 | 3716 | 2175 | 2270 | 2309 | 2268 | 2388 | 2187 | 2381 | 2295 |
| 2544 | HQ1662A | 2175 | 3547 | 2263 | 2283 | 2286 | 2248 | 2440 | 2465 | 2565 |
| 2733 | NP1658A | 2270 | 2263 | 3477 | 2455 | 2546 | 2628 | 2484 | 2507 | 2522 |
| 2875 | Hut1342 | 2309 | 2283 | 2455 | 3475 | 2738 | 2619 | 2532 | 2472 | 2445 |
| 2837 | rrnAC0192 | 2268 | 2286 | 2546 | 2738 | 3464 | 2835 | 2491 | 2548 | 2503 |
| 2781 | Hmu0704 | 2388 | 2248 | 2628 | 2619 | 2835 | 3474 | 2424 | 2480 | 2449 |
| 2880 | hla2404 | 2187 | 2440 | 2484 | 2532 | 2491 | 2424 | 3903 | 2663 | 2622 |
| 2902 | HVO_1084 | 2381 | 2465 | 2507 | 2472 | 2548 | 2480 | 2663 | 3459 | 2756 |
| 2861 | Hbo0589 | 2295 | 2565 | 2522 | 2445 | 2503 | 2449 | 2622 | 2756 | 3442 |
536 symbols consensus ------------------------------------------------------MTRRDP #oth 111111111111111112221222222222222222222222222222222343222332 VNG0415 :::::::::::::::::MNSHTNGVFRASVAGKCTSSCVGGIGRLLRRAPPVGG::DDHA HQ1662A :::::::::::::::::::::::::::::::::::::::::::::::::::MDNLS:DN: NP1658A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::E:G: Hut1342 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::D::: rrnAC0192 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::E:G: Hmu0704 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::D:G: hla2404 VYSRSRIYVSREPDGGRKRIHVRATLIDTLLLAPAAVADMTDDSEPAGDDDIAGLS:S:: HVO_1084 :::::::::::::::::::::::::::::::::::::::::::::::::::MTDAD:H:: Hbo0589 :::::::::::::::::::::::::::::::::::::::::::::::::::MDDLS:S:S consensus LAAVSPLDGRYARRTAPLVPYASEAALMRARVRVEVEYLLALADLDATPLSLDDDQRATL #oth .3.........131.21.3212..21.111.21..2..121.11.112123234541342 VNG0415 :Y:::::::::SG::DA:A::V::::::::::E::A::V::::::::V::E:VG:E:TA: HQ1662A :::::::::::SS::::::SHT:::::::T:L:::I:::Y::DA:EPISF:::PSD:D:: NP1658A :Y:::::::::::Y:E::TD::::::::C:::E::::::I::::::::::::TETT:EN: Hut1342 :S:::::::::::Y:D::::::::SG:I::::::::::::::::::::::EI:::::::: rrnAC0192 :::::::::::::Y:E::::::::R:::::::E::::::I:::::::::::I::G::::: Hmu0704 :D:::::::::::Y:E::::::::R:::::::::::::::::::::::::TI:AA::DH: hla2404 ::::::::::::A:::::S::::::::::::T:::::::IE::A:::::IA::EEAE:AF HVO_1084 :Y::::::::::S:::::A:HV::::::::::E::A:::::::::::::::FSESE::G: Hbo0589 ::::::::::::G::::::::::::::::::::::A::::::::::::::::S:EE:E:V consensus RALYEEFDAEDAALVKQLETEGAEGYSATNHDVKAVEYFLRERLP---------D-EDAH #oth 144144.132..321.21.11.23323........1...2.5531111111111244544 VNG0415 :DA:KT:::A::D:::RI:::::L:HA:::::::::::::::HA::::::::::-:AR:: HQ1662A KTTVNS::GD:::MI::I:V:::A:::::::::::I:::::IQT::::::::::-:SYI: NP1658A :DC:R:::::::DVI:::::S:YGD:E::::::::I:::I:MY::::::::::::EDEQG Hut1342 ::V::D::D::::::::I::::T:T:D:::::::::::::::::::::::::::ADL::E rrnAC0192 ::::::::D:::SV::::::::YGE::::::::::I:::I:LGM:::::::::::DL::A Hmu0704 :NC::A::E:::::::::::::YGE:A::::::::::::V:LH::::::::::::GL::A hla2404 ::V::::S::::R:I:A::V::::::A::::::::::::::V::DGLDDSGTIA:S:ALY HVO_1084 :::::::::D::D:::R::V:::A:F:::::::::::::I:TETD:::::::::-::SV: Hbo0589 :G::DS::GD::R:::R::::::::::::::::::::::V:TET::::::::::-::RV: consensus PWIHFGLTSEDVNNLAQRLLVKPAVEEVLVPELRDVRDALVSLAQEYRDTPMLARTHGQP #oth 3.2........1...12.112331243113.11143..4.233.222232....2..... VNG0415 S:::::::::::::::Y::::DG:ITA::T::::GL::D:::F:HD:A:L:::::::::: HQ1662A :::::::::::I:::SH:::IRSG:KN::::A::SL::E:::::::::K:::::Q::::: NP1658A ::V:::::::::::::H:::::::::D:::::I:SI::::ADS:R:H::V:::::::::: Hut1342 Q:L:::::::::::::::I:::::::D::L:A:::::::::E:::T:::::::::::::: rrnAC0192 N:::::::::::::::::::::::AQ:::I::::EI::T::EM:HT:A:V:::::::::: Hmu0704 N:::::::::::::::H::::G::::D:::::::A:::R::AF:HD:G:L:::::::::: hla2404 ::::::::::::::::::::::Q::S:AI::AI:E::::::D::::H:G:::::H::::: HVO_1084 :::::::::::::::::::M::G::::::::::::T::E:::::::F::V:::::::::: Hbo0589 ::::::::::::::::H:::A::::::::::AIE::::E:TA::R:H:A::::::::::: consensus ATPTTFGKEMAVYAARLGRALGRIEAAADGLSGKLAGASGTYAAHVAAYPDVDWRAFARS #oth .....1...1....2.1.2211.245.43212........11...5..1.2...221145 VNG0415 :::::::::::::::::::::A::TD:V:::T:::::::::W:::T::F::::::S::AR HQ1662A ::::::::::::::T:I:T:I:::TD:N:T:T:::::::::::::A::::::::::::Q: NP1658A :::::Y:::L::::::::Q::::L::::::IT:::::::::::::E::::::::Q:VS:: Hut1342 ::::::::::::::S:::::::::QW:T:::::::::::::::::H::::::::P:::LG rrnAC0192 ::::::::::::::S:::Q:I::V:R::E:::::::::::::::::::::::::PT::E: Hmu0704 ::::::::::::::S:::::IA:::::::D:::::::::::::::H::::E:::P:VSEA hla2404 ::::::::::::::S::::::::VVV:NGD:::::::::::::::D::::::::::::E: HVO_1084 :::::::::::::::::::T:A:V:::S:D:A::::::::V:::::::::G::::::S:E Hbo0589 ::::::::::::::::I:QQ:::VKE::AT:::::::::::::::::::::::::S:S:T consensus FVDSLGLEHEPLTTQVNPCDDLAALFDALRGVNNVLLDLDLDAWLYVSDRYLGQEAVEGE #oth ..52.1.324312..1......221.1.13.1.2214..12.2.1.1.3.....4222.. VNG0415 :::::::AYAEP::::::::::T:V:::VA:A:G::E::AV:::::::Q:::::D:AD:: HQ1662A ::TD:::N:VK:S::I:::::::::::::C::::MII:::R:::::I:N:::::QTTA:: NP1658A ::E:::::WRA:S:::::::::::V:::::::::::R:::::M:::::::::::KS:A:: Hut1342 :::::::D:::::::::::::::T::G::Q:A:RI:::::::::::::::::::RS:D:: rrnAC0192 ::GG:::::::::::::::::::V:::::::A::I:::::::V::::::::::::::::: Hmu0704 ::AD::::::::::::::::::E:V:::V::A::::R:::::M::::::::::::::::: hla2404 ::RG:D:::T::A:::::::::::::::::::::I:::::::::::::::::::RT:::: HVO_1084 ::G::::::TA:A:::::::::::::::V:::::::V:::R:::::::E::::::::::: Hbo0589 ::TD:::::TA:::::::::::::::::::::::::::::R:V:M:::Q:::::::TA:: consensus TGSSTMPHKVNPIDFENSEGNLSKANSDLTFLADYVTTSRLQRDLSDSTVKRNIGAAFAH #oth .................1....2..11..3..1112.1...............1.221.1 VNG0415 :::::::::::::::::A::::A::::::G::G:SL:::::::::::::::::::::::: HQ1662A :::::::::::::::::A:::::::T:::R:::::I:N::::::::::::::::::G::: NP1658A ::::::::::::::::::::::T::::::::::::::::::::::::::::::::S:::Y Hut1342 :::::::::::::::::::::::::::::D:::G:::N:::::::::::::::::G:L:: rrnAC0192 :::::::::::::::::::::::::::::R::G::::N:::::::::::::::::::::: Hmu0704 ::::::::::::::::::::::T:::::::::G::::::::::::::::::::::S:::Y hla2404 :::::::::::::::::::::::::::::::::::::::::::::::::::::M:::L:: HVO_1084 ::::::::::::::::::::::::::A::R:::::::::::::::::::::::::::::: Hbo0589 ::::::::::::::::::::::::::A::::::::::N:::::::::::::::::SS::: consensus CLIGYEKTQDGLDKVVPNEQVMREELEATPEVIGEAVQTILRREGDTDAYERVKELTRGR #oth 1.11.5.335..42.1..13.1222.332.121............232...11.32...3 VNG0415 ::LA:R:LG::::A:T:::A:L::D:R:N::::::::::::::::HD:::::::A::::E HQ1662A A::::K::T:::Q:::::QT::QS:::SH::L::::::::::::::V::::::::::::E NP1658A :::A:::::R::S::T:::A::Q:S:DDN::::::::::::::::::E::::I:A::::Q Hut1342 :::::::L:R::G::::::T::::D:::::A::::::::::::::Y:::::::::H:::E rrnAC0192 :::::S:C:N::A:::::::::ADD:AG:::I:::::::::::::YA::::Q::KA:::: Hmu0704 :::A:Q:C:S:::::::::R:::::::S:::IV::::::::::::HD::::Q::KA:::K hla2404 :::::S:AG:::AT:::::T::::::A:::::::::::::::::::::::::::D::::K HVO_1084 :::::K:::T::G::::::::::D::DD::AI:::::::::::::::Q:::::::::::: Hbo0589 :::::G::AA::::::::::::::::::H::L::::::::::::::AE:::::::::::: consensus RVTLDDFRDLFADLDVDESVRAELLALTPAGYTGIADELVDDI------------- #oth 32223..321113.11134112..4.11.34.1.3132212252211111111111 VNG0415 ::S::::KE:::S::I:ADT:D:::::::ER:V:V:ADIAR:A::::::::::::: HQ1662A D:A:T::H::::S:S:S::::D::Q::S:LT:::Y:S::::EVDETTDADAQDSYS NP1658A :A::A:::E::D::::::::K:::R::S:::::::GA::::ELDN::::::::::: Hut1342 SI:MA::EA::::::::PA::D::E:::::S::::::::A:VQ::::::::::::: rrnAC0192 E::IE::H:M::::::SDE:::::E::::TD:::::EQQA::S::::::::::::: Hmu0704 S::IE:::EMI:G:::S::::E::::V::T::::V::::A::V::::::::::::: hla2404 :::::::::::D::::::G::E::K:::::::V:V::::::E:DE::::::::::: HVO_1084 E::::::H::::::::::GT:E::::::::T:V:L::::::::EN::::::::::: Hbo0589 D::IE::::::DE:::::::::::R::S::T:V:LG::::G:L:::::::::::::