| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4481 | NP2726A | rrnAC0838 | Hut1505 | Hmu1325 | VNG1081 | hla1958 | HQ1873A | HVO_1469 | Hbo0080 |
| 3009 | NP2726A | 4448 | 2640 | 2565 | 2689 | 2572 | 2253 | 2411 | 2439 | 2480 |
| 3252 | rrnAC0838 | 2640 | 4695 | 2571 | 2804 | 2524 | 2497 | 2696 | 2704 | 2720 |
| 3122 | Hut1505 | 2565 | 2571 | 4450 | 2899 | 2434 | 2435 | 2498 | 2540 | 2538 |
| 3295 | Hmu1325 | 2689 | 2804 | 2899 | 4473 | 2566 | 2558 | 2680 | 2655 | 2687 |
| 2974 | VNG1081 | 2572 | 2524 | 2434 | 2566 | 4437 | 2440 | 2472 | 2622 | 2635 |
| 3224 | hla1958 | 2253 | 2497 | 2435 | 2558 | 2440 | 5042 | 2701 | 2933 | 2927 |
| 3281 | HQ1873A | 2411 | 2696 | 2498 | 2680 | 2472 | 2701 | 4743 | 2983 | 3173 |
| 3441 | HVO_1469 | 2439 | 2704 | 2540 | 2655 | 2622 | 2933 | 2983 | 4461 | 3153 |
| 3512 | Hbo0080 | 2480 | 2720 | 2538 | 2687 | 2635 | 2927 | 3173 | 3153 | 4451 |
708 symbols consensus ----------------------------------------------MTAPNRNTLWARTL #oth 1111111111111111111111111111112222222222222222122..3.2..1323 NP2726A :::::::::::::::::::::::::::::::::::::::::::::::AT::V::::GQ:V rrnAC0838 ::::::::::::::::::::::::::::::MGRGPAQIPADTRRAR:::::V:::::E:: Hut1505 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::TV: Hmu1325 ::::::::::::::::::::::::::::::::::::::::::::::V:E::E::::G:VI VNG1081 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::AI hla1958 MSDRSRSACISVAERNGPASTSIKNAFDGVTADPREYLNRHPQAVV::::::::::::A: HQ1873A :::::::::::::::::::::::::::::::::::::::::::::::S:::Q:::::::F HVO_1469 :::::::::::::::::::::::::::::::::::::::::::::::::::::A:::::F Hbo0080 :::::::::::::::::::::::::::::::::::::::::::::::::::::V:::::: consensus VDELAAAGVDAVCIAPGSRSTPLTVAFARHDDIEVFSHLDERSAAFFALGRARRTGEPTP #oth 23..135.1221133........12.2131223422.2.....1.1....1111..6111 NP2726A A::::TV:IETAVL:::::::::A::::Q:::::AV:L::::::::::::Y:K:::Q:A: rrnAC0838 :G::V:G::::::LS:::::::::::::E:P::::::::::::::::::::::::::::: Hut1505 :E:::::::EYA:L::::::::::S:::A:E:VDAV:L:::::::::::::G:Q::K::A Hmu1325 :E::V:N:I::::V::::::::::::V:::PEMR:Y:::::::::Y::::::::::T::: VNG1081 A::::::::H:::VC:::::::::::VDA:::LT:Y:::::::::::::::GK:::A::A hla1958 I:::V:::::::VAS:::::::::::A::T::LR:::Q:::::::Y::::::::::KV:: HQ1873A :S::::S:::T:::S::::::::::::D:::S::T::::::::::Y::::::::::SV:: HVO_1469 A::::RT:I:::::::::::::::E::D::::::T::::::::::Y:::::::::::V:: Hbo0080 :::::K::::::::T:::::::::E::D:::::H:::::::::S::::::::::::DV:: consensus LVCTSGTAAANYHPAVIEADQARVPLLVLTADRPPELRDSGANQTVDQEKLYGDAVRWYR #oth 221.....2..2...11..32211.112......1.141......2..22...1...513 NP2726A ::::::::L::F::::::::T::::MVL:::::::::A:::::::I::AD:::::::S:: rrnAC0838 :::::::::::::::::::N:SG::::L:::::::::I:::::::::::::::::::::: Hut1505 V:T:::::T::L::::M:::EG::::V::::::::::Q:::::::A::T::::S:::R:: Hmu1325 :I:::::::::F:::::::::S:::MVL::::::R::Q:::::::I:::::::::::Q:: VNG1081 VLT:::::T::L::::M::A:::I::V:::::::::::G::::::::::Q:::S:::Y:E hla1958 :I::::::::::::::M::SE::::::A:::::::::::::::::A:::::::::::F:K HQ1873A V::::::::::::::::::S:::::::::::::::::H::::::::::T:::::::::FH HVO_1469 I::::::::::F:::::::S:::::M:::::::::::::::::::::::::::::::::K Hbo0080 :::::::::::::::I:::A:S:::M::::::::::I::::::::I:::::::::::::K consensus DLPEPEATPRKLRSLRTTAARAVATATGTPPGPVHLNVPFRKPLEPTPV--------EGD #oth 222..1242.21.1..1121.1244211431......2112.....26211111111321 NP2726A T::::::AA:::::::::LC:::G:::::E::::::::::::::::LAAAEPPAGVPD:A rrnAC0838 :M:::::E:::V:M::::::::L:ES::SD:::::::CR:::::::::M::::::::PE: Hut1505 T::::APR::A:::::V:::::::D:::::::::::::::::::::VH:::::::::::: Hmu1325 S::::APE::R:::::::VC:::::::D::A::::::::VS::::::::::::::::::A VNG1081 ::::::V:A::::::::SVC:::GHT::PK::::::::::::::::VS:::::::::P:: hla1958 :::::APND:A:::::::V::::G::E:AD::::::::::K::::::R:::::::::LD: HQ1873A :IG:::P:A::::::::::::SIM:::D::A::::::F:::::::::::::::::::P:: HVO_1469 :M::::::D::::::::::::::SE:::VDA::::::F:::::::::Y:::::::::::: Hbo0080 ::A:::::::::::::::::::LTK:::::A:::::::::::::::VT:::::::::::: consensus VPDDLDEE-PLAARG----RDGP--FVETTTGTPELDDDTLRRLADALE-ADRGLIVAGP #oth 2.222354423255.1111.313212.6227.6341335424523543534411.1.2.. NP2726A :::GFAT:N:::::::::::::::::::VHS:CTDPSAT:VDE::T:V:A:AS::::C:: rrnAC0838 D:AGVPADWAGGDN:AKIG::::::::T:SE:VETP:EQ:V::VQ::::A:E:::::::: Hut1505 :::::A:RA:::VD::::::::::::::VSQ:::A:A:ND:DDVV::I:GS::::::::: Hmu1325 :::::P:RA::G:N:::::::::::M:R::R:DRT:SASD:ST:::RID:RE:::::::: VNG1081 ::PSF:DDH::::A::::::G:DTP::SVHD::T:PAGE:AAA::A:ATT:A:P:V:::: hla1958 ::A:::--::V:E::::::::::::Y:DV:P:S::PG::A::::GNE:MTT::::::::: HQ1873A I::::S:::--SIT::::::::A:::::S:::NRV::ENSVN:I:QS:S:TS:::::V:: HVO_1469 ::A:::S::--:LD::::::S:SRPY:K::A:A:::S::H::K:::D:A:V::::V:::: Hbo0080 :::::P:I:--::E::::::EDA::::G::::V::::::A::D::ER:S:TP:::V:::: consensus AD-PPGPDAEALAALAHATGFPVLADPLSGLRFGGHVR--DAPVCGGYDAYL-------- #oth 33172245311232113.1111121....13.1.21231123113.1..21.11111111 NP2726A T::R:A::::S:V:::D::::S:F::::::::::P::D:::::::::::::::::::::: rrnAC0838 :::-Q:LS:DS:ER::A::::::::::::D::::P::DRL:V:::::::G:::::::::: Hut1505 :S:Q:T:ARD::::::R::D::::::::::H:::-:GE:::V:I:::::S:::::::::: Hmu1325 SN:E:T:GRD:::E::D:::::::::::::H:::P::G:::R:I:::::S:::::::::: VNG1081 ::GGA:ITPD:A::::D:::A:IF::::::::::P::G::::::V::::GF::::::::: hla1958 ::::::L::::VT::S::::::I:::::::V:::::T:::V:::I:A:::::SAEVAGEA HQ1873A MT:I::V:P::V::F:::S:::::::::::I:Y::LT:::TT:II::::G:::::::::: HVO_1469 ::::::FN:::V::F::::::::VV:::::::::::T:::TTT:L::::::::::::::: Hbo0080 :::A::I:S::V::F:::::::I:::::::V:::::::::V:::I::::SF::::::::: consensus -DADV-D-WPDPDVVLRFGASPTSKPLRKYLADADARQFVVDPAGGWREAEFTATDLVVA #oth 14265544143.13.3.2.......4..21.243325.33..1113.2..2.2.11212. NP2726A :P:LE:-:-QT:E::I::::::::::::Q::R:::::::I::::::::::T::::::::: rrnAC0838 :GS:SV:Q:D:::::V::::::::::::H::R:::CQ::L:::::::S:::::::N:L:: Hut1505 :::CGEWG::E::T:V:::::::::I::H::R:SE:::::::S::E:P::::::S::L:: Hmu1325 :::GA:-::::::I:::::::::::T::HW:R::::A::::::::Q::::A::::::::: VNG1081 :A::::-:-:H:EF:::::::::::::::W::AS::::V:::::::::::::::::V:A: hla1958 G:::AS:S:N::E::::L:::::::R::::::ETG:D:YQ:::::R::::::A::::::: HQ1873A :TSELW:Q::::::::::::::::::::Q::ESTSPT:YL:::::E::::T:::::I::: HVO_1469 ::ER:TAD:A::E::V:I:::::::A::::::RT::::YL:::T:R::::::G:::::E: Hbo0080 ::EQ:TQS:::::I:F::::::::::::::::RV::E:L:::::A::::::::::::::: consensus DPTRLATRLSRRLAGG-GDSSWRERWEDAEAAYWDLVDREDD------------------ #oth 213313632153443314655134334411652343345565111111111111111111 NP2726A :E:::::AVADAVDR-:TPG:YAD:LAEL:PG::R::EG:EP:::::::::::::::::: rrnAC0838 N:DAT:DA:AGETL:::VAA::::QFIR::QTH::A:TETAS:::::::::::::::::: Hut1505 ::::::G:::D:I:T:::N:G::::F:R::SE::S:L::RTA:::::::::::::::::: Hmu1325 :::::::G:AE::DR-:SPTA:T::F:T:::R::::AE:AHG:::::::::::::::::: VNG1081 ::AAT:RAIAA:AD:-:TR:A:TDAVL:L::R::AA::DFQP:::::::::::::::::: hla1958 E:S::CA::::LV:::D::AD::AQ::::DRVAQEIHG::R::::::::::::::::::: HQ1873A :::Q:LWQ:::A:NTP::S:T::Q::IE:DK:HT:VLANT:SSAHQSLAATNSDSSTDDI HVO_1469 E:SV::W:::QLIRNR:P:E::NAL:T:::D:::::::D:T::::::::::::::::::: Hbo0080 ::S::MV::::L:::P::GPE::K:::N:D:THESVLETS:E:::::::::::::::::: consensus ---------------FFEGRVLADVAALAPDPATLFVSNSMPVRDLDRFGAPRTADLTVL #oth 11112222222225655..5312213432.112.2211....1..3...35.4433231. NP2726A :::::::::::::::-Q::AM:::AV::::::S:V:::::::::::::::::QA:S:S:: rrnAC0838 :::::::::::::ETYW::G::S::T::::::::::I:::::I::M::::G::D:::::: Hut1505 :::::::::::::DGS:::A::ST:::TV::TT::V:G::::::::::::Q::P:AVR:: Hmu1325 :::::::::::::EQ::::T:A:T::SAV:::::VM::::::::::::::R::A::V::: VNG1081 :::::::::::::AATL::EIA:T:::G::::::V:::::::I::F:::A:::G:::A:: hla1958 ::::GDIPADDEPVE:H::DA:RV::DAL::::::::::::::::::::VG:T:TSV:A: HQ1873A IENTDEEGSNESDRW:C:::I:S::MTA::::::I:::::::::::::::S:T:QNR::: HVO_1469 :::::::::::::::A:::::A::::D:::E:S::::::::::::::::AR:S:KSR::: Hbo0080 ::::::::::::::::C::::::::VE:::::::I::::::::::A:::CP:G:KN:::: consensus GNRGASGIDGIVSTALGAGS--ATTDPLVLVTGDLAYYHDMNGLLALGRCDVDATIVLVN #oth ....1.....13.11....1111142212322...121..2...1.24.33.2..1.22. NP2726A :::::::::::A:::::::F::G:D::::A::::::::::::::::VS:AG::::::CI: rrnAC0838 :::::::::::T::::::::::::S:::::::::::::::::::::::::A::::V::L: Hut1505 ::::V:::::VT:::::::::::AEG:::A:L:::SF::::::::::A:A::A:::::L: Hmu1325 :::::::::::T::G:::::::::D::::VL:::::::::::::::V:::N::::::::: VNG1081 ::::::::::V::S::::::::::A::V:GLV:::::F::S::::::E::G::::::::: hla1958 ::::V::::::::S::::::::::::D:T::V::::L:::T::::::D:::::::V::I: HQ1873A :::::::::::I::::::::AL:::EH:IAI:::::::::::::A::E::::T:::::I: HVO_1469 :::::::::::::S:::::::::A::H:T:L::::::::::::::::::LG::::::::: Hbo0080 ::::::::::::::::::::::::::D:T:::::::::::::::::I::S:::::::V:: consensus NDGGGIFHMLPIESFEPPFTDQFKTPHGLDFEPTADLYDLSFARVD-----------DRD #oth ....1...3....42313.353.2....11121321213231413311111111113554 NP2726A ::::::::V::::AH:-S:DKW:R:::::::::S:A:::IE:::T::::::::::::S:E rrnAC0838 :::::::::::::DH-:T:E:::R::::::::::EA::S:Q:E::A:::::::::::::R Hut1505 :::::::::::::D:N:::SEF:::::::::S:VE::::AE:V:A::::::::::::SLA Hmu1325 ::::::::E::::::::::::::R::::::::::GA::::EYD::E:::::::::::G:G VNG1081 ::::S::::::::Q:D::::G::::::::::A::::T:A:::::T::::::::::::TVG hla1958 ::::::::E::::::::E::ES::::::IE:::M:::HG:AYT:I:ARPDSVESAGNVA: HQ1873A ::::::::K:::::YD::::T::V::::::::::E:I::::::::R:::::::::GT::: HVO_1469 :::::::::::::EY::::::::::::::::AA:E::::::::S:::::::::::::-P: Hbo0080 :::::::::::::Q:D::::S:::::::::L::S::::G::::::E:::::::::GG:S: consensus GFRDAYAEAVGADGTQVIEVRTDAESSHRVRERLHERVREELA----- #oth 413522541453611221.14212161.26.33243315553843211 NP2726A :::SL:S::::SGE::::::Q:ESGHN:AD:TA:R:A:V:::GR:::: rrnAC0838 Q::ERF::S:QT:::::::::F::GD::A::DQ:T:Q:A:T::GD::: Hut1505 A:DSLFG:SLS:P:::I:::TL:::E:::I:DAI::D::A::Q::::: Hmu1325 ALA::V:SSA::S:::IV:C:F:G:R:::Y:D:V::::::S:-::::: VNG1081 E::A::RA:L:DA::H::::S::::A:::E::::AD::TGLSV::::: hla1958 DLA:::TG:RD:::SHL::::::::::::T:K::EAA:DRAVHGDEAE HQ1873A ::HT:FT::TTTT:SH::::V::S::::::::Q::D::IKRILDN::: HVO_1469 D:::::::S:AT:::D:::::::::::::::::IA::AI:R:SESD:: Hbo0080 :::K::ET:TQSE::H::::V::::T::TA::S:RR::VD::TD::::