Home |  Text search
[R] (PelA) COG1537 Predicted RNA-binding proteins
9 genomes BUD0500 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1506

rrnAC0965

HVO_2880

Hbo2646

Hmu1747

Hut0579

hla1222

NP4344A

HQ1802A

Pairwise sequence scores
Consensus score2674 VNG1506 HQ1802A hla1222 HVO_2880 Hbo2646 NP4344A rrnAC0965 Hmu1747 Hut0579
2051VNG1506 2694 1654 1846 1791 1808 1888 1861 1919 1809
2066HQ1802A 1654 2643 1839 1905 2082 1811 1767 1818 1725
2180hla1222 1846 1839 2801 2066 2113 1868 1873 1905 1886
2196HVO_2880 1791 1905 2066 2647 2136 1904 1922 1899 1885
2281Hbo2646 1808 2082 2113 2136 2654 1964 1940 1955 1846
2157NP4344A 1888 1811 1868 1904 1964 2642 1999 2069 1938
2175rrnAC0965 1861 1767 1873 1922 1940 1999 2656 2116 1910
2265Hmu1747 1919 1818 1905 1899 1955 2069 2116 2673 2133
2105Hut0579 1809 1725 1886 1885 1846 1938 1910 2133 2679

379 symbols
consensus       --------------------MRISDRGRGEEGRERITLVPENLDDLWHLSYVLEPGDLVA
#oth            11111111111111111111.115213431112.1211...21......21.1.1..2.3
VNG1506         :::::::::::::::::::::QLK::HTV:G::::::::::S:::::::A:::::::F::
HQ1802A         :::::::::::::::::::::::PS:::::::K:QW::::::V:::::::H::::::R:G
hla1222         MSTSTTEKTRIDTRPGRRSG:::::::Y:::::::L::::::V::::::AH::::::::E
HVO_2880        ::::::::::::::::::::::::S:::::::::::::::::V::::::::::::::::S
Hbo2646         ::::::::::::::::::::::::S:::::::::::::::::V:::::::H:::S::::S
NP4344A         :::::::::::::::::::::::V::ESA:GR:::::::::T:::::::T::::::::::
rrnAC0965       :::::::::::::::::::::Q:QSQETTA::A:::EV:::T::::::::::I::::::S
Hmu1747         :::::::::::::::::::::::A::QQV:G::::L:::::T:::::::T::I::::R::
Hut0579         :::::::::::::::::::::::AE:E:V:G::::L:::::S:::::::T::I::::R::

consensus       GDTTRRIQRNDDQMRDTGGEREHMWVTIEVDDVEFARFANRLRVGGEIVDCSREDQLGHH
#oth            ...1.....1.121..1..1..1242323.52...11.11....1.3.32.....1.241
VNG1506         :::H::::::::::::::::::::F:::D:G::::HK:S:::::S:T:E:::::::::L:
HQ1802A         :::::::::::ENL:::::Q:::LV:::::A:::::::::::::::::IS:::::E:::Y
hla1222         :::::::::::::::::::Q:::LF::LQ::E::::::::::::S:V::G:::::::NA:
HVO_2880        :::::::::D:E:::::::::::LN:::::::::::::::::::::V::S::::::::::
Hbo2646         :::::::::D:::::::::Q::::H:::S:S:::::::::::::::::::::::::::::
NP4344A         :::::::::D::K:::::::::P::IR:D:NN::::K:::::::::D:::::::::::F:
rrnAC0965       ::::::::::::NL::K:::::P::IQ:::T:::::K:::::::::::::::::::::F:
Hmu1747         :::::::::D:::L::K:::::P::IAV::T:::::K:::::::::T::::::::::DF:
Hut0579         :::::::::::::::::::::::I:AALD::::::::::D::::S:V:G:::::::::Q:

consensus       HTLNVEEHDEITVEKHFKPDQLDRIEEAVEAAENPDVAIATVEEGEAHIHTVAQYGTEER
#oth            ..2..1213.2311.4222..53.212.21.1121..111.1..12.11.1.2...1112
VNG1506         :::::A:RE:LE::::WQ::::N:LN:::::TDQ::::::::::::::::V:Q:::VD:Q
HQ1802A         ::::::S::::I:T:K:A:::RK:::A:E:::::A:::V::I:::::::::::::::::Q
hla1222         ::I::::::::::::::::::TE:L:::T::::::::::::::::A:YV:::Q::::::Y
HVO_2880        :::::::RA:::I::Q::A::I::::T:EQ:::::::::::::::A:Y:::::::::::Y
Hbo2646         ::::::::::V:I:::::::::::::::EQ:::::::V::::::::::::::::::::::
NP4344A         ::F:::::::L::::VWQV:::E:L::::::::Q:::::::::::Q::::::::::V:::
rrnAC0965       ::::::::T:L:::::L::::A::L::::::T::::::::::::::::V:::::::::::
Hmu1747         ::F::::::::E:::VW::::I::V:::T::TDQ::::::::::::::V:::::::::S:
Hut0579         ::I:::Q:::LD:::TW::::M:::::::::TDV:::::V::::AQ:YV:::E:::::::

consensus       ASITATTGKGE-YARPREELFAELADALSRMDVDAIILAGPGFTKQDALDYIQDEYPDLA
#oth            212131....111212.4...311342.313211.2.........1..331132151233
VNG1506         G:F::::::::QND:G:D:::GT:::::A::QA:::::::::::::::::H:TE:::::Q
HQ1802A         F:R::::::::::SQ::T:::::F:A::::::::::::::::::::::EE:::SNN:EII
hla1222         ::F:KP::::D::S::::::::::GE::AHL:A::V::::::::::::::::TE::R:::
HVO_2880        ::::KP:::::::::::S:::D::GS:::HLE:::::::::::::N::M::FE:NF:AV:
Hbo2646         F:F::P:::::::::::S::::::GK::::::::::::::::::::::R:::AENHR:VV
NP4344A         ::::G::::::::::S:D:::E:::AI:R:L:AE:::::::::::::::EH:E:NA:EA:
rrnAC0965       :T::S::::::::::::K:::D:::SV:K:Q::::Y::::::::::::::HF:::I::I:
Hmu1747         ::::S:::::D:::::::::::::S:V:R::::::Y:::::::::::::K::::::::::
Hut0579         :::AGP:::::::::::::::G::T:V:K:T:A::::::::::::::::A::E::A:AV:

consensus       DKI-TTVDTSAVGDRGVHEVLKRGAVDDVQEQTRIAEEAELIDELMERIATGAKAAYGPD
#oth            251123...121.1............121.32..112.131..1.12412313122..21
VNG1506         ET:::M:::::::G::::::::::::E::::E::::::S::::::TTQM::DG:::::I:
HQ1802A         ::L::I:::A:::::::::::::::::E::T::::SA::::::::::G::::E:I:::I:
hla1222         :R:::::::::A:::::::::::::::E::KE:::SK::T:::D:TAE::Q::::T:::E
HVO_2880        ET:V:::::AG:::::::::::::::::::K::::::::N:::::::N:S::::::::VE
Hbo2646         :::::V::::S::::::::::::::::E::T::::SK::D:::D:::G:S::E:V:::IE
NP4344A         E:::QV:::AS::::::::::::::::RI:TE::VSK::::::::::::GE:E:::::V:
rrnAC0965       EQ:::V::::::::::::::::::::E:::Q::::::::DY:::::A::GS:SEV::::E
Hmu1747         AE::::::::::::::::::::::::E::::R::::::::::::::::::::::V:::::
Hut0579         :S::R:::::::::::::::::::::E::::E:::::::T::::::::::::::VS::::

consensus       EVAEAAEFGAIETLLVLDERLREERAGEGDW-DVDVNDIIETVEQQGGDVTVFSHEFDPG
#oth            3.11.111..113..21.22..41.42422.122..1422431.11..2.2.1.4..2..
VNG1506         ::QK:V::::V:D::I::::::L::::::::V::::::LVR:::::::S::::::::A::
HQ1802A         :::K::::::VDD:::V:DQ:::::RDS::::ST::DTVLQN::::::S:::L:G:::::
hla1222         D:::::::::::::::V:D:::T::Q::::::SI:::EV::S::::::::V:::S::A::
HVO_2880        Q:::::::::V:H::L::S:::A::Q:D::::::::::::DS:::K::E:::::A::Q::
Hbo2646         ::::::::::V::::::::::::::Q:A:E:::::::EV:Q:::R:::::A:::S:::::
NP4344A         :::::::::::::::I::::::::::::::::A::::::::N::::::E:V:::::::::
rrnAC0965       :::K::DY::::::::::::::L::::::::::I::DQ::::T::K::::::::A::A::
Hmu1747         A:::::::::::E::::::::::::GE:SE::::::DE:VT:T::K::::::::::::::
Hut0579         A::::::Y::::H::::::P::RA:DEGDN:::I::DRV::RT:::::E:::::R:::::

consensus       QQLRNLGGIAALLRYRLQ-
#oth            21.3....11.2.....31
VNG1506         E::::::::G:V:::::D:
HQ1802A         :R:::::::::::::::::
hla1222         E::S:::::::I:::::::
HVO_2880        E::K:::::::V:::::::
Hbo2646         R::K:::::::I:::::::
NP4344A         :::A:::::::::::::S:
rrnAC0965       :::S::::V::::::::D:
Hmu1747         ::::::::V::::::::::
Hut0579         :::S:::::::::::::ES