|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1549 | VNG0633 | HQ1636A | hla2601 | HVO_0977 | Hbo0464 | NP2290A | Hut1397 | rrnAC1446 | Hmu1951 |
1073 | VNG0633 | 1530 | 864 | 1023 | 945 | 929 | 989 | 945 | 891 | 921 |
1095 | HQ1636A | 864 | 1632 | 1051 | 1043 | 1117 | 1003 | 963 | 1010 | 960 |
1270 | hla2601 | 1023 | 1051 | 1530 | 1141 | 1211 | 1036 | 1084 | 1084 | 1092 |
1200 | HVO_0977 | 945 | 1043 | 1141 | 1520 | 1182 | 1073 | 1031 | 1051 | 1018 |
1274 | Hbo0464 | 929 | 1117 | 1211 | 1182 | 1583 | 1059 | 1077 | 1092 | 1082 |
1238 | NP2290A | 989 | 1003 | 1036 | 1073 | 1059 | 1539 | 1131 | 1071 | 1137 |
1255 | Hut1397 | 945 | 963 | 1084 | 1031 | 1077 | 1131 | 1576 | 1244 | 1252 |
1209 | rrnAC1446 | 891 | 1010 | 1084 | 1051 | 1092 | 1071 | 1244 | 1649 | 1347 |
1235 | Hmu1951 | 921 | 960 | 1092 | 1018 | 1082 | 1137 | 1252 | 1347 | 1763 |
240 symbols consensus ---------------MTTMTDSE-VQSLIDRLEAEAAADRPPEETPDVGIIMGSDSDLDT #oth 111111111111112324554444232.1.31221.23.33423..11.11.......21 VNG0633 ::::::::::::::::::VS:--:---:::LF:T:::::H::D::::::V:::::::::V HQ1636A ::::::::::::::MPAHTPNEPTI:A:L:::HTQ:DT:LTTA::::::::::::::::: hla2601 ::::::::::::::::::VQ:--:---::::::::::::AD::T::::::::::::::P: HVO_0977 ::::::::::::::::::ER:--:---:::E:H:Q:D:::D::T:::::::::::::::V Hbo0464 :::::::::::::::::AD::DVT:E::::::R:::D::AD::T:::::::::::::::V NP2290A :::::::::::::::---::R::E:AA:::LF::::ER::SDA::::I::V::::::::: Hut1397 :::::::::::::::----MT::S::::::Q::::::M:::V:A::EI:::::::::::V rrnAC1446 :::::::::::::::----MPADN::::::Q:HE::EM:::NDL::::::::::::::P: Hmu1951 VTGDGSPTLTAQRDGE:I:::::S::::::Q:RE::EM:::N:A::::::::::::::A: consensus MAG-------AHEAL-DELGFEEQTDFDDAPEARFTFETFVVSAHRTPELMYAYGETAAD #oth .5.2322111.221.223...4.2.11322.231111.12.1......31111.13..31 VNG0633 ::::::::::::D:::TD:::T:L::Y::P:TG-Y:::SW::::::::T::D::AR:::A HQ1636A :V:::::::::::::::K:::D:::E:MTS:D::::Y::Y::::::::QVL::::::::: hla2601 :E:::::::::YD::::::::A:::::::::D::::Y:SY:::::::::::::::::::A HVO_0977 :S:::::::::::::::T:::G::::::AP::E::SY::Y::::::::D::::::D::R: Hbo0464 :C:::::::::::::::::::::::::T:::D::::Y::Y::::::::D::::::Q::M: NP2290A :Y:::::::::Y::::T::::::V::Y::P::S:::::::::::::::::::::::::R: Hut1397 :::SESGRPG:FDV:TE:::::::::YET:::::::::::::::::::::::T:A:::E: rrnAC1446 :::GQGKRPG:YA::A::::::::::YT::::S::::::::C::::::D:::::A::::: Hmu1951 :::GKGKRPG:YA::AE::::A:::::T::::::::::S:::::::::::::::A:::EA consensus RGLDVIIAGAGGKSADLPNMTASIAYPLPVIGVPVQEKSVDSVIGMPTGAPIVAVDAGKS #oth ..2111.................1...1..1....1...12......1...11....... VNG0633 :::::::::::::::::::::::L:::I::V:::::::::P:::::::::::T::::::: HQ1636A ::I::::::::::::::::::::::::I:::::::::::::::::::::::::::::::: hla2601 ::::IV:::::::::::::::::L:::I:::::::::::::::::::::::::::::::: HVO_0977 ::VE:::::::::::::::::::::::I::V::::::::::::::::::::::::::::: Hbo0464 ::::::::::::::::::::::::::::::V::::::::::::::::::::::::::::: NP2290A ::::::::::::::::::::::::::::::V::::H::::S::::::::::::::::::: Hut1397 :::::::::::::::::::::::::::::::::::::::LP::::::Q:::::::::::: rrnAC1446 ::I::::::::::::::::::::::::::::::::::::::::::::Q:::MT::::::: Hmu1951 :::::V:::::::::::::::::::::::::::::::::::::::::Q::::T::::::: consensus FNAALSAVQILAREHPELEDRLEAYHEALQGGVAEVSRDLHDLGTDGFRESR-------- #oth 2..1.2.1.4.114213143..5311341473.143.321.24.3442245453321111 VNG0633 Y::G:A:A:F::TDD:T:A:::RDLQA:R:E:::D::AR::SQ:::SL:SPQN::::::: HQ1636A H::::::A:::S:::DV:KT:::E::T::ITD::AD:FRM::A:VNT::ANNDESGTSNE hla2601 :::G:::A:V:::::DAI:E::IE:::E:K:::::::A::::::I::::DRNEP:::::: HVO_0977 :::::::::A:S:GT:::::::VD:::D:VSD:::T:AA:::::VA:::::::::::::: Hbo0464 :::::::::M:::::DV:::::LE:::S:T::::RD::::::M:LTEYV:::KE:::::: NP2290A :::::::::M:::G:::::A::::::DD::DN:GA::KR::EQ:::R::::::::::::: Hut1397 :::::::::::::Q::::QE::L::::G::Q::G:::::::ER::P:::DT-:::::::: rrnAC1446 :::::::A:::::Q:D::R:::VS:::G::AD:G:A:::::E:::P::KREYWDE::::: Hmu1951 :::::T:::V:S:K::::RE::Q:::DE::NE:GT::::::E:::PE:KSTYWDGE::::