| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4459 | Hut1889 | NP5312A | hla2659 | rrnAC1872 | Hmu0834 | VNG0284 | HQ1173A | HVO_0768 | Hbo0763 |
| 2747 | Hut1889 | 3707 | 2509 | 2459 | 2734 | 2571 | 2467 | 2446 | 2451 | 2515 |
| 3648 | NP5312A | 2509 | 4458 | 3413 | 3425 | 3442 | 3447 | 3305 | 3351 | 3355 |
| 3721 | hla2659 | 2459 | 3413 | 4825 | 3415 | 3374 | 3387 | 3354 | 3431 | 3540 |
| 3836 | rrnAC1872 | 2734 | 3425 | 3415 | 4446 | 3773 | 3300 | 3358 | 3492 | 3528 |
| 3752 | Hmu0834 | 2571 | 3442 | 3374 | 3773 | 4432 | 3348 | 3386 | 3435 | 3469 |
| 3716 | VNG0284 | 2467 | 3447 | 3387 | 3300 | 3348 | 4360 | 3372 | 3457 | 3477 |
| 3764 | HQ1173A | 2446 | 3305 | 3354 | 3358 | 3386 | 3372 | 4508 | 3517 | 3690 |
| 3905 | HVO_0768 | 2451 | 3351 | 3431 | 3492 | 3435 | 3457 | 3517 | 4386 | 3826 |
| 3920 | Hbo0763 | 2515 | 3355 | 3540 | 3528 | 3469 | 3477 | 3690 | 3826 | 4474 |
644 symbols consensus ------------MTDPADLDVTIVDGYVDEPAHFGVPPYISTYPRFTAGALVDAGVPEEN #oth 1111111111234431431311211111111111.111111.11.2211.3111112453 Hut1889 ::::::::::::------------------VGRS:SASATK:RG:ANPN:TI-------- NP5312A :::::::::::::Q::::::::::::::::::::::::::::::::A:::A:::::DPDS hla2659 MTDSPASGRGSLPP::N::S:::::::::::::::::::::::::Y:::::::::::::S rrnAC1872 ::::::::::::::::ET:::::::::::::::::::::::::::YA::::::::::R:Q Hmu0834 :::::::::::MT::::::S:::::::::::::::::::::::::Y:::::::::::RRQ VNG0284 :::::::::::::IA:E:::::L::::::::::::::::::::::Y::::::::::DPA: HQ1173A ::::::::::MTHIH:SN:S::L::::::::::::::::::::::::::::::::::HDQ HVO_0768 :::::::::::::::::::T::::::::::::::::::::::::::::::V:::::::S: Hbo0763 :::::::::::::::::::T::L::::::::::::::::::::::::::::::::::::: consensus ITYHTIDELREDRAKWRDVADADLMVYVGGMTVPGKYVGGTPAEPDEVRELAWTADGTSV #oth 2211111211324443511241113313111111111111111111111222.2141234 Hut1889 ----------------------------------------------------::------ NP5312A :::::::::::S:RL:E:::::::F::::::::::::::::::::::::K:::::E:V:: hla2659 :::::::::::::G:HA:::N::::::::::::::::::::::::::::::G:::::VTL rrnAC1872 ::::::::::::N:V::::EA::::::::::::::::::::::::::::::::::N:::I Hmu0834 :::::::A::::S:R:Q::EQ:::L::::::::::::::::::::::::K:::::G:::M VNG0284 V:::::::::G:T::FN:::::::F::::::::::::::::::::::::::::L:::::: HQ1173A :::::::A::D::GR:::::::::LI:L::::::::::::::::::::::I::::::V:M HVO_0768 VV:::::::::::Q:::::::::::I:I:::::::::::::::::::::::::V:E::AL Hbo0763 V:::::::::D::Q::A::::::::L:I:::::::::::::::::::::::::::::V:: consensus MGGPVRFGVGEENAGAQEMERDNLDYDFLAMADVEAAAYDLVDSGLEGFNDRYRDNEELD #oth 21112111112212123223152111.11.31.1...11..133.....32.1.344.33 Hut1889 -------------------------F::::G::I:::VF:::EN:::::DP:::TMD:SS NP5312A :::::::::::A:E::T:TK:Q::::::::L::I:::V:::LHG:::::E:::::::::: hla2659 L:::::::::::::::::T:::D:::::V::G::::::::::RE:::::GN:M:::A:I: rrnAC1872 :::::::::::A:E::S:TA::D::F:::::::::::VF:::E::::::::::::I::ET Hmu0834 :::::::::::A:E::S:TA::D::F:::::::::::::::::N:::::E::::GVP:ET VNG0284 :::::::::::::::::::::SD::F:::::::I:::::::::N:::::E::::::Q:IN HQ1173A ::::::::::D::::::::::Q:::::Y::::::::::::::E:::::::::::STD::: HVO_0768 ::::I:::::D::::G:D:::K::::::V:KG:I:::::::::::::::GN:M::::::: Hbo0763 ::::I::::::::::::::::R:::::Y::::::::::::::::::::::N::::::::: consensus RWARKGAFVVEQHPNHPDYLICEMETSRGCAYRCSFCTEPMYGDPAFRTADSVVDEVDAL #oth ...34...1.2...21.11..1.2..1...1.........1..213..3121.14..24. Hut1889 ::::E:::I::::::::::::::I::G:::::::::::::L:::AS::EP:A::S::::: NP5312A ::::::::I:::::D::::::::L::::::P::::::::::::::T:::P::::S::GG: hla2659 :::E::::::K:::::::::::::::::::::::::::::L::S::::E:Q::::::::: rrnAC1872 ::::A:::::::::::::::::::::::::P::::::::::::N:D::PPE::::::::: Hmu0834 ::::Q::::::::::::::::A:L::::::P::::::::::::::D::PPE::::::::: VNG0284 :::A:::::::::::Y:E:::::::::::::::::::::::::::S::S::A::T::GE: HQ1173A :::S::::I:V::::Y:E:::::I:::::::::::::::::::::S:::::::IR::ES: HVO_0768 :::AM:::::::::S:::H:::::::::::::::::::::L::N::::::::::K::EN: Hbo0763 :::A:::::::::::::::::::::::::::::::::::::::N::::::E:::R::EN: consensus SDRGVRHFRLGRQADILAFGGDGEAPNPDALRRLYGGIREVAPDLETLHLDNMNPITIVD #oth 211.131..1........1....11.......2..2...3.1.2.3......1..1.114 Hut1889 ::H::TN:::::::::::Y:::::::::::::E::R:::K:::G:::::::::::::V:K NP5312A A:H:::::::::::::::Y:::::::::::::E::::::D:V:::G:::::::::V::T: hla2659 :::::K::::::::::::::::::::::::::E::S:::::::::R:::::::::V::T: rrnAC1872 :::::K::::::::::::Y::::::::::::::::::::D:::::::::::::::::V:K Hmu0834 :::::AN:::::::::::Y::::KS:::::::D::::::S:::::::::::::::::V:E VNG0284 YAH:A:::::::::::::::::::::::::::D::::::::::E:G:::::::::V:::: HQ1173A A::::A:::I:::::::::::::::::::::::::S:::D:::::Q:::::::::::::N HVO_0768 Y:::A::::::::::::::::::::::::::::::::::::::::G::::::V::::::G Hbo0763 :A::AK:::::::::::::::::::::::::::::::::::::::Q:::::::::::V:K consensus WPEKSREGIRIIAEHNTPGDTAAFGLESADPVVQEENNLNVTADECFEAVRIVNEVAGWR #oth 1.111.12111.121..1.......1.....3.224.3.1.1.11111..11...21.2. Hut1889 ::::A::::::::::::::::::::V:::::A::SD:::::::::AL::::::::EG:F: NP5312A Y:::::::::V::::::::::::::::::::::R:K:::L:S:E::L::::::::AG::: hla2659 Y::A:::A::V::A:::::::::::::::::::::Q:::L:::E::L::::V:::EG::: rrnAC1872 ::::A::::::::::::::::::::::::::N:MSD::::::::Q:::::K::::::::: Hmu0834 ::::A:::::V::::::::::::::::::::L:::::::::S:E:::Q::::::::::V: VNG0284 Y:::::DA::V::::::::::::::::::::L:::::H:L:S:E::L:::::::::G::: HQ1173A ::DA:::CLD::STY:::::::::::::::::::DQ:Q:::::::::::::::::::::: HVO_0768 :::::::AL::::::::A::::::::::::::::::::::::::::::::K::::::::: Hbo0763 ::::A::C:::::::::::::::::::::::::::A:T::::::::::::K::::E:::: consensus PG-------------------EDPAD---------APSHGDDAANRLPKLLPGINLVHGL #oth ..1111111111111111111242331111111111.251531331.........11... Hut1889 ::ARSEATGSGRASGDSREPGG:RDN:::::::::::TF:::::RG:::::::::F:::: NP5312A ::::::::::::::::::::::A:GS:::::::::G::VDAN:-D::::::::::::::: hla2659 :::::::::::::::::::::DT:ETTPGADDRVMG::T:P::SP::::::::::::::: rrnAC1872 :::::::::::::::::::::G:KDT:::::::::::NF:::::R::::::::::::::: Hmu0834 ::::::::::::::::::::::E:GS:::::::::G::T:S::P:::::::::::::::: VNG0284 ::::::::::::::::::::::S:::::::::::::::W:EGSPD:::::::::::L::: HQ1173A ::::::::::::::::::::::::::::::::::::::Y:IE:PD:::::::::::L::: HVO_0768 :::::::::::::::::::::D:::::::::::::::T::S:::::::::::::::L::: Hbo0763 ::::::::::::::::::::::T:DN:::::::::::T::P::S::::::::::::L::: consensus KGERAETFEHNKRFLQRVYDEGLMLRRINIRQVMAFEGTEMADTGADIAQDHKQQFKQYK #oth 3..14.111...2..1322.1.112..1........3..1.211.122.42..32.12.. Hut1889 :::T:::::::::::::IL:::::I::V::::::::P::::DE:::E::::::R::QA:: NP5312A E:::::::::::Q:::D:::::::::::::::::::::::::E::::::H:::::::T:: hla2659 A:::P::Y::::E:::T:::::::::::::::::::A:::::E:::::::E::D::QA:: rrnAC1872 :::TR::::::::::::::::::::::V:::::::::::D::::::E::K::::L::::: Hmu0834 ::::R:S:::::::::::::::Y::::::::::::::::D::::::E::K::::L::::: VNG0284 T:::::::::::Q::HSLL:::::V::::::::::::::::::::V:L::N:::L::::: HQ1173A T:::T:::A::::::H::F:A::L::::::::::::::::::E::::V:IE::K:::::: HVO_0768 ::::E:::::::::::::::::::V:::::::::::D::D:S:::::::R::::L::T:: Hbo0763 ::::E::::::::::H::::A:::V::::::::::::::::::E::N::KE::KR:QA:: consensus QEVRETIDNPMLQRVAPPGTVLPDVHLEYHQDGKTFGRQLGTYPLLVGIPGERELGKTID #oth 33...11.21..3.11.2..1.21.2....2..1.........2...12....1..431. Hut1889 R:::::::::::::::::::I:E::::::::::::::::::::::::::::::P:::::: NP5312A :A:::E:::::::::::::::::N:Y::::E::R:::::::::A:::AL:::::::R:V: hla2659 R:::::V:::::D::V:::::::::::::::::::::::::::A:::AV:::::::TA:: rrnAC1872 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::SVV: Hmu0834 ::::::::::::K::::V:::::N:T::::::::::::::::::::::::::::::R::: VNG0284 TD:::::::A:::::V::::::K::T:::::::::::::::::S:::A::::::::Q::: HQ1173A :::::E::Q:::R:LV:A:::::::Y::::R::R:::::::::::::::::::P:::M:: HVO_0768 T::::E::R:::R::::A:::::N:::::::::R:::::::::::::::::::::::::: Hbo0763 KQ:::E::Q:::R::::A:::::N::::::::::::::::::::::::::::::::Q::: consensus VAVTDHGYRSVTGVPYPLDLNAASMDELTAIPGIGRSTAGDIVVNRPYDSAPDV--ADAD #oth 1.11......111..1.1.4.3...1..221...1222..12313..1333432356232 Hut1889 ::I::::::::::::H::::::::::::Q:L::::SQ:::N:I:G:::::T::I::EGV: NP5312A :::::::::::S:::::::I::::::::R:L::::KQR::NLF:D::HETV:NL:DDGP: hla2659 ::I::::::::::::::I:V::::::::::::::N::K::::::G:::G:LDE:DSGV:: rrnAC1872 I::::::::::::::::::::S:::N:::E:::::::::::V::::::E:VG:I::DV:S Hmu0834 ::I::::::::::::::::P::::::::R:::::::::::::::D:::::VEEI::-:DA VNG0284 ::I::::::::::::H:::::D:::::::::::::S::::::L:A::H::::P::::::: HQ1173A :::V::::::I:A::::::P:::::::::::::::SR::::::I:::::GLA::PVS:V: HVO_0768 :::V:::::::::::::::F:E::::::::::::::::::::::::::AD:A:::GV::: Hbo0763 :::V:::::::::::H:::P:E:::::::S:::::KR::::::I::::A::DE:SA::V: consensus LSKFTQAGRVD------------------------------RAD #oth 34413546565431111111111111111111111111111321 Hut1889 FEA::TI::ESPS::::::::::::::::::::::::::::--- NP5312A :GT:CVT:GSG::::::::::::::::::::::::::::::S:: hla2659 ::R:AV:DD::VAIPGRDRSGSGPGPAARSLLDRRDGSSVG:G: rrnAC1872 IER:ATTRSQE::::::::::::::::::::::::::::::G:: Hmu0834 :TQ:VA:E:RQ::::::::::::::::::::::::::::::G:: VNG0284 :A::::-----::::::::::::::::::::::::::::::--- HQ1173A ::T::H:SGY:EP::::::::::::::::::::::::::::::: HVO_0768 VT:YV:-----::::::::::::::::::::::::::::::--- Hbo0763 F::::DSYP:EH::::::::::::::::::::::::::::::::