|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2237 | VNG1069 | NP3722A | rrnAC0305 | Hmu0368 | Hut0465 | hla2267 | HQ2679A | HVO_1532 | Hbo0013 |
1219 | VNG1069 | 2076 | 899 | 861 | 784 | 993 | 891 | 963 | 953 | 937 |
1260 | NP3722A | 899 | 2354 | 853 | 895 | 1066 | 985 | 967 | 1004 | 1015 |
1432 | rrnAC0305 | 861 | 853 | 2431 | 1494 | 888 | 1034 | 1082 | 1116 | 1090 |
1441 | Hmu0368 | 784 | 895 | 1494 | 2364 | 881 | 1092 | 1113 | 1117 | 1052 |
1320 | Hut0465 | 993 | 1066 | 888 | 881 | 2181 | 952 | 1035 | 1110 | 1039 |
1409 | hla2267 | 891 | 985 | 1034 | 1092 | 952 | 2231 | 1115 | 1236 | 1190 |
1536 | HQ2679A | 963 | 967 | 1082 | 1113 | 1035 | 1115 | 2361 | 1299 | 1424 |
1620 | HVO_1532 | 953 | 1004 | 1116 | 1117 | 1110 | 1236 | 1299 | 2313 | 1468 |
1590 | Hbo0013 | 937 | 1015 | 1090 | 1052 | 1039 | 1190 | 1424 | 1468 | 2702 |
385 symbols consensus -------------------------DSD-P--------LRSWLVIYLKGVCMGAADAVPG #oth 111111111111111123234354543362222223445441364232132..1..31.. VNG1069 :::::::::::::::::::::::::---:-::::::::-------------::::::::: NP3722A :::::::::::::::::::::::::M:AT:::::::TGA:A::AV:::::::::::T::: rrnAC0305 :::::::::::::::::MTTHPDRDP::L:TIRGSVPP::A::RTF:I:L:::S::G::: Hmu0368 ::::::::::::::::MTTSSSEAT:::FS::::SVPS::R::KTFVI:L:::S:::T:: Hut0465 :::::::::::::::::::::::::---:-::::::::-----:::::::A:::::S::: hla2267 :::::::::::::::::::::::::---:-:::::MTG::E:ASL:::::A::S:::::: HQ2679A ::::::::::::::::::::::MVN:::ES::::::SLMP::::V:I::I:::::::::: HVO_1532 ::::::::::::::::::::MSRNS:G:A:::::::::RL:::L:::::::::::::::: Hbo0013 VAPNCDTSQTVVRSETWEYPGDKRLRMSK:SDDARGQLNS::V::FI::I:::::::::: consensus VSGGTIALITGIYERLIAAVTAITPGRIRRLLRAVRPVGRG----DAVAALREIDVPFLL #oth 1....1.214.1....12.21322142254434445374352332525342543.23..3 VNG1069 :::::::::V::::::VS:LAGLSVADVATVVAL:PRL:SRDGRATVAET::AL:::::A NP3722A :::::::VVL:::::::::L:SLD:KAATT:REIHTAN::A::::RLA:E:VRM:::::: rrnAC0305 :::::::::A:V:::::::I::V:::::VQFF::LA::DG:VDVRG:FSE:L:::IW::: Hmu0368 I::::V:::M:::::::::I:::::E:A::F:::LT::DG:VSLRR:::V:E:V::W::: Hut0465 :::::::F:::::::::S:IATLD:RAA:H:::IH:TS::Q::::AL:RR:LAM:::::I hla2267 :::::::::V::::::::::::VD:A::::::AGA::ANIP::::::R::FH:::GA::F HQ2679A :::::::::V:::::::T::::V::R:::AI:S:PH:HY:E::::S:L::::T::IW::I HVO_1532 :::::::::::::::::S::::::::::K:A:GV:V:GR:A:::::::::M::V::G::: Hbo0013 :::::::::::::::::::::::S::::MAV:GG:V:ER::::::::I:::KKM::G::I consensus ALGAGVATAVVTVARVVHIALNQYPALTFGFFFGLIAASAVVLYREVSVDTPGRIGAAVA #oth 1.22.142133414232232445312311111....1..131.45714432332331143 VNG1069 V:::::VS::::::S::DV:YT:::G:::A:::::::::V:::IG::A::::::::::LG NP3722A V:::::LS:AA:::TAMNV:VT::::P:YA:::::::::::::::Y:DAG::::LL::GV rrnAC0305 ::V::::::::I:T:I::::SQET:::L::::::::::::I::L:SLT::S:FQA::G:V Hmu0368 ::VG::G::::I:::I::V:SEET:V:LY:AL::::G::::I:L:AL:IE:ATHAV::AS Hut0465 V::S::M::L:L:S::M:A:::GAR::::A::::::::::::::EN::FG:I:::::::: hla2267 V:L::IG::::A:LSG:DYL:ETR:VA:Y:::::::::::A::FGG::L::SR:KA::I: HQ2679A :::::ILS:II:IT:I::AGIVS:::I:::::::::::::W::RQPLTI::::::V::AG HVO_1532 :::::I:::I:::M::L:::::DA:VP:Y:::::::::::::::AQ::L:G:RQ:AV::: Hbo0013 :::::I:VS:TSIT::M::GI:T::V::::::::::::::W::FT::E:N::::::::I: consensus GFVLAFVVSG-QAAGALGHGLPVLFVAGAVAVSAMILPGISGSLLLLILGQYEYMSGALS #oth ..42..421236423453732244322.21312..1...1..112.23..1.23223324 VNG1069 ::A:::A::AQAT::T:PD::A:MV:T::::IC::V:::V::::I::T::K::T:TS:V: NP3722A :::F::::TDPSL::DMPATA:M::::::I:::::V:::V::AF:::V::::::V::IPR rrnAC0305 ::LV::Y:::VSN:ATN:G::ALV:F::M:G:::::::::::::::I:::::TR::T::: Hmu0368 :::::::L:::P:SPLGTE::L:V:LG:::S:::::::::::::::VV:::::RL::::T Hut0465 ::G:::L:::VT:GATQS:A::I:::T::IMIT:::::::::AFM::L::::DHLTTV:K hla2267 ::S:::LA:::Y:ST::SSSP::::::::::::::::::V::::::VV:::::::::TV: HQ2679A ::LV::I:::::::T:::QS:::TIL::::::::::::::::::::V::::::::T:T:: HVO_1532 ::G::::A:::GSG::F::S::AIA:::GI:::::::::V::::I::::::::::NA::N Hbo0013 :::F:::A:::::GTS::T::::TVL:::I::::::::::::::::IL:::::::::::K consensus RFVDGLLAVVTG-GPTEAVVETGTVVVTFILGALVGLFTIARAVRWALARYRAATLAFLV #oth 5111223323411334564334344222154.123.1112122123..343151.22... VNG1069 TA::AVA:----::ALGDA:APVATLAA:S::::A:VL:F::V:Q::::E:::::VT::: NP3722A :::E:::S----::GG:TFI:AAVAFGV:LG::::::::V:Y:::A::K:::Q:::V::: rrnAC0305 E:::A:I:L::::::::D:TT:AVP:::::::G:::::::::V::R::DYN:R::::::: Hmu0368 T::::::::L:::R:AAGL:DA::::::::::G:::::::S:LI:R::D:N:G::::::: Hut0465 ::::S::GL:::DASFGL::DL::T::VVGI::M:::LSF::VI:::::N::::::T::: hla2267 ::::::A::AL::NG:D:LA::LPP::::L::G:::V::::H::KY:::HA::::::::: HQ2679A M:::ASV::L::::SFT:II:::::::A:VS::VF:::S::H::::::E::YE::F:::: HVO_1532 A:I:S::D:AG::A:LSV:::P:::::::MV::V::::S::HV:::::EH::R::::::: Hbo0013 S::::::GL:V:::S:TP:T:S:LI::A:M:::VI::::::H::::::EHH:KP:::::: consensus ALIVGALRAPVVEV---L-ADA--------GAAWTTETIAAFAAAAAVGAAAVLVLDRYA #oth 1.21....1.24254542253611111111444223646353232142.13311111322 VNG1069 ::MA::::::A:RI:::-::::::::::::T::::VGSV:PLV::GV::::::::::ATT NP3722A S:M:::::L::H:MAVGVETRPFDMAVLGIDTVP:PRSG:IV:V:::L:V:::M:::::T rrnAC0305 ::V::::::::::::::-:-QD::::::::KVGFS:DVLI::V::G:::::FL::::W:: Hmu0368 ::V:::::::IT:LS::-:TRE::::::::AVT:::::::V:::V::A::VV:::::W:: Hut0465 S:M:::::L::E:::::-:L:N::::::::T:::GPT:TGLTVL::G:::G::::::H:T hla2267 S:::::::::I:::SIR:::ES:::::::::ET:SAAA-PR::L::V::::L:::::::S HQ2679A ::::::::::::R:GTR:SS:::::::::::TG::PS:::L:IT::L::VFV::L:E:A: HVO_1532 S::::::::::::STAA::V:::::::::::RS::::LY::::V::V::::V::LV:::T Hbo0013 :::::::::::AKTGEN:::EL:::::::::RV::::AY:I:::M:I:::G:::LV:::: consensus GDLDY-------------------- #oth 4533534321111111111111111 VNG1069 D:::::::::::::::::::::::: NP3722A E::Q::::::::::::::::::::: rrnAC0305 V:::LDKV::::::::::::::::: Hmu0368 V:::FEAV::::::::::::::::: Hut0465 :S:S::::::::::::::::::::: hla2267 AGIE::::::::::::::::::::: HQ2679A :IG:VDMRI:::::::::::::::: HVO_1532 DVIES:::::::::::::::::::: Hbo0013 :LAEINDDTIDDETGDETTPSGGLD