|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2340 | hla1191 | HQ3332A | HVO_2315 | Hbo2003 | NP4550A | VNG1779 | Hut0485 | rrnAC1716 | Hmu2323 |
1793 | hla1191 | 2597 | 1630 | 1568 | 1514 | 1420 | 1538 | 1471 | 1440 | 1472 |
1723 | HQ3332A | 1630 | 2404 | 1658 | 1606 | 1382 | 1469 | 1511 | 1362 | 1458 |
1781 | HVO_2315 | 1568 | 1658 | 2378 | 1689 | 1427 | 1456 | 1558 | 1416 | 1455 |
1760 | Hbo2003 | 1514 | 1606 | 1689 | 2255 | 1414 | 1424 | 1519 | 1403 | 1396 |
1666 | NP4550A | 1420 | 1382 | 1427 | 1414 | 2316 | 1513 | 1522 | 1380 | 1484 |
1755 | VNG1779 | 1538 | 1469 | 1456 | 1424 | 1513 | 2310 | 1513 | 1441 | 1557 |
1823 | Hut0485 | 1471 | 1511 | 1558 | 1519 | 1522 | 1513 | 2380 | 1585 | 1642 |
1760 | rrnAC1716 | 1440 | 1362 | 1416 | 1403 | 1380 | 1441 | 1585 | 2362 | 1643 |
1765 | Hmu2323 | 1472 | 1458 | 1455 | 1396 | 1484 | 1557 | 1642 | 1643 | 2321 |
344 symbols consensus ----MLSRGRRLAQRAYERLLQREIDGGPTHVAVIQDGNRRYAREQGDDAPDGHREGAQT #oth 11221473545666431314.6112433.3.1.1.1.......134.54342.132..4. hla1191 ::::::N:L:V:TE:::R:H:H:::EDV:::::I:::::::::::R::N::::::A::A: HQ3332A ::MS:FR:V:GVI::::V:A:::Q:TE::::::I:::::::::::::N::HE:::::::: HVO_2315 :::::FGWV::GFR:::::V:D::::D::::::I::::::::::KN::::::::KA:::: Hbo2003 ::::---------------M:R::LG:::A:::I::::::::::RR::E:::::K:::K: NP4550A ::::-MAP:AGYLS:L:::::E::VSAA:S:::::::::::::ET::EA:TA:::A::E: VNG1779 :::::RT:LWDA:SAV:::::T:::::A:A:::::::::::::::H:::PT::YQS::R: Hut0485 :::::R:WI:KQ:TSV:::::K:::::::::I::::::::::::KE:QETSA::::::E: rrnAC1716 MYTT:::::K::GYA:::::::W:LS:T:D:::::M:::::::EK::TKKQE::K::::: Hmu2323 ::::::Q:A:D:::T::::::E::LSDA:S:::::::::::::::::A:TTA:YT:::E: consensus TERVLEWCDELGVEELTLYAFSTENFDRPPEEREPLFDLIEDKLREFADADRVHEAGVRI #oth 1.31.4..311113.1...1......2.15312331...215..13...3111.243.21 hla1191 :::::D::AD:::A::::::::::::E::D::L::::::L:T:::D:::::::::Q:::V HQ3332A ::::::::E:::I:::::::::::::T::DA:LQ:::::::S::Y:::::E:T::NS::: HVO_2315 ::D::T::E:::I::::::T:::::::::EH::G::::::::::Y::::SE:::DRE:AV Hbo2003 A:Q::H::E:F::::::::T:::::::::Q::L::::::::E::Y:::::E::::::::: NP4550A ::::::::AD::::::::::::::::E:::D:::A:::::AE:::::::HEE::DRE::: VNG1779 ::::::::SD::::::::::::::::E:::DQQQH::::L:S::::::::::::ADR::: Hut0485 ::AL::::::::I::::::::::::::::ADQ:AV:::::::::YD:::S:::::::::: rrnAC1716 ::AL:N::::::IR:V:::T::::::::D:::::HI:::V:Q:::T::::::::::::C: Hmu2323 ::AL:H:::::A:D:V:::T:::::::::K:QQ:H::::::R:::A:::T::::DNE::: consensus RAIGETDRLPERVRDAIDYAESRTAGYDGFTLNIALAYGGRAELLGAARDVARAVDAGDL #oth 21..2232..3..12.23...31.241.415..1.......3...31223213213412. hla1191 ::::DV::::::::::V::::R:::DN:R::::V:::::::T:::D::TAI::D:::::: HQ3332A G:::DI::::Q::QS:VE::::Q::A::D:R::::::::::S:::R:::S::HD::::E: HVO_2315 :::::VHL::D:::::VE:::::::D:::::::::::::::::::::::::C:::ER::: Hbo2003 CT::::::::P:::E::E::::::R:::::C::::::::::::::::V:::::D:TS:T: NP4550A ::::Q:H:::D:::E:AA:::R::E:::ALR::::::::::::::DV:::I:AEAA:::: VNG1779 ::::D:G:::Q::::::T:::::::::::::::V:::::::D:::T:::G::D::A:::: Hut0485 ::::::H:::::::E::::::AQ:R:::Q:H::::::::::::::::VK:L:AD::R::: rrnAC1716 ::::::EM:::::::::::::G:::Q::QLN:::::::::::::::::::::A::ENET: Hmu2323 ::::::E::::::::::::::::::C::RLQ::V:::::::::::::T::I:::::D:E: consensus DPADVDVETIESRLYEGPTRDVDLIIRTGGDERTSNFLPWHANGNEAAVYFCAPYWPEFS #oth 1.4412132115..4541111....1.1..1...........1.1...21..1......1 hla1191 ::T::::::V:E:::DR:V::::::V:::::::::::::::::::::::::::::::::: HQ3332A ::ST::A::V:C::SRHT:::::::V:::::::::::::::::::::::::::::::::: HVO_2315 S:DE:::SAVDR::SRK:V::::::::P:::::::::::::::::::::::::::::::: Hbo2003 S:D::T::E:D:::CQH:::::::::::::A::::::::::::::::::::::::::::: NP4550A ::EA:T:DE:::::TA:::QA:::::::::::::::::::::::::::::::T::::::: VNG1779 ::::I:AQA:::::HTS:V:::::::::::::::::::::::::S::::F::T::::::: Hut0485 :::TI::::V:N::::::::::::::::::::::::::::::::::::A::::::::::R rrnAC1716 ::T::SA::::E:::::::::::::V::::::::::::::::::::::TF::T::::::R Hmu2323 ::ES::AD:::G:::::::::::::V::::::::::::::::K::::::::::::::::R consensus KVDFLRAIRTYESREESWRRTRAERALALVRAVAERELAEARRVLGRFRDALP------- #oth 2111..11...13.14..222.12.121...13344.354.2423311124121111111 hla1191 E:E::::::::Q:::::::QA:::::V::::::::V:I:::HA:A::L::R::LDADALA HQ3332A :I::::GL:::::::::::QS:TK::V:::::::KT:IED::Q:A::L:EQ:S::::::: HVO_2315 ::::::G::::::::Q::Q:::T:::VT:::::::V::ED::T:A::L:EQ::::::::: Hbo2003 ::::::GL:::::::K::Q:::T:::V::::S:::T::::::A:TA:L:EK::::::::: NP4550A RI::::::::::A::A::E::::K::A:::::FGD:::::::::V:Q::GSV:::::::: VNG1779 :::L::::::::::AA:::Q:::K::::::::LG-S:VG::::::D::KG:::::::::: Hut0485 :I::::::::::H::D:::Q:::R:::T:::::SD:::HH:KS::R::::S::::::::: rrnAC1716 :::::::::::QN::D:::T:::::S::::::IEQS::PT:K:M:::::::::::::::: Hmu2323 :I::::::::::H:A::::::::R:::T::::LG-P:ASQ:::I::::::::T::::::: consensus ---SGEAEEVEAELDR--D---------------------ESAD #oth 1114634232433644432312222111111111111111451. hla1191 AALP:DD:DAVEDRSEDGSPPETATENAGQTPTGERDAEP:::: HQ3332A :::PTG:R::S:::S:QH:SPTDSV:::::::::::::::D::: HVO_2315 ::::SG:D::S:::AKRT:::::::::::::::::::::::T:: Hbo2003 ::::AG::::A:::E:QG:T:::::::::::::::::::::A:: NP4550A :::E::LD:::DPS::D:-:::::::::::::::::::::P::: VNG1779 :::-DPP:D::::T--::-:::::::::::::::::::::Q::: Hut0485 ::::R:L:::DVSI:TEH::::::::::::::::::::::PGG: rrnAC1716 ::::T:R:QLDE:Y--::-:::::::::::::::::::::DL:: Hmu2323 :::RQ:R:A::DDV:-::-:::::::::::::::::::::VV::