|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2035 | VNG1114 | NP4460A | hla2331 | HQ1605A | HVO_0914 | Hbo0627 | rrnAC1409 | Hut0935 | Hmu1918 |
1484 | VNG1114 | 2094 | 1273 | 1291 | 1374 | 1391 | 1383 | 1253 | 1264 | 1279 |
1580 | NP4460A | 1273 | 2019 | 1428 | 1410 | 1451 | 1459 | 1410 | 1451 | 1474 |
1688 | hla2331 | 1291 | 1428 | 2064 | 1580 | 1639 | 1648 | 1364 | 1424 | 1452 |
1741 | HQ1605A | 1374 | 1410 | 1580 | 2070 | 1671 | 1786 | 1391 | 1461 | 1409 |
1810 | HVO_0914 | 1391 | 1451 | 1639 | 1671 | 2090 | 1806 | 1475 | 1510 | 1535 |
1804 | Hbo0627 | 1383 | 1459 | 1648 | 1786 | 1806 | 2068 | 1464 | 1497 | 1498 |
1580 | rrnAC1409 | 1253 | 1410 | 1364 | 1391 | 1475 | 1464 | 2036 | 1540 | 1445 |
1648 | Hut0935 | 1264 | 1451 | 1424 | 1461 | 1510 | 1497 | 1540 | 2015 | 1558 |
1629 | Hmu1918 | 1279 | 1474 | 1452 | 1409 | 1535 | 1498 | 1445 | 1558 | 1997 |
268 symbols consensus -MDGTLDHVMIRVEDLDESLDWYTTHLDYEEKGRWEADTFTNVYLGPEDMHDEGALLELT #oth 124331..1.2..1..11..1..31122.1.12....11....21..2142121.4..1. VNG1114 MTAF::::::M::G:::A:::::GD:MG:V:HA:::::::::::I::::PA:DA:::::: NP4460A ::::I:::T::::::::A::E::::::N:::::::::E:::::::::::AG:AA:R:::: hla2331 :::::F::::::::::E::::::Q:::N::::::::::::::::::::E::ED::T:::: HQ1605A ::A:IF::::::::::EA::E::Q:::::::::::::::::::::::TE::::::M::I: HVO_0914 ::S:::::::::::::E::::::::::G:::::::::::::::::::::L:E:::V:::: Hbo0627 ::S:V:::::L::::::::::::K::::::::::::::::::::::::E::E:::M:::: rrnAC1409 :-MWS:::T:M::::::A:::::Q:YF:::::::::::S::::F:::::V:::::::::: Hut0935 ::::::::::M:::::E:::::::::F:::::S::::E:::::H:::A:V:::::T:::: Hmu1918 ::GL::::T::::::::::::::::::G:::::::::E:::::F:::::V:ED::::::: consensus YNHDDRSYEMGDAWGHIAVRV--DDVEEAYDQLMDEGVEDYRDPESCGGRYAFVKDPDGH #oth ...1222.22..11......112331431.42.134..2...1.211112....1..... VNG1114 ::::TAD:DN:::F::::::::::::SD::EE:LAG::A::::::::::S:::::::::: NP4460A ::::G:::T::::::::::::::P:::A:::E::QS::::::P:AENP:-::::T::::: hla2331 :::G:NT::I:::::::::::PE:ALQ:S:::::E:::D:::::::::N::::::::::: HQ1605A ::::::::::::G::::::::PNGKL:A::Q::L:D:::::::::::::::::::::::: HVO_0914 :::G:NT::::::::::::::PE:EL:SS:R::::::::::::::::::::::::::::: Hbo0627 :::::::::::::::::::::PE:EL:SS:Q::::::::::::::::::::::::::::: rrnAC1409 ::::G:::T:::::::::::C:::::YD:::D:::A::::::::D::::S::::T::::: Hut0935 ::::G:::T::::::::::::::E:::::::E::::::::::P::ENP:-:::::::::: Hmu1918 ::::G:T::::::::::::::::G::T:::HE::::::::::P::ENP:-:::::::::: consensus EIEIVER--DHGAKWSLDHTMIRVEDADEALGFWTRKFEY-EHTGRWEADSFANYFMKPE #oth .1.1.311113.331.1....2..1.13211.213.312111341.2.312..1..2213 VNG1114 :::L:AG:::A:QR::I::::V::A::TQH::::::V:G::::::::::::::::::::P NP4460A :V::::::::Y:T::::::::L::::VNA:::Y:I:T:::::P:::::::::::::VS:Q hla2331 :::::K::::Y::T::I:::::::::::::::Y:::::::A:AR:::::::::::::A:: HQ1605A :V:::Q:DP:E:TM::I:::::::::::::::::::::::::::::::S::::::::::: HVO_0914 :V:::K::::::::::::::::::::::::::::::::G:::::::::S:T::::::::: Hbo0627 :V:::K:::N::S:::::::::::::::::::::::::::::::::::S:T::::::::: rrnAC1409 ::::::::::::T::::::::::::::EQ:I:WYV::LN:::LFR:E:F:D::L::L::: Hut0935 :::::::::::::R::I::::::::::EQ:I:WY::AL:::DLVR:S:HS:::L:::::A Hmu1918 :::::::::::::RY::::::L::::::A:I:WYA::LGF::PA::::::T::::::ADP consensus DAADEAMAVELTYNYDGRSYEMGDAWGHLAVRADD--LEDAWETLMEREAEDYRDPESCD #oth 2.241..42.1.....1.3.22..1...211231211.433.32.23.2141....1..1 VNG1114 A:S:A:::::::::::D:T:TF::G:::::::::S:::Q:D:A::L:::TA:::::A::: NP4460A ::PA:::DI:::::::::::T:::::::V:::CA::::QS:::::Q::::P::::::::: hla2331 ::PK:::KL:I:::::::E:T:::G::::C::V:::::DE::DQ::V:::L::::::::: HQ1605A G:S:A:::::::::::::A:DL:::::::C::::::::::Y:A:::::D:T::::::::E HVO_0914 G::E:::::::::::::::::::::::::::G::::::H:Y::::::::::::::::::: Hbo0627 G::E::::::::::::::T:D::::::::C::::::::GEY::::L::D::E:::::::: rrnAC1409 ::P::::S:::::::::::::L:::::::::QT:::::HG::::::G:H::::::::::: Hut0935 G::E:::S::::::::::::::::::::::::T:EGT:::T:G:::Q:D::::::::::: Hmu1918 :::Q:::T::::::::::T:::::::::I:A::::::::::::S::V::::E:::::::: consensus YNYAFTKDPDGHEIEILEAE-------- #oth 431...122..1.1.2255333222111 VNG1114 M::::::T:::::::V:NP:SSPMDRSA NP4460A NR:::::A:::::::::PT::::::::: hla2331 H:::::::Q::::::L:VR::::::::: HQ1605A :Q::::T:Q::::::::::T:::::::: HVO_0914 DMF::::::::::::VIP:DFESPE::: Hbo0627 NR::::::Q:::::::::PTDN:::::: rrnAC1409 DR:::::::::R::::VTN-:::::::: Hut0935 ::::::::::::::::VKR-:::::::: Hmu1918 ::::::::A::::V::VTS-::::::::