| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2919 | hla0197 | VNG2100 | HQ1348A | HVO_0464 | Hbo1046 | NP1076A | Hut2228 | rrnAC2508 | Hmu3028 |
| 2197 | hla0197 | 2910 | 1937 | 1861 | 1986 | 2021 | 2009 | 1809 | 1983 | 1950 |
| 2291 | VNG2100 | 1937 | 3685 | 1839 | 2115 | 2072 | 2010 | 1937 | 2080 | 2080 |
| 2108 | HQ1348A | 1861 | 1839 | 2776 | 2009 | 2082 | 1943 | 1920 | 1929 | 1940 |
| 2379 | HVO_0464 | 1986 | 2115 | 2009 | 2928 | 2315 | 2020 | 2014 | 2072 | 2131 |
| 2377 | Hbo1046 | 2021 | 2072 | 2082 | 2315 | 2942 | 2066 | 1959 | 2143 | 2102 |
| 2406 | NP1076A | 2009 | 2010 | 1943 | 2020 | 2066 | 2909 | 2045 | 2158 | 2173 |
| 2287 | Hut2228 | 1809 | 1937 | 1920 | 2014 | 1959 | 2045 | 2921 | 2202 | 2221 |
| 2520 | rrnAC2508 | 1983 | 2080 | 1929 | 2072 | 2143 | 2158 | 2202 | 2918 | 2591 |
| 2497 | Hmu3028 | 1950 | 2080 | 1940 | 2131 | 2102 | 2173 | 2221 | 2591 | 2945 |
495 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 hla0197 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2100 MLSRCPVLRRPIPHGTIDHLIRSRDCGTGTRVPRLTKPPLAVSLSLRFDRFYVRGRPTDS HQ1348A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0464 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1046 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1076A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2228 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2508 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu3028 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -------------------------MLSLADVRAARDRVSETARHTPLEYSHTFSEMTGA #oth 11111111111111111111111111243412441232254212311122.4111421.. hla0197 ::::::::::::::::::::::::::I::S:::E::E::GDV:::::::R:R:::::S:: VNG2100 CHTLRSRVLRRSPPTVKPGPRIPAS::::S:I:D::E::::::::::::::::::DL::: HQ1348A :::::::::::::::::::::::::----------------------MQR:P:::S:::: HVO_0464 :::::::::::::::::::::::::::T:D::::::E::EAV::R::::::::::::::: Hbo1046 ::::::::::::::::::::::::::I::::IE:::::IDGV:K::::D:::::T::::: NP1076A :::::::::::::::::::::::::::E::::T:::P::A::::Q::::H:T:::KR::: Hut2228 :::::::::::::::::::::::::::TRE::LV:::::::::::::::R:YSL:A:::: rrnAC2508 ::::::::::::::::::::::::::::FE::L::Q:T::::::::::D::::::A:::: Hmu3028 :::::::::::::::::::::::::::AFD::L::::::A::::::::D::::::S:::: consensus DVHLKLENFQRTGSFKIRGATNRIATLSAAEREAGVVTASAGNHAQGVALAASRAGVDSK #oth 2121.1.34....1......1.1122.224222....1..............213..112 hla0197 :::::::::::::A::::::M:::::::ES::::::::::::::::::::::D:::::AT VNG2100 ::RP:::C::::::::::::::::R::::DQQD:::::::::::::::::::::S::::: HQ1348A :I::::::T::::A:::::::::::::::D:QA:::::::::::::::::::::::::AT HVO_0464 E:Y:::::S:::::::::::::::T:::DE:KA::::::::::::::::::::::::N:: Hbo1046 S:::::::H:::::::::::M:::T:::E::K::::::::::::::::::::T::::::: NP1076A ::R:::::::::::::::::::KV:L:E::D::::::A:::::::::::::::K::::AV Hut2228 :::::Y:TV::::::::::::::::::TDEQQA::::A::::::::::::::T:M::::T rrnAC2508 :I:::::L:::::::::::::::::S::D:::::::::::::::::::::::T:I::::: Hmu3028 :::::::L::::::::::::::::::::EG::::::::::::::::::::::T:I::::T consensus IVMPERAPVSKVKATRSYGGDVVLHGRDYDAAQARAHEIEREEGRTYVHAFDDEYVMAGQ #oth 1...15..11.13..22..1311.3.5...2.133..11133121.1.1....251.... hla0197 V:::RF::::::::::G::AS:R:E:V:::E:::Y:::L::K:S:::::::::PV::::: VNG2100 V::::S::I::I:::K:::AE:::::A:::D:::H:::L:AA:::::::::::::I:::: HQ1348A :::::Q:::::IE::ER::::T::Q:T:::E:::Y::QLAE:S:Q::::::::KA::::: HVO_0464 :::::Y::I::::::ER:::::::Y:N:::E::TK:::::ES:::::::::::::::::: Hbo1046 V::::H::I:::::::R::AET::Y:A:::E::Q::::::D::N:::::::::::::::: NP1076A :::::H::I::IN::::::AE:R:::I:::::AE::::::::::::F::::::PA::::: Hut2228 :::::::::A::::::::::::::::::::::AE:::::AEA::::::P:::::R::::: rrnAC2508 ::::::::::::::::::::N:::::::::::AEH:::L:::::::::::::::K::::: Hmu3028 ::::::::::::Q::E::::N:::::::::::AQK:::::::S:::::::::::M::::: consensus GTIGLEIAEDCPDVDTVVVPIGGGGLISGIATALKEQLDDVRVIGVQAEGASSAAESLEK #oth ..1....3311.211....11......1.111.21244412..1..1.11.11235..53 hla0197 :::::::VD::::L:::::::::::::::V:V:I::::P::::V:::::::A::G:::KR VNG2100 ::L:::::A:::T::::::::::::::::V:::::GE:::::::::::::::TV:R::D: HQ1348A :::::::I::::::E::::::::::::A:::::VTAHNP:I::::::::::A::RK::AS HVO_0464 :::::::::::::L::::::::::::::::S::I:::YP:A::::::::Q:::::D::N: Hbo1046 :::::::VD:::::E:::::::::::::::S::V::::S:::::::E::::::V:T::Q: NP1076A :::::::V:Q::::E::::::::::::A:V:::V:::-T:A::V:::::::A:::D:::: Hut2228 ::L:::::T::::::::::SV::::::A:V:::::AWN:::::::::::::A:LPQ:::A rrnAC2508 :::::::Y::L:G::::::::::::::::::::::GKDERI::::::::::::V:::::: Hmu3028 :::::::Y::L:G::::::::::::::::::::::G:D::::::::::D::::V::::K: consensus GEIQERDSVDTIADGIATRRVGDRTFEVIQERVDEVVTVSDDEIAVALTTLLERSKTLVE #oth .3343314.3.......1.41.23113.1532..1....3.41..311131...2...1. hla0197 ::VY:I:::::::::::::SI:EQ:L::MS:Y:::::::D:R:::L:::L:::::::::: VNG2100 :QP:AV:H:::::::::V:Q::AQ::P::::H:::::::::::::T::VL::::G::::: HQ1348A :S:HKLET:N::::::::::I:::P:A::DD:::D::::T:::::::V:YI::::::::: HVO_0464 :S::TI:E:::::::::V::I::KP::::R:::::::::::E:::::::Y:::::::::: Hbo1046 :SVH:L:::N:::::::::::::KP::::EKY:::::::::E::::T::Y:::::::::: NP1076A ::VV:::A:::::::::::K::::::D::A:::::::::::::::H:::A:::::::::: Hut2228 :::V::EA:E:::::::::K::ELP:::::N::::::::P:SA::::V::::::T::::: rrnAC2508 :HRI:::::E:::::::::T::EQ:::::SD::::::::::S::::::::::::::::A: Hmu3028 :HRI:::::Q:::::::::TI::::::::E:::::::::T:P::::::::::::::::A: consensus GAGAVALAALLEEKFDYEDDETIVPALCGGNIDLNTLTTVIMRGLVETGRYLKIRTVLKD #oth .1..112..22342.11341.11.12.1.....1.4.11.24...123..1211212.2. hla0197 :::::::::V:S:A:E::N:::::A::::::::::R:G:::R::::QM::::::TID::: VNG2100 ::::T::::V::D::E:A:G:::::::::::::::L:::::V::::DQ:::V:::::::: HQ1348A ::::::M::V:ADA:::SN::::::::::::::M:R::::LI::::::::::R:::::E: HVO_0464 ::::::::::VFQ:::::EG:VV::::::::::M::::::V:::::::::::::::E::: Hbo1046 :::::::::::F::::FTK::V:::::::::::M:Q::::V::::::::::::V:::::: NP1076A :::::P:::I::RR:::A:::::::::::::::::V:::::T:::::R::F:R:K::::: Hut2228 :G:::PV:::::GA:E::A::::::V:S:::::::V:::::::::I::::::R:::::E: rrnAC2508 :::::::::VM:::::F:::::::::::::::::::::N:::::::::::::::::::Q: Hmu3028 :::::P::::::G::::::::::::T::::::::::::N::::::::::::C::::::E: consensus RPGALEELVEILAREQANIYAIEHDRTSRDIAMNAAEVELDLETRGHDHVAELLDALEDA #oth 3..2.331343323433.1.113...1113122231211111.11121.23412321324 hla0197 :::E::RVSS:V::TG::V::VH:::::::V:V::::L::E:::DDAE:A:DIV::::AD VNG2100 S::S:ND:LATA:E:R::::::Q::::N:::::::T::::::::::PE::DR::TRIQ:E HQ1348A Y::::::::A:::DY:::::::Q::::::TVE::E:D::I:::::::::IDTI:S::RES HVO_0464 :::S::Q:I::I:A:K:::::VR::::::K::L::T:::I:::M::P:::ES::EE:R:: Hbo1046 Q::::HD:LT:I:E::::::::R::::::E:G::ETD:::::::::::::ET::S::REK NP1076A :::::Q:::GL:VDHRT:::::::::A:K:::::::::::::::::::::V::::::::: Hut2228 ::::::::::VIS::RG:::::::::A::::::DDTV:D::I::::P:::ES:::::::S rrnAC2508 ::::::::::V:S:::V:::G:::::::::V::SS::::::::::::::::::I:::T:E Hmu3028 :::S::::::V:SAA:V:V:G:::::::::::::D:::::::::::P::::::::R:::: consensus GYEVEVLV------- #oth .15.2..31111111 hla0197 ::V::::S::::::: VNG2100 :FD:T::NGPQIVSE HQ1348A ::T:::::::::::: HVO_0464 ::D::::D::::::: Hbo1046 ::R:D:::::::::: NP1076A ::A:::::::::::: Hut2228 ::::::::::::::: rrnAC2508 ::::D:::::::::: Hmu3028 :F:::::::::::::