| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1766 | NP5300A | HQ1406A | Hmu0512 | rrnAC1935 | Hut0157 | VNG1583 | hla0298 | HVO_0592 | Hbo0929 |
| 1066 | NP5300A | 1744 | 704 | 860 | 865 | 812 | 743 | 852 | 818 | 786 |
| 1090 | HQ1406A | 704 | 2562 | 720 | 766 | 843 | 820 | 879 | 1019 | 994 |
| 1088 | Hmu0512 | 860 | 720 | 1832 | 1061 | 833 | 789 | 974 | 840 | 801 |
| 1193 | rrnAC1935 | 865 | 766 | 1061 | 1807 | 808 | 909 | 992 | 915 | 918 |
| 1172 | Hut0157 | 812 | 843 | 833 | 808 | 1880 | 978 | 981 | 883 | 941 |
| 1188 | VNG1583 | 743 | 820 | 789 | 909 | 978 | 1746 | 938 | 929 | 933 |
| 1254 | hla0298 | 852 | 879 | 974 | 992 | 981 | 938 | 1863 | 990 | 995 |
| 1251 | HVO_0592 | 818 | 1019 | 840 | 915 | 883 | 929 | 990 | 1869 | 1171 |
| 1251 | Hbo0929 | 786 | 994 | 801 | 918 | 941 | 933 | 995 | 1171 | 1864 |
343 symbols consensus ------------------------------MFETTVRDGVLRLRRPGTRWLSTGWNGGYS #oth 111111111111111111111111112344311333222113343322...11142..54 NP5300A ::::::::::::::::::::::::::::::::DFERTSDR:TV:E:::::::N:FD:::T HQ1406A MTEENTESDTTSDVTDCTDHNISSENDDMTF:DL::::::C::Y::D:::::::Y:::V: Hmu0512 :::::::::::::::::::::::::::::::L:ARI::::CQC:SD:S:::G::PA:::R rrnAC1935 :::::::::::::::::::::::::::MRW::::::::S:CQI::E:A:::::A:D:::R Hut0157 :::::::::::::::::::::::::::MSRH::::R:G:::::E:SD:::::::::::FC VNG1583 :::::::::::::::::::::::::::::::::::LH::::E:AA::A::::::::::DT hla0298 :::::::::::::::::::::::::::::::::AA:::::::::::E:::::::::::RL HVO_0592 ::::::::::::::::::::::::::::::::::AR::::C::A::::::::::YA::D: Hbo0929 ::::::::::::::::::::::::::MLTPV:DA::::D::Q:S::E:::::::HA::E: consensus RADAAYNVTVPEGWDRTDLDAYVAERLAAAGF---------------------------- #oth 212212231..31162223431233.2451111111111111111111111111111111 NP5300A V::::H:L:::D:FG:::::::A::::GEPPA:::::::::::::::::::::::::::: HQ1406A :G:V::LLS::H::TE:AVS::::::C:T:::EYISTFTDGRGRSLTDTQTETPHNTTHA Hmu0512 ::::V::::::::F:::::SS::T::RRR::::::::::::::::::::::::::::::: rrnAC1935 T:::V::::::::FE:::::::R::::SG::::::::::::::::::::::::::::::: Hut0157 ::G::::C:::A::NPD:IR:D:TQ::DD::::::::::::::::::::::::::::::: VNG1583 :::R::SI:::DD:APDSTHE::TD::::::::::::::::::::::::::::::::::: hla0298 ::::::::S::::F:::::G::RD::::R::::::::::::::::::::::::::::::: HVO_0592 :::::F:I::::::PE:::::::ER::S:::::::::::::::::::::::::::::::: Hbo0929 :GPV::::S::::::EM:V:G::ER::D:::::::::::::::::::::::::::::::: consensus ------------REDGPTLLTGVDQEHARRARLGPVEVVATAGLSNPAALPM-----D-- #oth 1111111111343652.3.1...534..1311411.4152.1.1....3..311111254 NP5300A ::::::::::::---::::::::N:Q:::GG:::::VA:V::::::::T::::::::-:: HQ1406A GTDDTIWMNAET:TYA:A::::::LQ:::::::D::::IV:::V::::T:::SETIN:NQ Hmu0512 ::::::::::::EI:::G::::::VT:::C:TV:::T:L::V:::::::::L::::::ST rrnAC1935 ::::::::::::-AV::::::::HM::::C::S:S:S:L::::::::::::::::::SAA Hut0157 :::::::::::D:G:::V:::::::R:::G::::::T:FG:V::::::T::V::::::PA VNG1583 ::::::::::AP:D:A:V:::::A:::::I::C:::A:A::::::::::::::::::-:: hla0298 ::::::::::KSE::P:::F:::SMV::YG::::S:VAY::V::::::M:::::::::PT HVO_0592 ::::::::::::D:R::::::::G::::::::F::::::::::V::::E::I::::::DD Hbo0929 ::::::::::::D:K::::::::SMR:::::::::::::::::V:::::::V:::::-:: consensus ----------ADSAAGTAADDGDDP--RP-----GTVNLVVGTTRALDDGALANLVAVAA #oth 5413232223324563345555433333221111....222112.4.4312213.1.222 NP5300A ::::::::::-AAS:DDGRT::A:REW:::::::::::I::::R:P:S::G::G:L:T:V HQ1406A STENAMTDTEP:TKID:SGELD:SQINKSDRDDF::::IIL::::S:TP:::S:::::VS Hmu0512 ::::::::::--:RE:RGSA:A::A:W::::::::::::::::D::::::T::E:L:TCV rrnAC1935 ET::::::::::GSD:::SNPA:S:DW::::::::::::I::VD::::E::::T:L:T:V Hut0157 QK:::::::P::TR:A:G:ET:GP:::G:::::::::::F:::::S:TEAGM:::::IV: VNG1583 ::::::::::-:PDG::LP:AKRA:::-::::::::::::AA:::::::A::S::::::: hla0298 GV:TGATDDAG::EP:A::ST:EP::R::::::::::::::::::R:A:::A:::::::: HVO_0592 PREWGDASDAP:A:::DDR::R:::::-V:::::::::VF:::::S:EP::::::::::: Hbo0929 ::::::::::::::HS::HSRT:::::-:A::::::::VF:::::D:AA::::::::::: consensus EAKAATLLAQAGFPGTTSDAVVVACDPGGEPARFSGSATEVGAAARACVRDALRASLASR #oth ..11...2453131...1..232133242333612....31.2.3.1...1.23.1241. NP5300A :::T:::S:V::CT:::::::A:G:PS:DT:EP:A:::::::::V:::::E::L:::::: HQ1406A :::::::MT:T::T:::::::LI:S::T:NMK:::::::A::N:::V::::::C:A:::: Hmu0512 :::::::SRLV:V::::::::L:GAATD:D::D:A::::T::S:G:::::::V:::FRA: rrnAC1935 ::::::::DA:SV:::::::AI:G:V:SA:R:S:A:::::I:::T:V:::::I:::::A: Hut0157 ::RT::::EL:::T::::::I::::::::::::YT::::P::S:::::::E::T::YR:: VNG1583 :::::::::T::::::::::::::::::::T:PY:::::P::::T:::::E:V::::D:: hla0298 :::::::::T::V::::::::::GD::T::::A::::::P::::::V:::::V::::R:: HVO_0592 :::::::::RC:A::::T::::A::::A:D::T:::::::::N:::V:::::VL:::G:: Hbo0929 :::T::::::T::::::T::IIA::::A::TTLY::::::::::T::::::::C:::E:: consensus Y---DGDDLPDSVADAEHGVVTDDRAAVFQP------------ #oth 111164544174224.51.331152141253333133222211 NP5300A ::::--E:G:PAP:::::::E:::::::::::::::::::::: HQ1406A ::::KSEP::T::EM:S::I::::::F:SPVQISEETDTTTES Hmu0512 ::::AD::P:A:::::RY::T::RQ:D::A:RNYEYE:::::: rrnAC1935 ::::G::A::-T:DG::Y:::::QDTEI:K::::::::::::: Hut0157 ::::S:WKP:E::::::::ES:TC::T::E::::::::::::: VNG1583 D:::--AAS::::ES:A::TT::VQ::::R::::::::::::: hla0298 ::::PDG:::GPA::::::::A:E::E::EL:::::::::::: HVO_0592 :::::AGPISQG:DE:NY:::A::::T:API:::::::::::: Hbo0929 :SAA::NE:::::E::KY:::::E::::S:ILTDENDGEAL::