|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3169 | VNG1891 | hla0984 | HVO_2369 | HQ3068A | Hbo2068 | NP2434A | Hut2292 | rrnAC3401 | Hmu2210 |
1907 | VNG1891 | 3213 | 1552 | 1592 | 1563 | 1685 | 1615 | 1560 | 1623 | 1632 |
2340 | hla0984 | 1552 | 3263 | 2015 | 1914 | 2052 | 1721 | 1789 | 1831 | 1815 |
2317 | HVO_2369 | 1592 | 2015 | 3264 | 1947 | 2091 | 1731 | 1825 | 1872 | 1857 |
2208 | HQ3068A | 1563 | 1914 | 1947 | 3259 | 2196 | 1595 | 1688 | 1692 | 1784 |
2354 | Hbo2068 | 1685 | 2052 | 2091 | 2196 | 3225 | 1734 | 1765 | 1832 | 1835 |
2139 | NP2434A | 1615 | 1721 | 1731 | 1595 | 1734 | 3242 | 1850 | 1894 | 1973 |
2242 | Hut2292 | 1560 | 1789 | 1825 | 1688 | 1765 | 1850 | 3211 | 1981 | 2013 |
2295 | rrnAC3401 | 1623 | 1831 | 1872 | 1692 | 1832 | 1894 | 1981 | 3200 | 2139 |
2353 | Hmu2210 | 1632 | 1815 | 1857 | 1784 | 1835 | 1973 | 2013 | 2139 | 3162 |
444 symbols consensus MTLDPVHVDGIARLAARIAQRVDDTDHDDLAETVWDEFLDPLY-HDGRV-VLEPLDEQRR #oth 1....1.112..72.452557.13412412.4331322.1.144621551131.221432 VNG1891 :::::::F::::A:::H:THE::AEE:R:::DETFR:::::::GD::P-:::::::DLAK hla0984 V::::I::EN::Q::YG::GD::T:::::::GR::R:W:-:ELR:::::::I::V::HE: HVO_2369 :::::::::D::SM:SS::DS:::A:Y::::R:::ESW::::ESP::GLPIV:::G:KQL HQ3068A ::::::::::::NI::YL::H::::::T:::ANI:EN:::::VDTT::A::C::IS:::L Hbo2068 ::::::::::::D:::YL:RN:::EE:V:::R:::::Y:::::GP::D::::D::G:R:L NP2434A :::::::F::::G::D::SH:::A::::AF::::FE::::::W::::DR:IV:::G:L:: Hut2292 :::::::::::::::G:LGG::E::::::::A:A::::::::::YEDE::I::::G:::: rrnAC3401 ::::::::::::K::GQVRET:ETS:QEAA::E:::S:::::W:Q::TK:I::::::::: Hmu2210 :::::::::::::::GQ:E:G::EQ::RAF:::::Q::::::V:V:::A:::::I::::: consensus RAAPIDDAALADRPFPTQHGLDSGTINPTTFKNGLVLDVAQAAMAAVPSDLDLHRHRTIV #oth 142323.3..3351.2.2....1.....1..1..2.2.2.1..1223.12121..4.121 VNG1891 H::::E:L::QPDA:D:A::::::::::R::T::::::L:::::S:T::E::C::A::TI hla0984 :R::::::::T::::E:V::::::::::::::::::V:::H::::SA:T::::::D:::: HVO_2369 H::D:::V::TES::::V::::::::::::::::::::::H:::::E::N:::::::S:: HQ3068A :V:A:::I:::ET::E:V::::A:::::::::::::::L::::L:::::N:::::::S:: Hbo2068 :SVT:::V::::P::E:A::::::::::::::::I::::::::::::::::::::::S:: NP2434A :RID:E::::Q:A::::::::::::::::::T::::I:I:H::::::::E:S:::S::V: Hut2292 ::::LP:I::EE:::D:::::::::::::::::::::::::::::G:::::::::S::V: rrnAC3401 :KV::E:I::::P:::::::::::::::::::::::::::::::GS::::VE:::G:::I Hmu2210 :KVDMQ::::QAT:::::::::::::::::::::V:::::::::S::::::E:::G:::: consensus ATVHSNDATVDLD-DEWQGLDEG------YARRRVLQAPRVDRYAEGVVHALALYLAESE #oth 422.33.523534332.566.411111112524.23421313.1313...1.1...1.25 VNG1891 TS::::::S::TS:TD::TH::::::::::W:G:IVHTTPLA:DQ:R:::G::::::::H hla0984 ::::AG:S:ANF::G::TSR:D:::::::HT:Q:::H::::N::::::::::::::::GT HVO_2369 MAA:TH:PVQFF:T:::LHS::::::::::G:::::SV:::N:::::::::::::::::A HQ3068A ::T:LA:TV:S:::EP::S::A::::::::C:W:IM::::::::S::::::::::::::S Hbo2068 ::T:A::S:LK:::EP:RK::D::::::::C:W:IIH::::S::::::::::::::S::T NP2434A K::::::R:::CNE:D:S:F:RDGPDGDYFS:G::::::H:N::E:::::::S:::::V: Hut2292 VSA:T::M::::GD:::GRS::::::::::THE:L:EV:::::::QT::::::::::::H rrnAC3401 MA:::::::LGF::G::::G:R:::::::::K::::DV:Q::::EQR::::::::::::R Hmu2210 M:A::::::AS:T:ED:RMD:Q::::::::::Q::::T::::::EQD::::::::::::: consensus HALEHADAVEDLLILDGPIYPKELLNWADRDPELADLLAREAKPRAVVENYVRLVERFVE #oth ..143134.31.12....2..22124.4.1332134.2452341341132.22...4122 VNG1891 ::R:::HR:G:::L::::V:::Q:V:::::HAS::::VTQNELVGE:L::::::::D:AD hla0984 :::D:::E:D:::V::::::::::FT:D::N:::GA:-:::::::::::K:::::::::: HVO_2369 :::::::::S::::::::V::::::::R:::A::K::-::D:::K::::::::::::::: HQ3068A ::::::E::SE:::::::L::V:::::Q::NTTFKT:-ST:T:::SI::::L::::S::K Hbo2068 ::::Y::R:D::::::::L::::::::R:::S::RN:-S:::::KE::K::M:::::::: NP2434A :::DN:E::::::V::::::::G::A:S::S:::::::VENER::D::SS:L::::Q:AD Hut2292 ::RANIGD:S:::::::::::TG:::::::H:::::::ESDEQ::D::::::::::TCL: rrnAC3401 :::TN::V::::F::::::::TGV:R:::::T:::::::EDDR:KT::N:::D::::::: Hmu2210 :::QQ::V:::::V:::::::TG::Q:::H:::::E::VK:D-VL:::::::T:::T:LD consensus RDVPLAGFVKNPASKALVRALRDR-----G-EAPWANDAAFFERLLERRD-DDG------ #oth 121.23.11.12223422211144111115554..32.2.1.442.3.232431343112 VNG1891 :G::::::::S:::Q:::::::::::::::RPT:::T:::::GQV::::E:F::DDH::: hla0984 ::::::::::::S:GTI::::ARK::::::V:P::PD:T:L:T::::::E:G::EGG::G HVO_2369 ::::::::::::GA:HV::TV:KQLDGSDAGRR::VD:::::VS:::::EGA::D::::: HQ3068A :::::C::I::::::R::GT:::::::::DI:V::TD:T:::TQ:::::::N:ATSGQKS Hbo2068 :::::C:::::::::H::N:V:::::::::M:::::D:T:::T::::::AVGN:ETE::: NP2434A :G:::V:V:::S::::IT::V:NE:::::K:R:::V::::::::V:R:TG:::::::::: Hut2292 AEI:IV:::::S:ANG:T::::TK:::::T:G::::::N::::HV:S:Y::G-::::::: rrnAC3401 ::::MV::I::SST:::T::::RK:::::T:N:::V::T:::R:I:::::::E::::::: Hmu2210 :::::I::::STG::::S::V:KN:::::QGQ:::::::::::K::A::::::::::::: consensus ---ERRTDELTFTNWFRSRGGADRTLAADGDALGIERELDPEAYEVTFFVVYDPRTDLLY #oth 2223151121.3.3..3.14.3134323312.2.21.412233.122.22211.141232 VNG1891 :::H:::::::W:C::T:TL:::GVF-::A::::VD:::NAAC:::A:::::::::::VH hla0984 SRPD:VD::::::T:::::::::A:M::::::::::::::::L::P::M::::::::VT: HVO_2369 :::::::::::::S::V::::S::Q:S:E:E:F::::K::::::A:::::L::::::VC: HQ3068A GVE::H:::I:::S::I::S::NA:V::::::Y:LD:H:::LC::TC:C:I:E:QY:I:: Hbo2068 :::R:D:S::::::::V::::S:::F::::::Y:L::N::DDL:::A::::::::::V:: NP2434A ::::L:::A:::::::V::C:V:EP:SKH:::::L::NRP::D:::::CC:F::::E::F Hut2292 ::::L:::A::::::::::I:T::V:SSA:N:::V::::::::::::::AL::::DE:V: rrnAC3401 :::::Q::C::A:::::::::T:GIM:::::::::::S::::::::::::L::::S::VF Hmu2210 ::::LL::A::C:::::::I:T::P:ST:::::::D:::::A:::::::::::::E:V:: consensus RVEAPYAFTRDPDRREALTRQVLADVAAERGPPLAVAKADELARISADEKAALRRKIEER #oth 12.2.32212.335.54224232321.322...4212......113342173.2232237 VNG1891 :::V:RV:AD:::C:A:VE:Y:TSQ::::A:::KP:G:::::::::S:::QE:V::L:RV hla0984 KL::::::A:::SI::R::::::::::TT::::E:::::::::::A:T::I:::::F::: HVO_2369 :::::::::K:::::AD:MHH:VR::::T:::::::E:::::::V:VG::::::::LSDK HQ3068A :L:M::::A::DTT:S:V:Q:IVSE:::R::::A:I::::::::::::::TS:::QFS:S Hbo2068 :::::V::A::ETV:RQ::T:M:R:I:::::::E:::::::::::::R::V:::::L::N NP2434A :::::AVV::::EL:::::M:L:R:I:H::::::::::::::::::R:::R::VKT:::: Hut2292 :I:::::L:::A::::R::M:LV::::::::::V:::::::::::D:TA:DQ::ER:GRE rrnAC3401 :::::::::K::EC:TK::::I:H:::R:Q:::::IG::::::K:DRQGSEE:T:R::RT Hmu2210 ::::::GV:::AET:D:I::::::::::::::::S::::::::::GR:::::::E:::SQ consensus LDSDRQRRYDDVRWGAAEE----- #oth 22223655.125..4686333111 VNG1891 VG:RED:N:::H::-----::::: hla0984 F:::Q:AT:::R:::KEPY::::: HVO_2369 ::::QMKS::NI::VD:D:::::: HQ3068A ::A:EIK::::::::DT:YN:::: Hbo2068 :G::AVW:::::::APN:-::::: NP2434A F:AQEATD:N:E::TGPV-::::: Hut2292 F:::::QS:NEQ:::SKYANGDGE rrnAC3401 FET::E:E:N:I::::V::SF::: Hmu2210 :::::::E:N::::::DF:EL:::