|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1176 | Hut0259 | Hmu2564 | rrnAC3199 | VNG1999 | NP4484A | hla1242 | HQ3114A | HVO_1958 | Hbo1827 |
728 | Hut0259 | 1187 | 666 | 728 | 515 | 617 | 599 | 590 | 630 | 637 |
757 | Hmu2564 | 666 | 1159 | 758 | 508 | 586 | 591 | 562 | 564 | 567 |
795 | rrnAC3199 | 728 | 758 | 1162 | 589 | 644 | 634 | 599 | 614 | 602 |
739 | VNG1999 | 515 | 508 | 589 | 1220 | 590 | 636 | 616 | 627 | 628 |
785 | NP4484A | 617 | 586 | 644 | 590 | 1211 | 663 | 574 | 628 | 646 |
863 | hla1242 | 599 | 591 | 634 | 636 | 663 | 1363 | 740 | 725 | 746 |
807 | HQ3114A | 590 | 562 | 599 | 616 | 574 | 740 | 1253 | 758 | 791 |
868 | HVO_1958 | 630 | 564 | 614 | 627 | 628 | 725 | 758 | 1156 | 894 |
904 | Hbo1827 | 637 | 567 | 602 | 628 | 646 | 746 | 791 | 894 | 1161 |
195 symbols consensus --------MNTIRVVWGTGTAPTAMASYDAALAAANIHNYNLVAVSSVIPADATVEVVDT #oth 11111111142.3113.31312.22111.....2.12.....231...1.1122114222 Hut0259 :::::::::G:::I:S:S:HG::PT:A::::::::GV::::::TL:::V:G:::I:R:G: Hmu2564 :::::::::SV::I::::AGG::ELS:F:::::D:G:::::::TL:::::::PEI:::G: rrnAC3199 :::::::::S::::::::A:G:::L:A::::::E:GV:::::ISL::::::EP:I::TE: VNG1999 :::::::::PR::IA::S:V:::E::A::::::D::V:::::IR:::::::::::SP::: NP4484A :::::::::GR::I::::A:::::::::::::::::V:::::::::::V::::DI::AG: hla1242 ::::::::::::H:AG:V:V:D:::::::::::D::L:::::::::::V::E::::A:EA HQ3114A MTCHRYEYVK::F::R:A:H:S::::::::::::::::::::TT:::::::E::::::E: HVO_1958 :::::::::::::::R:V:::::E::::::::::::::::::::::::V:::::::A::V Hbo1827 ::::::::::::Y::R:V:::::E::::::::::::::::::::::::::::T:::E::: consensus APDLGPAGNRLTVVEARATTAPGG-------------------------RVAAGLGWARG #oth ......3.35.31.12251244533111111111111111111111112522.111.234 Hut0259 ::::::::QG:Y::Q:AE:AEE:E:::::::::::::::::::::::::-A::AI::T:E Hmu2564 ::::::V:AE:HT::SS::A:::E::::::::::::::::::::::::::::::I::S:S rrnAC3199 ::::::P:EA:E::QSS::V:::E::::::::::::::::::::::::::G:::I::::S VNG1999 :::::::::T:::::::GQ::GP::::::::::::::::::::::::::QAS:::A::PR NP4484A ::::::D:E::::::G:T:VP:EKD:::::::::::::::::::::::RSA::A:::::D hla1242 :::::::::Q:::::::R:VG:DDAVDFREGGRAGAEDAESKRAPRRRPD::::::::T: HQ3114A ::::::V::Q:::::::M:::ET::::::::::::::::::::::::::Q:::::::TT: HVO_1958 ::::::::::::::Q::E:::TP:E::::::::::::::::::::::::T:V::::::T: Hbo1827 ::::::::::::::::::::SDA::::::::::::::::::::::::::T:S:::::TV: consensus P-GPGLFYEVSG-TDPDDVRARIEAGLAAGRDLRDWDFDDEEVAVETADA--DDEEYTTA #oth 4311.1...131133324.264243.141.441.1.434335262332432233332121 Hut0259 :D:::I:::::::SNKQT::EDVR::::::::::::::GETQ::L:::S:DGA::A:A:: Hmu2564 ES:R:I:::::::E:::::::E:::::::::Q::::T:V:T:TV:RAVE-::A::::AS: rrnAC3199 ED:::I::::D:::SE:A::ME:RE:::::::::::E:VE:N:Y::S:S-::::A::AS: VNG1999 DGA::::::AADE:T::::AD:VTT:IT::M:V::::GVEPS:RT::VT::::AG:HAA: NP4484A SD:::I:::::::S:::A:EK:LD:::D::LE::E::C:VTGRR:VH::::::PDG:::: hla1242 ::::::::::T::E::::::E::::::D::S:::::ELP:R::H::::A:::TPDRF::: HQ3114A A::::::::AT:::::ES::QT:DD::SS:AT::::S:T:RR:IT:::ERNP:AG::::V HVO_1958 S::::::::A:::::E:S:::AVID::E:::N::E:S:::::::LT:GTH::EG:G:::: Hbo1827 :::::::::A:::A:AEE::HA:::::SS::N::::Q::N:R:TTT:::::::G:G:::: consensus VVIAAYGESEPLF-- #oth 213.2..3.323333 Hut0259 I:L:V::R:HS:IES Hmu2564 ::C::::R:RLGL:: rrnAC3199 ::L:T::::H:VV:: VNG1999 :::::::D:D:V:DQ NP4484A L:L:V::D:D::L:: hla1242 :::::::::::IL:: HQ3114A ::::::::::S::RD HVO_1958 :TV::::Q::SV::: Hbo1827 ITV::::Q:::I:::