|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1423 | Hut2559 | hla1596 | VNG1914 | Hmu2275 | HVO_2222 | rrnAC3303 | NP3056A | Hbo1930 | HQ3123A |
1024 | Hut2559 | 1431 | 901 | 935 | 924 | 826 | 949 | 882 | 822 | 808 |
1172 | hla1596 | 901 | 1844 | 1017 | 963 | 936 | 823 | 1003 | 937 | 941 |
1076 | VNG1914 | 935 | 1017 | 1481 | 1075 | 845 | 961 | 907 | 868 | 821 |
1011 | Hmu2275 | 924 | 963 | 1075 | 1397 | 793 | 894 | 869 | 908 | 829 |
1076 | HVO_2222 | 826 | 936 | 845 | 793 | 1340 | 948 | 992 | 979 | 984 |
1026 | rrnAC3303 | 949 | 823 | 961 | 894 | 948 | 1609 | 1074 | 913 | 835 |
1121 | NP3056A | 882 | 1003 | 907 | 869 | 992 | 1074 | 1501 | 1037 | 978 |
1142 | Hbo1930 | 822 | 937 | 868 | 908 | 979 | 913 | 1037 | 1323 | 1069 |
1087 | HQ3123A | 808 | 941 | 821 | 829 | 984 | 835 | 978 | 1069 | 1391 |
236 symbols consensus ----------------------------------------------------NMDNPTAT #oth 12222222222222233343343222211111111111111111111111114563342. Hut2559 ::::::::::::::::::::::::::::::::::::::::::::::::::::-:GDL::: hla1596 MSPIRRPRFIRATFCAGSDNCHLAAADRPPRARMGRVFRRALLRRDMAREVS:P:::QV: VNG1914 :::::::::::::::MRRADCR:::::::::::::::::::::::::::::::TMPVD:: Hmu2275 ::::::::::::::::::::::::::::::::::::::::::::::::::::---MTRV: HVO_2222 ::::::::::::::::::::::::::::::::::::::::::::::::::::MS:::::: rrnAC3303 :MAAMASLQYVNPRSVGRLFCRASLRL:::::::::::::::::::::::::S:SDL::: NP3056A ::::::::::::::::MSDDASVS::::::::::::::::::::::::::::DPE::::: Hbo1930 ::::::::::::::::::::::::::::::::::::::::::::::::::::-:S::::: HQ3123A ::::::::::::::::MAVDPDVA:::::::::::::::::::::::::::::EQ::LI: consensus LHTTHGDITVELFDERAPRTVENFLGLATGEPA-ADADPAPDT-TWEDPETGET-RGDSL #oth 22.23.1232..12211.4..1..22..21233132223323152.21.112.3112121 Hut2559 :E::::::EI::Y:::V:T::Q::VN::EHD::::::E:::E:P::::::::::::::AF hla1596 :::N:::VV::::AD:::K:::::::::RHD:::::::::R::N::::::S::V:::::: VNG1914 V::SE:EFDI::Y::::::::::::N::RH:::::::::::::V::::::S::I:::::: Hmu2275 :E:SK:::EL::Y:::::::::::::::EHD::::::E:::::A::::::S::I:::::: HVO_2222 :::NK::::::::EDKV:N:::::V::::::KT:---------:-:VH:::D::ME:EP: rrnAC3303 ::::E:E:E:::Y:::V:T:::::V:::E:ADDYDGTEVG:G:GA:::::SS:K::I:P: NP3056A IA:::::::::::EQ:::::::::I:::::ANDYEGT:IE:G:GA::::::::K::I:P: Hbo1930 ::::R::::::::E::::::::::ID:::::KE:---------:-:::::::::::T::: HQ3123A :E::R::::L:::EQ:::Q::::::::::::KE:---------:-:S::D::::::T::: consensus YEGTIFHRIIEDFMIQGGDPTGTGRGGPGYTFDDEFHDDLSHDGPGVLSMANSGPNTNGS #oth .41361..1.33..1.2...211.......3.1...121.4..21.21....1..1.... Hut2559 :QD:PI::::DG::V:M:::::::::::::::::::DS::G::::::V:::::::::::: hla1596 :::NV:::V:::::::::::QES:::::::Q:::::::::T:::::I::::::::::::: VNG1914 :A:VS::::::G::::::::::::::::::E:A:::::::T::::::::::::::D:::: Hmu2275 :::VE:::V:::::::T:::::::::::::Q:A:::::E:R::EA:K::::::::D:::: HVO_2222 ::DIL:::::S::::::::::::::::::::::::::S::::::::::::::R::::::: rrnAC3303 :TDIDI:::::N::::M:::::::::::::S:::::::E::::::::::::::::::::: NP3056A :DDVP:::V:::::::::::::::::::::Q:::::::E:::::::I::::::::D:::: Hbo1930 ::::::::::D:::::::::E:::::::::::::::::E:R::SA:K:::::R::D:::: HQ3123A ::::::::::PE::::::::E::::::::::::::::E::N:::A:I:::::R::::::: consensus QFFITLDAQPHLDGKHAVFGEVIDGMDVVEEIGSVPTDRNDKPMEDVEIESVDIER #oth .....1111...112.....4.31...11.422322.134.4.6532511424133 Hut2559 :::::F::::::::D::::::::::::TL:ALEN:D:GPR:E:E:::RL:A:R:ND hla1596 ::::::::T:::::::::::Q::::::::::::A:::::R:E:RDT::::QITV:E VNG1914 ::::::::::::::R:::::A:T:::::::T::D:E::A::A:ASEIT:DR:E:HE Hmu2275 :::::::::::::D::::::::AE::::::A::NAD::MH:G:TTPIT:DG:E:HD HVO_2222 ::::::::::::N:::::::K:T:::::::D::::::::E:::VS::VL::::V:Q rrnAC3303 ::::::::::::::::::::K:::::::::S::::D:::::A:T:EMLL::::VH: NP3056A ::::::::::::::R:::::Q::::::::::V::L::G:::D:Q:::S:::::VDQ Hbo1930 ::::::G::::::DR:::::::VE::::::::::L:::::::::K::::::I::D: HQ3123A :::::::S::::N:::::::H:VE:::T::D:A::::::D::::Q:I:::ALN:::