|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2412 | VNG1946 | HQ3129A | hla1993 | NP5006A | Hut2938 | rrnAC3272 | Hmu2451 | HVO_2191 | Hbo1902 |
1446 | VNG1946 | 2279 | 1266 | 1290 | 1330 | 1301 | 1147 | 1356 | 1400 | 1343 |
1779 | HQ3129A | 1266 | 2447 | 1473 | 1599 | 1543 | 1354 | 1602 | 1682 | 1721 |
1678 | hla1993 | 1290 | 1473 | 2415 | 1523 | 1508 | 1226 | 1501 | 1597 | 1595 |
1942 | NP5006A | 1330 | 1599 | 1523 | 2422 | 1731 | 1560 | 1815 | 1798 | 1767 |
1945 | Hut2938 | 1301 | 1543 | 1508 | 1731 | 2386 | 1693 | 2016 | 1649 | 1712 |
1795 | rrnAC3272 | 1147 | 1354 | 1226 | 1560 | 1693 | 2091 | 1831 | 1482 | 1572 |
2081 | Hmu2451 | 1356 | 1602 | 1501 | 1815 | 2016 | 1831 | 2457 | 1764 | 1892 |
1978 | HVO_2191 | 1400 | 1682 | 1597 | 1798 | 1649 | 1482 | 1764 | 2451 | 1971 |
2056 | Hbo1902 | 1343 | 1721 | 1595 | 1767 | 1712 | 1572 | 1892 | 1971 | 2738 |
384 symbols consensus ----------MTRELTEITVVGDDKTGLIANVTTLLFERGINIEDLDQAVREGVFRMTLR #oth 11111112333352311211213141122142131111233122132122131311..24 VNG1946 MSSEQHSRSVAENDY::V::::A:R::IV:A::G::::H:A::::VE:T::D:::::::L HQ3129A ::::::::::::G::::::::::::::IV::I:::::::::::V:I:::I:::M:::::: hla1993 ::::::::::::::::::::::G:::::::R::S:::::::::::::::::G::::::T: NP5006A :::::::MAAV:::Y:::::::::D:::::R::::::::D:::::::::::::I::::MS Hut2938 ::::::::VAV:::F:::::::::E::::::::S::::::V:::::::::::::::::TM rrnAC3272 ::::::::::----------------------------------------------::M: Hmu2451 ::::::::VGV:HD::::::::::D:::::E::S:::::S::::::::::::::::::MH HVO_2191 ::::::::::::::::::::I:G:::::::::::::::::::V::::::::::I:::::H Hbo1902 ::::::::::-MTD::::::I:G:::::::::::::::::::V::::::::D:I:::::H consensus VDTS-----EMVCTEETLRAALHDLGDELGVDVQVRFPADRETQRIAVLVTKESHCLEAL #oth 1.3311111214221431152.511122.2..121...41.1235..111...2.112.1 VNG1946 A:CGFADGADP:TDRAAFQ:::D:T::::::::R::::DE:D-DG::::::::D:::R:: HQ3129A A:ID:::::::::::S:::ET:TE:::D:E::I:I:::T::::K::::F::::::::Q:: hla1993 ::A::::::::ETSRGE::R::AE::R::D::I:::::S::DAR:::L:::::T:AP::: NP5006A :::A:::::G:S:::SE::T::SE::::::::I::::::::::RT::::::::::::::: Hut2938 :::::::::::IV::::::ND:Q::AA::D::IT::::K:::::S::::::::::::::I rrnAC3272 :::::::::G::T:::K::ED:TE:::A::::::::::::::::T::::::::::::::: Hmu2451 :::G:::::::::::A:::ND:::::::::::::::::::::::S::::::::::::::: HVO_2191 A::A:::::::T:SRDE:::::S::::D::::::::::S::::RE::::::::::::::: Hbo1902 A::::::::::::::::::D:::::::D::::::::::S::D::Q::::A:::::::::: consensus FEAWANGDL-----GADISVVIGNHDDLEPLAEKYDVPFHDIGDEKGTPDEDRLLDLLAE #oth 1..31522.111112.224.11..123.2211441221.211..23.321.221.21.34 VNG1946 L::----:::::::::PVN:::::::T::AV:DEH:::::::::DT:::::E:::E:::A HQ3129A L::H:T:E::::::D:EL:::::::GN::::VTQ:EI::V::::DS:I::::QV:SV:D: hla1993 L::E:A:::ADDGEE:E:P::V::RG::RS:::R::K::Y:V::GN:NT::E:::::::: NP5006A :::::D:E::::::::::::I:::::::::::DH:G:D:YN::::::::::E:::E::DD Hut2938 :::::S:N:::::::::VE::::::P::Q::::::E::::::::::::::::E::::::: rrnAC3272 ::::::::::::::::::E:::::::::::::A:::::::::::::::::::Q::::::Q Hmu2451 :::::S:N::::::::::D::::::P::R::::::::::::::::::::::GE:::::S: HVO_2191 ::::::D:::::::::E:::::::::T:::::SH::::::::::::::AN:E::::::ER Hbo1902 ::::::::::::::D:::::::::R:H:R::::R:::::YNV:::::S::::E:::::D: consensus YDADLIVLARYMRILSPDVVFRYEDRIINVHPSLLPAFPGAAAYRQAKEEGVRIAGVTAH #oth .23..21........1.31....131.1.1......1....3..1..311...1...... VNG1946 ::T::V:::::::::::::::::AGH:V:::::::::::::Q:::::V:A:::V:::::: HQ3129A :QI::A:::::::::::KI:::::::::::::::::S::::::::::::::::::::::: hla1993 ::V::::::::::::::E::::::G::::::::::::::::E::::::DA:::V:::::: NP5006A ::T::::::::::::::N:::::::::::I:::::::::::E:::::R:::::::::::: Hut2938 ::T:::::::::::::::::::::N:::::::::::S::::S::M::I:::::::::::: rrnAC3272 ::::::A:::::::::::::::::S::::::::::::::::S::M::I:::::::::::: Hmu2451 :N::::::::::::::::::::::S::::::::::::::::S::M::I:::::::::::: HVO_2191 ::V::V:::::::::G:N:::::::::::I:::::::::::::::::::::::::::::: Hbo1902 :::::V:::::::::::N:::::::::::I:::::::::::::::::::::::::::::: consensus YVTTDLDQGPIITQRAFNVPDDASEEEIKRRGQPLEADALLEAVRLHLDDAVSVHRGRTK #oth ..........111..1.21.23.24232352......11.23.141..32325121.216 VNG1946 :::::::::::L:::::T::PN::VAAV:D::::::::::VA:::A::AGDTT:R::AVA HQ3129A :::::::::::::::::D:::::DV:T:RN:::::::::::::IE::::NTI:::::::G hla1993 ::::::::::V:A::::D::PG:DVA::::::::::::V::N::::::A::IAI:::TVH NP5006A ::::::::::::::::::A:AG::T::LE::::::::E::::::Q::::N:TH:YH:::E Hut2938 ::::::::::V::::V::::PE:T:::LQEI::::::E:::D:ID:::N:EIY::::::R rrnAC3272 :::::::::::::::::::::::T:::LQQI::::::E::I::IK:::::E:N::::::: Hmu2451 :::::::::::::::::::::::T::QLQQI::::::E:::::I::::E:E:T::::::: HVO_2191 ::::::::::::A::::D::::::ID:::E::::::::::::::K:::NND::::::::S Hbo1902 :::::::::::::::::D::::::L::::SL:::::::::::::Q::::::::::::::S consensus LRE-ADETDAQLGLPEEADALNPDRPIDGLGEAVSG------------------------ #oth 125353564211132444535311312124545433211111111111111111111111 VNG1946 VDG:----------:H:YG::A--------------:::::::::::::::::::::::: HQ3129A :HSGT:SSEY:::::KDIE:IQ::D:::THESDT--:::::::::::::::::::::::: hla1993 V:::DTTV::::::S:A:VDA:::E:V::EPLSQ:::::::::::::::::::::::::: NP5006A ::DDV:TD:Y::::::SF:EMV::::V::::::::::::::::::::::::::::::::: Hut2938 ::::PE:::::::A:K:L:D::::::::::::I::E:::::::::::::::::::::::: rrnAC3272 ::D:PE::S::::A::KL:Q::::::::::::F:A::::::::::::::::::::::::: Hmu2451 ::N::::V:::::A:R:L:EQ:::::::::::F:A:E::::::::::::::::::::::: HVO_2191 :::S::PERY::::TR::Q:S:::::V::IID:L-:E::::::::::::::::::::::: Hbo1902 ::PG::DA:Y:::MTD::T:A:::::::::AD:LQADVGVADGGTVDDGASTDEEEQREA consensus -----------DDE-E------DD #oth 111111111114434222232241 VNG1946 :::::::::::---:-:::::::: HQ3129A ::::::::::::TTS:PVSDVVN: hla1993 :::::::::::ASTA:::::::S: NP5006A :::::::::::---:-:::::::: Hut2938 :::::::::::---:-::::::GE rrnAC3272 ::::::::::::::L:A::::::: Hmu2451 ::::::::::::::I:A::::::: HVO_2191 :::::::::::REALAP::EPSE: Hbo1902 EAADSDTPESNE::A:AAPNPS::