|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2779 | Hut1098 | VNG1397 | HQ2566A | hla2377 | HVO_1668 | Hbo3169 | NP3372A | rrnAC0866 | Hmu1624 |
1415 | Hut1098 | 1969 | 1146 | 1244 | 1268 | 1243 | 1296 | 1245 | 1291 | 1239 |
2020 | VNG1397 | 1146 | 2808 | 1745 | 1826 | 1763 | 1810 | 1926 | 1729 | 1890 |
2099 | HQ2566A | 1244 | 1745 | 2803 | 1787 | 1900 | 2101 | 1856 | 1787 | 1827 |
2262 | hla2377 | 1268 | 1826 | 1787 | 2800 | 1996 | 2055 | 1936 | 1955 | 1916 |
2216 | HVO_1668 | 1243 | 1763 | 1900 | 1996 | 2692 | 2107 | 1858 | 1861 | 1810 |
2310 | Hbo3169 | 1296 | 1810 | 2101 | 2055 | 2107 | 2787 | 1938 | 1851 | 1868 |
2234 | NP3372A | 1245 | 1926 | 1856 | 1936 | 1858 | 1938 | 2798 | 2019 | 2005 |
2160 | rrnAC0866 | 1291 | 1729 | 1787 | 1955 | 1861 | 1851 | 2019 | 2782 | 2101 |
2135 | Hmu1624 | 1239 | 1890 | 1827 | 1916 | 1810 | 1868 | 2005 | 2101 | 2779 |
372 symbols consensus -MDLGSADAFDRMGTLGIEEEFYVVDEDGRPTAGIDELVYE--REPPEPLAGRLDHELFK #oth 133311332142321112111122114514121.23212131183134535323111112 Hut1098 :------------------------------V::T------::----------------- VNG1397 :::V::PE::SES::::V::::F::::H:V::::S::::::::G:::::I:::::::::: HQ2566A :::V:::::::::::::V::::F:::DS:Q:::::Q::I:DYNHP:AGV::D:::::::Q hla2377 ::E:::R:::A::E:::::::::I::A:::::S:::D:::G:::D::AEVPEGF:::::: HVO_1668 :-----------:::::V:::::I::A:::::S:::D:::G::P:::::::::::::::Q Hbo3169 ::E::::::::::::::V:::::I::S::Y:AS::SD:I:D::DP:EGL:GD:I:::::: NP3372A ::::::RE::::T:::::::::F::::Y::::::T::::::::N::::::KD:::::::: rrnAC0866 MDAT:::EH:T::::::::::::::::F::::S:T::::::::T:::AV:D::::::::: Hmu1624 MEET:::A:::::::::::::::::::Y::::::S::::::::SD::TI:D::::::::: consensus FVIETQTPLIEDPSEADDALRTVRAALVDHAAAHGYRIAAAGLHPAAKWRELEHAEKPRY #oth 32212112324433426443441.4.1132134313211211111412111331231111 Hut1098 --------------------::R:K:AIS------------------------------- VNG1397 ::V:::::TLNGVA::PA:I:E::::::AY:SE::L:::G:::::G:R:::H:::::::: HQ2566A :::::::::L::V:AVSESVQA::D:::T:::D::::::::::::T:::::RN:V::::: hla2377 CT::A::E::::::N:V:::S::::::::::::D:::::::::::::::::::::::::: HVO_1668 :T:::::::::::D::GA:VS:::E:::::::::::::::::::::::::::D::T:::: Hbo3169 :TV::::::::N:::::ELV:A::E:::S:::D:::::::::::::::::::D::T:::: NP3372A C:::::::T:GSL:A:::::AE::K:::S::ET::FG:::::::::::::::D::::::: rrnAC0866 C:::::::R:D::AN:G:H::S::D::::::E:N:FG::::::::L:::::::::::::: Hmu1624 T:V:::::TLDGLDD:RS::ED::N::::::E:N:F:::::::::L:::::::::Q:::: consensus RSQLDRIQYPQHRNTTAGLHVHVGVDDADKAVWIANELRWHLPPLLALSANSPYWNGFDT #oth 321.................1......111.1.11.22..12132...1....1...1.. Hut1098 -VT:::::::::::::::::::::::::E:::::::KI:::::IV:::A::::::::::: VNG1397 ::::::::::::::::::::I::::::P:::::VS:RM:::M:V:::::::::::::::: HQ2566A Q::::::::::::::::::::::::::P:A:T::::::::Y::::::::::::::::::: hla2377 QA::::::::::::::::::::::::::::::::::R::::C:V:::::::::F:::::: HVO_1668 QA:::::::::::::::::::::::::::::::V::::::Y:A::::::::::F:::::: Hbo3169 K::::::::::::::::::::::::::P:::T::::::::Y::::::::::::F:::::: NP3372A :A::::::::::::::::::I::::::::::::V::::::YM:VM::::::::::::::: rrnAC0866 K::::::::::::::::::::::::::::::::V:::::::::LM::::::::::::::: Hmu1624 :::::::::::::::::::::::::::::::::::::::::::LV::::::::::::Y:: consensus GLASARAKIFEALPNTGMPTAFEDFEAFQRFERRMVETGSIDDRGELWYDVRPHTGHGTV #oth ..2...1.2..2.....2.12.111221342.21.2.311.6......1.....111... Hut1098 ::S:::::L::G::::::::T:DS::S:H:::Q::I::D::S::::::F::::::EY::: VNG1397 :::::::::::G:::::L:::::SYA:::A:::::::H:G:E::::::::::::S::::: HQ2566A ::::::::::::::::::::R::::::YYQL:K::::::::K:::::::::::::::::: hla2377 :::::::::::N:::::I:S::D::D::::Y::::::R:::A::::::F::::::::::: HVO_1668 ::::::::V::N::::::::::D:::E::::::::::Y:::::::::::::::::::::: Hbo3169 ::S::::::::N:::::::SR::::::Y:::::::::H:::E:::::::::::::::::: NP3372A ::Q:::::::::::::::::::::::S::S:::T:::::::N::::::::::::SE:::: rrnAC0866 ::Q:::G:::::::::::::T:D:YD::ETY:Q::L::::::::::::F:::::S::::: Hmu1624 :::::::::::G:::::::::::SYA:YEQ::::::::D::R::::::F:::::S::::: consensus EVRTPDAQADPDRVLAFVEYVHALVLDLAARYEDGESG---TTLRRELLDENKWRAIRHG #oth .1.11.1.311441312...311..5221311211222111374...3..1...1.3.2. Hut1098 ::::A:::::I:::::L:::::E:::::::::::::TI::::AV:::::::::::::::: VNG1397 :::A:::::::AV:D:::::A::::TEY:Q::D:HPDPFSV:G:::::::A:::::M:D: HQ2566A :::::::::::SVTV:I:::I::::M:F::::A:::::::::KV:::I::A:::H:M:Y: hla2377 :::A::::R::GVT:::::::::::V:Y:E::A::::P:::P:::::::::::::::::: HVO_1668 :I::::::T::E::TD:::::::::::::D:::A::::::::SV::::::::::::T:Y: Hbo3169 ::::::::S::EKT:::::::::::::::::::::::::::::I::::::::::::T::: NP3372A ::::::G:::::H:::::::TQ:::E::S::::::::::::ANH::::::::::::L::: rrnAC0866 :::A::G:::::::::::::::E::V:::E:::::::::::RR::::F:::::::::::: Hmu1624 ::::::G:RN:EY::::::::::::AS::DQF:::A::::::DT:::Y::::::::M::: consensus HDASFIARDGEETVSLGELVERECDRLGVDGLRDLYDAESGAERQRRLRAEEGLDALCDS #oth 2212124243443331433135133..1211143233211.253...134452433.343 Hut1098 RE::::T:::A::ID:MTAI::DRS::DL:R:AS:VA:::::T:::::-::DSV:R:YS: VNG1397 :::::V::ETQGA:D::TV:D::::::::S:I::V::DV:::QQ:::ILDTH:EKR:YNH HQ2566A R::E::IPGSM:::T:S:F:D::TN:::::::TT:LAR:G::KK::::H:SDNI:T:LE: hla2377 ::::::T::::D::::::A:AD::::::I::I::V::::::SQ::::::E:G:::::::D HVO_1668 R:TD:::P:S:GV:::VSF::T:S:::::::::S:L:::::TAV:::IHE:S:::G::EH Hbo3169 :::::::L:::G::::EQF:IE:::::D::::K:IF:::::::::::IH:D:S::T::NV NP3372A :::ELLD:SL::S:P::::::S::Q::::S:I::V:E::::::K::::LES::M::::G: rrnAC0866 QS:ELLS::LST:R:VE::::I:S::::::::WE::HR:::::::::::S:::VM::A:: Hmu1624 ::::LLT:T:S-:AP:::::D:::::::I::::T:::R::::N::::::-KQ:VAT:A:D consensus LCLD-------- #oth .61553421111 Hut1098 :LVEDPRRPSPR VNG1397 :S:-:::::::: HQ2566A ::::TDT::::: hla2377 :M:SP::::::: HVO_1668 :T:::::::::: Hbo3169 :::N:::::::: NP3372A :SVEWDSS:::: rrnAC0866 :R:S:::::::: Hmu1624 :V:QKNA:::::