|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2434 | NP4044A | rrnAC1268 | Hmu1706 | hla2432 | Hut0503 | VNG1125 | HQ3355A | HVO_1304 | Hbo0238 |
2115 | NP4044A | 2434 | 1967 | 1983 | 1978 | 1988 | 1998 | 1924 | 1928 | 1935 |
2132 | rrnAC1268 | 1967 | 2439 | 2175 | 2029 | 2060 | 1970 | 1910 | 1949 | 1906 |
2202 | Hmu1706 | 1983 | 2175 | 2447 | 2048 | 2111 | 2033 | 1984 | 2026 | 1942 |
2165 | hla2432 | 1978 | 2029 | 2048 | 2448 | 2106 | 2013 | 1976 | 2022 | 2001 |
2186 | Hut0503 | 1988 | 2060 | 2111 | 2106 | 2423 | 2019 | 1953 | 1965 | 1956 |
2164 | VNG1125 | 1998 | 1970 | 2033 | 2013 | 2019 | 2448 | 1986 | 2029 | 2016 |
2125 | HQ3355A | 1924 | 1910 | 1984 | 1976 | 1953 | 1986 | 2446 | 2185 | 2202 |
2176 | HVO_1304 | 1928 | 1949 | 2026 | 2022 | 1965 | 2029 | 2185 | 2452 | 2220 |
2137 | Hbo0238 | 1935 | 1906 | 1942 | 2001 | 1956 | 2016 | 2202 | 2220 | 2437 |
313 symbols consensus -MSAFSAIGEEREIDRDEFTPGIEPQATWCPGCGDFGVLKALKGAMAELGRNPEEVLLVT #oth 1111.1..21241412321...2...1.........2......1.21.1.24.1.3224. NP4044A :::::N::DDSEDVE::D::::::::::::::::::A:::::::::::::K::::::::: rrnAC1268 ::::::::N:::::E::::::::::::::::::::::::::::Q::P:V:K::D::A:F: Hmu1706 :::::::::D:::V:::::::::::::::::::::::::::::Q::P:V::::D::A:F: hla2432 :::T::::::::::::::Y:::V:::P:::::::::S::::::Q:LP:V::T:::T::C: Hut0503 ::::::::::D::::SE:Y:::::::::::::::::S::::::Q::P:V::T:::::T:: VNG1125 MSK:::::D:D::V:::A::::V:::P:::::::::::::::::::::::KD:::I::A: HQ3355A :::::::::::Q:H::S:Y:::L::::::::::::::::::::::A::::LA:::M:VC: HVO_1304 :::::::::::T:Q:QN:::::L:::P::::::::::::::::::A::::LS:D:MMVT: Hbo0238 :::::::::::A:R::N:Y:::L:::P::::::::::::::::::A::::LS:::M:V:: consensus GIGCSGKLNSYFNSYGFHTIHGRSLPVARAAKLANPDLEVIAAGGDGDGYGIGGNHFMHT #oth .....1..1..121....11...1..1.....1..3211.1...............12.. NP4044A ::::::::S:::E::::::L:::A::I::::::::::::::::::::::::::::::A:: rrnAC1268 ::::::::::::::::::::::::::::::::::::N:::::::::::::::::::TI:: Hmu1706 :::::::::::::::::::::::::::::::::::::V:::::::::::::::::::::: hla2432 :::::::::::LDT:::::::::::::::::::::::::::::::::::::::::::I:: Hut0503 :::::S::::::D:::::S:::::::I::::::::::::::::::::::::::::::::: VNG1125 ::::::::::::D::::::::::::::::::::::H::::V::::::::::::::::::: HQ3355A ::::::::::::E:::::::::::::::::::V::DG:T:V::::::::::::::::::: HVO_1304 ::::::::::::::::::::::::::I:::::::::G:T:V::::::::::::::::::: Hbo0238 ::::::::::::E:::::::::::::I::::::::SG:T:V::::::::::::::::::: consensus ARENHDMTYIVFNNEIFGLTKGQTSPTSPKGHKSKTQPHGSAKSPIRPLSMSLNAGASYV #oth ......11.......1.............1........1....3.11...23111..1.1 NP4044A ::::::I::::::::::::::::::::::::::::::::::::D:::::::G:TS::::: rrnAC1268 ::::::::::::::::::::::::::::::::::::::::::::::::::QQ:::::T:I Hmu1706 ::::::::::::::::::::::::::::::::::::::S:::::::::::LA:TS::T:: hla2432 :::::::A::::::::::::::::::::::::::::::S::::E::K::::::::::::: Hut0503 ::::::::::::::::::::::::::::::::::::::S:::::::::::LA:TS::::I VNG1125 ::::::I::::::::V::::::::::::::::::::::::::::::::::L:MTS::::: HQ3355A :::::::::::::::::::::::::::::::::::::::::::D:::::::A:::::::: HVO_1304 ::::::I::::::::::::::::::::::M:::::::::::::T:L:::::::::::::: Hbo0238 ::::::I::::::::::::::::::::::::::::::::::::E:L:::::::::::::: consensus ARTAAVNPNQAKEIIVEAIEHDGFAHVDFLTQCPTWNKDAKQYVPYIDVQDSDDYDFDIT #oth 1..........21.12...1.1..1.1.............11....2.112.11122.51 NP4044A S::::::::::Q::L::::::N::S:I:::::::::::::::::::::::Q::E:G::H: rrnAC1268 :::::::::::::::A::::::::::I::::::::::::::H::::T:::Q::EF:::VS Hmu1706 :::::::::::::::A::::::::::I::::::::::::::H::::T:I:Q:::::::TS hla2432 ::::::::::::::LI::::::::::::::::::::::::R::::::::NE:::::::K: Hut0503 ::::::::::::::L:::::::::::::::::::::::::::::::T::::::::::::: VNG1125 ::::::::::::D:L::::Q::::::::::::::::::::::::::V:::E::E::::V: HQ3355A :::::::::::RD:::::::::::S:I:::::::::::::::::::::IN:::E::V:T: HVO_1304 ::::::::::::D::::::Q::::S:::::::::::::::R:::::::IN:::::E::N: Hbo0238 ::::::::::::D::::::Q::::S:::::::::::::::::::::::IN::E:::I::S consensus DRREAAEMMFETENALYEGEVLTGRYYVDEDRPSYQEEKQAIGEMPEEPLAERYFDDDYE #oth 1.52.331.412.33.11.11....2.312312..22..233.11..111.12.21221. NP4044A :::::S:::Y:A:S:::::::::::F:H:D::L::G:::R:V:::::R::::Q:HE:::: rrnAC1268 ::A::::::RK::ER::::::::::M:IEDE::::G:::RQ:::::::::::::::E:A: Hmu1706 N:E::QK:::::::K::::::::::::::DES:::::::::T::::::::::::::E::: hla2432 ::V::::::R:::ES::::::::::F::::::Q::GA:::::::::::::::::W::::: Hut0503 :::::G:::H:V:DK:::::I::::F:::::::::T::::::::::::::::K:::A:A: VNG1125 :::::Q:L:T:::E:::D:T:::::::Q::Q:::::A:::SR:D:::::V:K:::::::: HQ3355A ::ST:SQL::::::::H::T:::::::::NN:::::Q::KRT::I:::::::K::::E:: HVO_1304 N:S::S::::::::::H::T::::::::::::::::Q:::R::::::::::::::::S:: Hbo0238 ::KS::D::Y:::D::H::T:::::::H::::::::Q::RR:::I:::S::::::::E:: consensus WERSYD-LLDKHK #oth .1.23.52113.3 NP4044A ::::::::::A:R rrnAC1268 :::T::N::EH:: Hmu1706 :::TA:S:::H:: hla2432 ::::H:KF::::A Hut0503 :D:::::::ER:T VNG1125 ::::F::VI:R:: HQ3355A :D:V::TF::::: HVO_1304 :::TF:NF::::: Hbo0238 :::TH:LF:::::