[R] (-) COG1439 Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module 9 genomes BUD0583 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG1994 rrnAC3206 HVO_1965 Hbo1834 Hmu2558 Hut0339 hla1192 NP4986A HQ3076A

Pairwise sequence scores
Consensus score	1168	VNG1994	hla1192	HQ3076A	HVO_1965	Hbo1834	NP4986A	Hmu2558	rrnAC3206	Hut0339
587	VNG1994	844	519	513	556	547	539	556	501	567
864	hla1192	519	1149	777	797	792	751	786	771	754
936	HQ3076A	513	777	1166	852	920	824	834	856	830
915	HVO_1965	556	797	852	1164	978	762	864	846	864
983	Hbo1834	547	792	920	978	1171	819	884	868	890
945	NP4986A	539	751	824	762	819	1161	905	858	894
1043	Hmu2558	556	786	834	864	884	905	1171	1013	1015
978	rrnAC3206	501	771	856	846	868	858	1013	1145	988
1006	Hut0339	567	754	830	864	890	894	1015	988	1180

155 symbols
consensus       MQVLDSSAFINEYHTDDQTASIPLVREELEDEAAYRFDALEGSGMHIHIPAPETVERVRR
#oth            16211311112212122542221314211231433111131121.23.1.3532214131
VNG1994         --------------------------------------------:RV:V::QDAR:A::Q
hla1192         :E:::T::::H::T:::TVV:V:E:H:::TG:G:L::::M:::::T::V::::VLDN:::
HQ3076A         ::::::::::H::::T:D:::::M:::::::::::::::D:::::::::::GG::DTIK:
HVO_1965        :RI::A::::H::::::E:::::::K:::TG:H:F:::::::A:::V:::GQG::DK:L:
Hbo1834         ::::::::::H::::::::::::::SD:::G::SF::::M::A::::::::SG:::KI::
NP4986A         :H:::::::::D:T::E:L:T:::::::::S::G:::::::::::R::::D:::::::K:
Hmu2558         :YI:::::::::::::EPI:::::::::::::S:::::::::::::M:::E:::::::E:
rrnAC3206       :Y::::::::::::::E:I:T:::::::::::::::::::::::::L:::EDN::::IE:
Hut0339         :N:::A::::::::::E:L:T:::::::::::S:::::::::::::L:::DE:::::I::

consensus       AARETGDAEELSDTDIRLIAAAFELDATLVTDDYAMQNVAEKLDVAVEVIAQDGIDEQRD
#oth            ..421..222..5..3..1.1.2..123..1........1231425.13.111..5.3.3
VNG1994         ::AT::::DV::E::R::L:T:H:::G:::S:::::::::AE:A:T::S:S::::T:R::
hla1192         :::GS:::A::::::T::::T:L::S:::::::::::::::R::IS::A::R:::T:E:E
HQ3076A         :::::::::T:::::V::L:T::::::V::::::::::::DHV::T:NI::R:::K:A:N
HVO_1965        ::G::::RDV::E::T:::::::::::::::::::::::::R:N:G:::::::::A:::T
Hbo1834         ::G::::R:T::::::::L::::::::::::::::::::::RVN:H:N:::::::E::::
NP4986A         :::::::::T::R:::::L:T:::::GV::::::::::::D:::T:::::::E::::R::
Hmu2558         ::D::::LA:::Q::V::::::::::GR:::::::::::S:::S::::::::::::::::
rrnAC3206       ::S::::LA:::A:::::::::::::SR:::::::::::::::::::::::RE::S:::E
Hut0339         ::D::::L::::T:::::::::::::GE:::::::::::::::EID:::::::::E:::E

consensus       WRFQCQGCGREFDE-NHDRCPICGSDLSRKNPA--
#oth            .52..2..1.1.111221..11..13.3..1.211
VNG1994         ::L::::::::::DTD:::::V:::P:E::::S::
hla1192         :::::V::N:T:::::KE:::::::::T:::::::
HQ3076A         :IY:::::::::E:::RE:::::::E:A:::::::
HVO_1965        :K:::::::::::::DKE::::::ME:::::::::
Hbo1834         :::::::::::::::HK:::::::ME:A:::::::
NP4986A         :NY:::::::T::::H:E::Q::::::E::R:-::
Hmu2558         :::::::::::::::::::::::::::::::::::
rrnAC3206       :L:::A::::::::::R::::::::S:::::::::
Hut0339         :H:::::::::::::::::::::::P::::::SSA