9 genomes BUD0596 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG0233 rrnAC1681 HVO_0650 Hbo0877 Hmu0637 Hut0334 hla2727 NP0614A HQ1287A

Pairwise sequence scores
Consensus score	563	NP0614A	VNG0233	Hut0334	rrnAC1681	Hmu0637	HQ1287A	hla2727	HVO_0650	Hbo0877
379	NP0614A	611	305	299	329	326	314	392	373	357
399	VNG0233	305	577	360	384	368	306	299	377	375
400	Hut0334	299	360	651	413	414	322	346	339	332
429	rrnAC1681	329	384	413	570	471	313	368	364	374
431	Hmu0637	326	368	414	471	642	329	364	365	366
402	HQ1287A	314	306	322	313	329	694	345	366	424
449	hla2727	392	299	346	368	364	345	752	408	401
459	HVO_0650	373	377	339	364	365	366	408	631	492
456	Hbo0877	357	375	332	374	366	424	401	492	655

114 symbols
consensus       -----------------------MPTDEEVVETAAEAAEGVVFARYDQSAVTDLDVTVTF
#oth            111111111112333434554535.31121.21.141..1111222231413.3.1..2.
NP0614A         ::::::::::::::::MTADDSDE::AD:I::V:SD::::LILS::K::E:::M::::R:
VNG0233         :::::::::::::::::::::::::N::::::::::::::L:LD:LRT:D:D:::I::::
Hut0334         :::::::::::MSDDATASTDAET:A::T::::::AT::D:::S:L:R::ID::::::::
rrnAC1681       :::::::::::::::::::::::::::D::::::SA:::D:::S:::VG::E::::::::
Hmu0637         ::::::::::::::MSTDQSHSDD::::A::::::T:::D:::S:::TG::E::::::S:
HQ1287A         :::::::::::MHEHETIVMSPST:S::A::Q:::D:::::I::E:R::T:::V:I::S:
hla2727         MSDESSDGPTDGPRDVADEAADEG:::D:::R:::K::::::::H:::::::::::::::
HVO_0650        :::::::::::::::::::::MSQ::::::::::::::::LI:::FK::R:K:F::::::
Hbo0877         ::::::::::::::::::::::::::::T::::::::::::I::::K::D:K:F::::::

consensus       EDGVLDVDVYLNAPDDRA---DADAVADEAALAAQAAVDELFAA----------
#oth            .112.11.1.211..3453111344..311121.33...1..344232111111
NP0614A         :::T::::I:::::::P-::::PG:::Q::VE::ES::::::E-::::::::::
VNG0233         ::::::::I:VR:::AD:::::VEQ:::DG:::::::::D:::DE:::::::::
Hut0334         ::K::EI::::::::A::::::PET:::D:::::RS:::D::D:::::::::::
rrnAC1681       ::::::::::V::::S:Q::::EAQ:::D:::::R::::D::EE::::::::::
Hmu0637         :::::::::::::::G:H::::ESR:::D::::::::::D::SS::::::::::
HQ1287A         :S:::E::::::I:::VSP::P::D::::::RT:::::::::DETQG:::::::
hla2727         ::::::::::::::::P-::::P::::R:::ET:GE::::::E:::::::::::
HVO_0650        ::::::::::V:::::ADDAD::E:::E::::T::E::::::::ADEE::::::
Hbo0877         :::I::::::I:::::ADA:::::D::::::RT::D:::::::ESDADSDANAA