|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3746 | VNG0345 | hla0116 | Hut0390 | rrnAC1642 | Hmu0858 | HQ1266A | NP1220A | HVO_0684 | Hbo0852 |
3031 | VNG0345 | 3725 | 2728 | 2850 | 2768 | 2695 | 2665 | 2787 | 2798 | 2820 |
3151 | hla0116 | 2728 | 3716 | 2869 | 2806 | 2700 | 2814 | 2880 | 2965 | 2953 |
3298 | Hut0390 | 2850 | 2869 | 3744 | 3013 | 3001 | 2787 | 2922 | 3038 | 3017 |
3140 | rrnAC1642 | 2768 | 2806 | 3013 | 3798 | 3225 | 2722 | 2782 | 2873 | 2833 |
3061 | Hmu0858 | 2695 | 2700 | 3001 | 3225 | 3788 | 2637 | 2806 | 2818 | 2784 |
3016 | HQ1266A | 2665 | 2814 | 2787 | 2722 | 2637 | 3724 | 2882 | 2903 | 3050 |
3224 | NP1220A | 2787 | 2880 | 2922 | 2782 | 2806 | 2882 | 3728 | 2867 | 3061 |
3288 | HVO_0684 | 2798 | 2965 | 3038 | 2873 | 2818 | 2903 | 2867 | 3734 | 3212 |
3327 | Hbo0852 | 2820 | 2953 | 3017 | 2833 | 2784 | 3050 | 3061 | 3212 | 3735 |
508 symbols consensus MTAQAAEQRDLTAVIGLEVHVQLETDTKIFCGCSTDA-EDEEPNTRTCPVCLGLPGALPV #oth .1121344222121...........2.....1...2634211...21..1......1..1 VNG0345 :S:::::-:::::I::::::::::::::::::::::T:D:AD:::H:::::::::::::T hla0116 :ST:::T-EER:V::::::::::::::::::::::EPE:::::::::::T:::::::::: Hut0390 :::::IQE::::V::::::::::::A::::::::::L:::AD:::H::::::::::S::: rrnAC1642 :::::S:A:E:A:::::::::::::E::::::::::V:A:A::::H:::::::::::::: Hmu0858 :::::::S:E:AT:::::::::::::::::::::::-:SG:::::N:::::::::::::: HQ1266A :::T:LA:::F::::::::::::::::::::::::RD:NNA::::::::::::::::::: NP1220A ::::T::EHS:::::::::::::::::::::::::::DDN:::::::::::::::::::: HVO_0684 :::::L:::E:AV::::::::::::A:::::S:::EPA::::::::V::::::::::::: Hbo0852 :::K:LS::::AT::::::::::::::::::::::::A:::::::::::::::::::::: consensus LNEGAVEAAVKVGKAIDADIPEETRFHRKNYYYPDLPKNFQITQYDAPICQDGELEFSVE #oth 1.11...1..12...12121116.2......1......1..11...1...32.2.12322 VNG0345 :::::::::::L::::::::::R::::::::F::::::G:::::::::::::::::VGTA hla0116 :::::::::::I::::::::::T:T::::::::::::::::L:::::::::S::::VR:D Hut0390 ::::::::::R:::::::::::Q:::::::::::::::::::S::::::::::::::::: rrnAC1642 V::::::::::::::::::::A::T:::::::::::::::::::::S::::::::::::: Hmu0858 :::A:::S:::I::::::S:::::T:::::::::::::::::::::S:::::::::::H: HQ1266A ::KA:::::::::::LN:::A:K:Q:::::::::::::::::S:::::::S::Q:SI::: NP1220A :::::::::::::::LSS::::::::::::::::::::::::::::::::DG:::::A:D HVO_0684 :::A:::S:::I:::LN:::A:D:::::::::::::::::::::::::::A::T::V::: Hbo0852 :::::::::::::::L::TVA:H:::::::::::::::::::::::::::A::T::V::: consensus GERRTVGIERAHLEEDPGSLQH----------AGGSIDTADYTLVDYNRAGTPLMEIVTE #oth 232.412.2..........13.11112111214122.12.21..11.....1..2....3 VNG0345 DD::AI::::::::::::::::::::::::::V::::ED::::::::::::::::::::R hla0116 S:P::I::T::::::::::::::::::::::::::::E::TH:::N:::::::::::::: Hut0390 :::::::::::::::::::::::::::::::::::N:::::::::N:::::V:::::::: rrnAC1642 S:::S:D:R::::::::::IK:VREGSGPLESRTC::ER:::::I::::::::::::::: Hmu0858 :DS:::::R::::::::::IK:VREGTGPLDSRTTG::R::::::::::::::::::::R HQ1266A DN::E:A:R:::::::::::T:::::::::::Q::N::::E::::::::::::::::::: NP1220A D:::::A:::::::::::::S:::::::::::::::::::EH::::::::::::L::::A HVO_0684 :T::DI::T:::::::::::::::::::::::K::::::::::::N::::::::V::::: Hbo0852 ::::E:::::::::::::::::::::::::::K::::::::::::N:::::::::::::K consensus PDFRSPAEVRAFLAKLEEVLEYLGVFDATRDGSLRIDANISLVDADEVGDDGSIDDDVLE #oth ....215.1.1..2..11......1..211.....1...2.2113322432.413432.1 VNG0345 ::::AAE:::S:::::TS::::::::::E::::::V:::::M::SA:LAGE:GPS::::: hla0116 ::::::::T::::::::::::::::::P:::::::V:::V:::PES::AA::T:S::A:A Hut0390 ::::DAT:::::::::::::::::I::::::::::::::L:::::AD:D::::::Q:::: rrnAC1642 ::::A:G:::S::E:::::::::::::::::::::::::L:::::S:::E::D::KS::: Hmu0858 ::::D:V::::::E:::::::::::::::::::::::::L::I::ED:N::::::EA::: HQ1266A ::::::::T::::N::::::::::I::P:A:::::V::::::IPTEDI-:N:::TTAA:: NP1220A :::::A::::::::::T::::::::::V:::::::V:::L:I::S:A::EN::::EAT:: HVO_0684 ::::::Q:T::::::::::::::::::::::::::::::::::P::::D:::A:S::A:: Hbo0852 ::::::Q:T::::::::::::::::::::::::::::::::M:P::::::::::A:ET:A consensus AANRTEVKNISSHKGAEKALAYEVTRQKNAVQRGRAVEQETRHWDESRGITVSMRSKEEE #oth 21..1........11.12..11.32..213231.1111.....11.21.2..1.....1. VNG0345 :::::::::::::RA:Q::::::T:::R:QLE::M::A::::::::A::V:::::::::: hla0116 DV::A::::::::::::Q:::::::::E:VLR:::EI:::::::::A::V::::::::A: Hut0390 D:::::::::::::::Q::::::AQ::::::::::E:::::::::::::::::::::::: rrnAC1642 D::::::::::::::::Q::SF:AS::RKLI:S::::::::::FN:TH:N:::::::::: Hmu0858 :::::::::::::::::T:::F:AS:::KL::S::E:A:::::FN:TH:N::G::::::: HQ1266A S::::::::::::::::::::::::::R:::E::::I:::::::::::::::::::::A: NP1220A :::::::::::::::::::::::E:::::::::::E:::::::::::::::::::::::: HVO_0684 ::::::::::::::::::::::::::::::I::::::::::::::::::::::::::::: Hbo0852 ::::::::::::::::::::::::::::::IS::::I::::::::::::::::::::::: consensus KDYRYFREADLPPLEVSDWKEEIPIPELPDARRERFREEYGLDEESASKLTSTKQVADFF #oth ......1...1.1.3.11..2222.........1..22..2234.2.1...11.2...11 VNG0345 ::::::::::I:::::::::D::::::::::::::::T:::VGD:T::::::R:A:::L: hla0116 ::::::::::::A:::::::SQ:::::::::::::::::::::R::::::::::A::::: Hut0390 :::::::::::::::::H::::LS::::::::::::G:::::N::A:::::T:::::::Y rrnAC1642 ::::::::::::::R::H::D:V:::::::::::::V:::::S::A:::::::::::::: Hmu0858 ::::::::::::::R::H:::::D:::::::::D::VS::D:S::A:::::::::::::: HQ1266A ::::::P:::::::A:A:::DQ:S::::::::::::::::K::S:::A::::::A::::: NP1220A ::::::::::I:::R::::::K:D:::::::::::::::::::A:T:::::::::::::Y HVO_0684 ::::::::::::::Q:AH:::::::::::::::::::T:::I::::::::::::E::::: Hbo0852 ::::::::::::::::A::::K:D:::::::::::::::::::S::::::::::E::::Y consensus EDVADEFDPDLAATWVADNLLGELNYRDMEITDVEDRLDEFTRLVELVAADEITAKNAEE #oth .41.341114.1......11.......116221142.2..232.11..13212.2...3. VNG0345 :EL:::Y:AA:::::::::V::::::::LSLD::A::D:::E:::::::E:::::::::: hla0116 ::::EQ:::E:::::::::::::::::E:S:::::::::::K::I:::::::L:V::::: Hut0390 ::L:S::::::V::::::E:::::::::::::::T:::::IE:::::::SE:::::::R: rrnAC1642 ::::ER::AN:::::::::::::::::::A:::ID::F::V:Q::A:::E::::::::H: Hmu0858 :A::ER::A:::::::::E::::::::::L:::::::F::IE:::::::D::::::::K: HQ1266A :S:::Q:::A:::::::::::::::::::TVG:ID::F::::Q:I:::DDED::T::::: NP1220A :R:::T:A:E:::::::::::::::::::::::I:G:::::AH:I:::DE::::V::::: HVO_0684 ::::A:::A::::::::::::::::::::H::::S:::::::::::::::::V:T::::: Hbo0852 :::::K:::S:::::::::::::::::::Q::EITH::::::::::::D:GD::T::::: consensus VVLREMLDDGDDPDTIVDAEGLGKTDDDEVAAAVTEAIDENPDAVEDYHDGEGGAINFLV #oth 2...3...3254.23112311..3124112341.42..211.1..2..13.221.1.... VNG0345 ::::T:::EDRA::E::::::::::SG:A::D::A:::A::::::A:::::::D:L:::: hla0116 I:::::::A:E::E:VIER::::VA:SG:::::::A:::D:::::S:::::DE::::::: Hut0390 T:::G:::::::::::::R::::::QR::LQG::E:::E::::::S:::::G:::::::: rrnAC1642 T:::::::T::::::V::R::::::SG:::QQ::V::::::::::::::S:::::::::: Hmu0858 T:::::::E:::::A:::S::::::SG:A:QQ::EA::E::::::A::E::DD::::::: HQ1266A ::::R::::ELT:EAVIES::::RA:E:::VT:::G::::S:E::::::A:::::::::: NP1220A ::::R:::::QP:GD::E::D:::::::A::::::A::E::::::::::A::D::L:::: HVO_0684 I:::::::E:K::::::NEA::::A::::IGGF:Q::::::::::::::N:::::L:::: Hbo0852 ::::R:::::ES::D::E:::::AA:::::VT::::::E::::::::::A:::::::::: consensus GQVMQKTGGSADPGDVNQLLREELDG-- #oth ....3211.....14..31..22.2421 VNG0345 ::::A:::::::::Q::E:::D::AQA: hla0116 :::::A::::::::E::G:::::::::: Hut0390 :::::::::::::::::::::A::ED:: rrnAC1642 ::::E::::::::::::G::::::ES:: Hmu0858 ::::G::::::::::::::::A:::::: HQ1266A :::::::::::::SK::T::::Q:EDKK NP1220A :::::E::::::::T::E:::A:::::: HVO_0684 ::::::SQ::::::T:::::::R::E:: Hbo0852 ::::::::::::::::::M::D:::E::