|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2313 | VNG1901 | hla0996 | HQ3317A | HVO_2348 | Hbo2031 | NP2514A | rrnAC3309 | Hut2979 | Hmu2283 |
1820 | VNG1901 | 2330 | 1680 | 1623 | 1689 | 1716 | 1692 | 1633 | 1614 | 1675 |
1973 | hla0996 | 1680 | 2302 | 1716 | 1899 | 1832 | 1661 | 1716 | 1684 | 1694 |
1876 | HQ3317A | 1623 | 1716 | 2307 | 1881 | 1887 | 1614 | 1666 | 1600 | 1656 |
1988 | HVO_2348 | 1689 | 1899 | 1881 | 2297 | 2020 | 1693 | 1687 | 1645 | 1677 |
1992 | Hbo2031 | 1716 | 1832 | 1887 | 2020 | 2322 | 1742 | 1731 | 1652 | 1732 |
1885 | NP2514A | 1692 | 1661 | 1614 | 1693 | 1742 | 2353 | 1768 | 1807 | 1810 |
1925 | rrnAC3309 | 1633 | 1716 | 1666 | 1687 | 1731 | 1768 | 2308 | 1835 | 1844 |
1913 | Hut2979 | 1614 | 1684 | 1600 | 1645 | 1652 | 1807 | 1835 | 2578 | 1870 |
1924 | Hmu2283 | 1675 | 1694 | 1656 | 1677 | 1732 | 1810 | 1844 | 1870 | 2313 |
341 symbols consensus MSQQLPDVQASSPDVTVGLSRVGVTGVEKLVKIARDDKRPIVLMAEFEVFVDLPSGRKGI #oth ..2....1..24.1.2...12....1.1...114.5242.11...1.1.1....31...1 VNG1901 ::::::::::TE:::S::::E::::::::::E:::E:D:::::::::::Y::::R::::: hla0996 ::H::::::::A:::S::::Q::::::::::::::G:::::::::::::::::::::::: HQ3317A ::H::::I:::R::::::::Q::::D:D:::::E::GET:L::::::::::::::::::: HVO_2348 ::H::::::::Q::::::::Q:::::::::::::::G:::L:::::::::::::G::::: Hbo2031 ::H::::::::R::::::::Q::::::D::::::::G:::LI:::::::::::::::::: NP2514A :::::::::::::::S::::::::::::::::LH:PND:::::::::D:::::::W:::A rrnAC3309 :::::::::::::::::::N::::::::::::LG:R:RD::::::::::::::::W:::A Hut2979 ::K:::::::N::E:A:::N:::::::::::E:D:E:R:::::::T:D::::::TW:::A Hmu2283 :::::::::::::::::::N:::::::::::::D:A:Q:::::::T:::::::::W:::A consensus DMSRNMEVIDETLEAAVSEPAYRVEDVCGDAAERLLEKHDYTTTAEVRMEAELVTREDTP #oth .....1311..3..311333422..21..12..1.12..1..24.1.2.3.11141.3.. VNG1901 ::::::R:::::::D::R::I::::EM::EV::::::::::::::T:E:N:::ML::E:: hla0996 :::::LAT:::I::EITR:E:::::E:::::::::::::::::::::S:S:::::::::: HQ3317A ::::::Q:::::::::::GSVS::::M:::V::::::::E:::::T:E:T:D::MH:::: HVO_2348 ::::::Q::::V::::::::::::::M:::::::::A::E:::::::S:T::::V::::: Hbo2031 ::::::Q::::I::D::A::T:::::M:::T:::::A:::::SK:::::T::::L::::: NP2514A ::::::::V::M::E::::::LS:::::::V::::I:::::::Q::::::::YMI::E:: rrnAC3309 ::::::::::::::T::::E:::::::::::::L:::::::::K::::::::Y::H:S:: Hut2979 :::::::::::::::::DNTG:::::::::::::::D:::::DR::::::::Y::::R:: Hmu2283 :::::::::::::::::RDEVSG::A:::E::::::D::::::N::::::::Y::::E:: consensus ASELPTQSTADIIASATATEEG-TREEIGARVTGMTVCPCSQGMSASRARDVLADLDVDD #oth 11234..3.14.2...1.22122.1..1.12.2.........1.1221..32163.3122 VNG1901 ::D::::G:I::::::::Q:DAP:::::::::V:::::::::Q:MSET::RK::E:G:GE hla0996 ::GIE:::::T:V::::::::D::::::::E::::::::::::::E::::EK::::G::E HQ3317A :::::::N:IS:L::::::D::::::::::E:I:::::::::::::::::::MH:::IE: HVO_2348 ::G:S:::::E::::::::D::::::::::E:V::::::::::::::::::::Q::A::: Hbo2031 ::::Q:::::N:::::V:::D:::::::::E:V::::::::::::::::::::R::::E: NP2514A :TDR:::A::::::::::D:D:N::::::CH:V::::::::::::E:::::::EG::::R rrnAC3309 :::MA:::::::::::::::D:::S:::::::::::::::::::::::::ET:KQ:N:E: Hut2979 E:DR:::::::::::::::D:::::::L:::::::::::::::::E::::QT:N:::::R Hmu2283 :::R::::::::V:::::DA::::::::::::::::::::::::::A:::ET:RG::::: consensus ETIEEFLEEVPQPGHSQRGHATLTVETDGSPDVDLRDLIDVARDSMSARIYNLAKRPDED #oth 12223..251..1...........1224.3.111.422231..11...1...2....... VNG1901 DAVR:::RD:::A:::::::::::::AG:D:::N:M::VS::::::::::::T::::::: hla0996 ::T:::::A::::::::::::::::T:::H::I:::::::::::::::::::M::::::: HQ3317A ::::T:::Q::::::::::::::::TA::::::::IE:A:I:::A::::::::::::::: HVO_2348 D::::::DK::::::::::::::::::Q:::E:::M::::I::::::::::::::::::: Hbo2031 ::::::::Q::::::::::::::::::E:::::::I:IV:I::::::::::::::::::: NP2514A D::DA::::::::::::::::::::::S:D::::::T:::I::::::::::::::::::: rrnAC3309 DV::::::TN::A::::::::::::QS::A:E:::NE::E:::::::::::::::::::: Hut2979 :::DT::D::::A:::::::::::I:S::::::::::V:A::::A:::H::::::::::: Hmu2283 :::DS:::::::::::::::::::I:SE:A:::::L:V:E:::E:::::::::::::::: consensus HMTYEAHADAKFVEDCVRSMAEGVVEEFDHLPDDAVVRMKQSNDESIHQHNAHAERVATL #oth 1..111.21.........11.323234231.4211112.1................1142 VNG1901 :::::S::N::::::::::::R::::::::::E::::T::::::::::::::::::::EF hla0996 ::::::::::::::::::AL:::TI:::G::S::::IH::::::::::::::::::EV:M HQ3317A Y:::H:::::::::::::::::Q::NS:E::D::::::::::::::::::::::::EV:: HVO_2348 ::::H:::N:::::::::::::LSL:AL:::G:::::H::::::::::::::::::EV:: Hbo2031 ::::H:::N::::::::::::DQ:LT:::::A:::::H::::::::::::::::::::S: NP2514A :::F:S:S:::::::::::::N:LL::YPD::::TI:::E::::::::::::::::::EF rrnAC3309 :::::::K::::::::::AL:::::NT:PD:::::::T::::::::::::::::::::Q: Hut2979 :::::::::::::::::::L::::::T:PD::EN::I::E::::::::::::::::::RF Hmu2283 :::::S:KN::::::::::::::::DR:::::A::I:T:::::::::::::::::::::F consensus GDLRDEVDAD------------------------------- #oth 22.24.16453111111111111111111111111111111 VNG1901 :Q::E::GSGE:::::::::::::::::::::::::::::: hla0996 ::::::L::E::::::::::::::::::::::::::::::: HQ3317A EQ::A::S:S::::::::::::::::::::::::::::::: HVO_2348 :Q::::L::-::::::::::::::::::::::::::::::: Hbo2031 :E::::LEERD:::::::::::::::::::::::::::::: NP2514A :Q::R::RD-::::::::::::::::::::::::::::::: rrnAC3309 D:::Q::SE:::::::::::::::::::::::::::::::: Hut2979 :::T:::NG:AEGGNPEPADSGVAGTETDAVDRRTNGSGDR Hmu2283 :::EA:LAD::::::::::::::::::::::::::::::::