| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3172 | hla1945 | HQ2339A | HVO_1346 | Hbo0204 | VNG1275 | NP3742A | Hut1518 | rrnAC1169 | Hmu1458 |
| 2580 | hla1945 | 3297 | 2290 | 2425 | 2346 | 1512 | 2317 | 2222 | 1514 | 2365 |
| 2531 | HQ2339A | 2290 | 4154 | 2471 | 2528 | 1439 | 2227 | 2220 | 1525 | 2304 |
| 2708 | HVO_1346 | 2425 | 2471 | 3185 | 2689 | 1549 | 2371 | 2277 | 1600 | 2419 |
| 2670 | Hbo0204 | 2346 | 2528 | 2689 | 3322 | 1443 | 2383 | 2281 | 1585 | 2387 |
| 1709 | VNG1275 | 1512 | 1439 | 1549 | 1443 | 2117 | 1631 | 1621 | 1606 | 1579 |
| 2694 | NP3742A | 2317 | 2227 | 2371 | 2383 | 1631 | 3242 | 2490 | 1746 | 2591 |
| 2580 | Hut1518 | 2222 | 2220 | 2277 | 2281 | 1621 | 2490 | 3243 | 1737 | 2504 |
| 1836 | rrnAC1169 | 1514 | 1525 | 1600 | 1585 | 1606 | 1746 | 1737 | 2132 | 1807 |
| 2765 | Hmu1458 | 2365 | 2304 | 2419 | 2387 | 1579 | 2591 | 2504 | 1807 | 3214 |
577 symbols consensus ----------------T-SRAVVAKRVDSGS-ADLTEITDLARAAGYDVVGELTQTRTED #oth 111111111122344647652222211352622124115311311113243222131311 hla1945 MTGSVEGRDTDTEPTAAER::::::::E:::::::::::Q::A::::::::::::::::: HQ2339A :::::::::::::::M:I:PVI::Q:::PNAV:::S::A::::::::::SNT:::S:E:: HVO_1346 ::::::::::::::::-M::V:::::::R:D:::::::S::::::::E:::::::::E:: Hbo0204 ::::::::::::::MSDGTN:I:::::N::ES:::S:::::::::::E:::T:S:S:K:: VNG1275 ::::::::::::::::-:-------------:---------------------------- NP3742A :::::::::::::MTG:NGT::::::::D:H:P:TA::R:::A::::T:A::V::::::: Hut1518 ::::::::::VTGTDRPTDG:I:V::::E:::::T:::KR::D::::::LAT:::::::: rrnAC1169 ::::::::::::::::-:-------------:---------------------------- Hmu1458 :::::::::::VTAST:AE:::I:::::::T:::TE:::::::::::EA:::V::K:::: consensus AAFHFGEGKVAELADLVARTDATAVIFDNRLGPYQTYNIGGELPEGVEVIDRFTLILEIF #oth 213331111343236323532153123114211111212243214232231114111211 hla1945 :::M:::::::::R:::R::::N:::I::DV:::::F::::::::::::::::A:::::: HQ2339A ::Y::::::IEA::R::KQ:::E:::V::::::::::::::K::T::::::::::::::: HVO_1346 ::::::::::G:::S::::E::V::V:::::::::::::AQK::DDA::::::::::::: Hbo0204 ::::::::::D::TA:::E:::A:::V::::::::::::::K:::::::::::::::::: VNG1275 ------------------------------------------------------------ NP3742A P:LCL:::::::::::::D:G::T:V::::::::::::L:NN::K:T::V:::K:::D:: Hut1518 P:Y:V::::A::I:EELRAR:::V:::::Q::::::::L:T:F::::QLL:::R:::::: rrnAC1169 ------------------------------------------------------------ Hmu1458 P:Y:L::::::R::NV:::EG::::::::E::::::::::N:::D::Q:V:::R:::::: consensus GQRANTRKAQLQVELAELRYELPRAEAKASLAKRDERPGFMGLGEYDESREQDIKAQISR #oth 1111212111111111111111112111211121212111.........1.2...41..2 hla1945 :::::::::::::::::::::::::::::::::::::::::::::::::V:R:::R:::E HQ2339A ::::::::::::::::::::::::V:::S::::::::::::::::::::::R:::S:::: HVO_1346 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0204 :::::::::::::::::::::::::::::::::::::::::::::::::::::::N:::: VNG1275 ----------------------------------------::::::::::::::::R::: NP3742A ::::Q:K::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1518 ::::Q:::::::::::::::::::::::::::R:E:H::::::::::::::::::NR::: rrnAC1169 ----------------------------------------:::::::::::E:::K:::N Hmu1458 ::::Q::::::::::::::::::::::::::::::::::::::::::::::E:::K:::: consensus IRDELDSIEETEEHRREQRRESGFDLVALAGYTNAGKSTLLRRLAADLDVDENEDLHPDL #oth .22..34.141123..11..1...................11.1.2122121.332.... hla1945 :::::A::A:K::A::::::D:::::::::::::::::::M:::::EI:::::AER:::: HQ2339A :SQ:::A:A:K:QT:::::::::::::::::::::::::::::::D:::IT::KNR:::: HVO_1346 :KN:::A:ADK::T::::::::::::::::::::::::::MQ::::::E:GQ:DE::::: Hbo0204 :KN:::::A:K::T::::::::::::::::::::::::::M::::E::E:G::::::::: VNG1275 :::::SN::K::QQ:::T:::::::::::::::::::::::::::::VA::::D:R:::: NP3742A :::::ER::Q:::::::::::::::::::::::::::::::::::::V:I::::G::::: Hut1518 :::::EK::R:D:::::::::::::::::::::::::::::::::E:::::::::V:::: rrnAC1169 :::::E::::::R::::::::::::::::::::::::::::::::D:::::::D:::::: Hmu1458 :::::A::::::Q:::Q::::::::::::::::::::::::::V:D:V::::::E::::: consensus DPTAESEDRLFTTLGTTTRRADTGRRDVLLTDTVGFISDLPHWLVESFKSTLDSVYRADL #oth 14....1.3...........11433.1..1......12..........1...32..2... hla1945 :T::::Q:M::::::::::::EMEK::::::::::::A::::::::::E::::::::::: HQ2339A EQ::::::::::::::::::::::::::::::::::V:::::::::::E::::::::::: HVO_1346 ::::::Q:K::::::::::::E::K:::::::::::V::::::::::::::::::::::: Hbo0204 ::::::::::::::::::::::::T:::::::::::V::::::::::::::::::::::: VNG1275 :T::::Q:D:::::::::::MELA::::::::::::::::::::::::::::E:::Q::: NP3742A :A::::::::::::::::::::FD:::::V::::::::::::::::::::::SE:::::: Hut1518 :E::::::::::::::::::::FD:::::V::::::::::::::::::::::G:::Q::: rrnAC1169 :T:::::::::::::::::::EV:K:E::V:::::::Q::::::::::::::G:::H::: Hmu1458 ::::::::::::::::::::::MDQ::::V:::::::::::::::::::::::A:::::: consensus VLLVVDASEPVEEIREKLVTSHDTLYERNEAPIVTVLNKTDRVDDAELERKRAALSALAP #oth ......1111224111..2.2...........11..1..2.412331242.131.321.. hla1945 ::::::::::::TM::::::::::::::::::V:::F::V::LAPG::AD::::::GV:: HQ2339A :::::::::SIDAM::::I::::::::::::::::::::::C:EEG::D::MQS:D:::: HVO_1346 :::::::::::::M::::::::::::::::::::::F::V:K:EAE:::E:::::::::: Hbo0204 :::::::::::::M:D::::C::::::::::::::::::I:K::AD::G::MD::Q:::: VNG1275 ::::::::::LAD:Q:::A:::::::::::::::::F::::::E::A:AE:ME::A:::: NP3742A ::::::V:D:::::::::::C::::::::::::::::::I:::::E::::::E::::::: Hut1518 ::::::VG:S::S:::::::A::::::::::::L:::::I:T:EA:::D:::E::::::: rrnAC1169 ::::::V::S:::::::::::::::::::::::::::::::M:::E:VR:::D:::S::: Hmu1458 ::::::V::::::::::::::::::::::::::::::::::T:::::I::::::::G::: consensus NPVAVSALTGENVDALRDRIDAELPDWERERLVLPMTDDTMSLVSWIHDHAHVENVDY-- #oth 3.12..133231234.32.1262..3333...11.12111..2...211.12.3413.31 hla1945 D::::::K:SAG:AE::::VE::::::::::::::LS::A::::::::::G:::AET:A: HQ2339A ::::::G:::::IEQ:TN::EN:::S:HD:::L::LS::A::::::LYN:G::::EE:TD HVO_1346 ::::::G::::::EE:A::VEG:::A:K::::L:::A:::::::::LY::::::AEE:E: Hbo0204 :::S::G::::::G::A:::ER:::::RE:::L:::S:::::::::LY::GN:K:EA:E: VNG1275 A::::::RDAS:LEE::E::::A::AR::::::::::E::::V:::V::::::RT::::: NP3742A E:IV:::K::::::S::E:::E:::::R:::::V::::::::F:::V:::G::DS::::: Hut1518 :::::::R:::::::::E:::ES::EL:H::::::::::A::V:::::::::::D::::: rrnAC1169 :::::::EQ:L:I:D:AE:::H::::Y::::::::::::::::::::::::S::T::::: Hmu1458 ::I::::KE:A:::::L:::HD::::Y:::::::::::E::::::::::::::D:::::: consensus -GD-QVVIEFEARPAIVERARAKAADLVAASA---------------------------- #oth 11113.421.1111211221111.221534436412212222222221111111111111 hla1945 :D::::TLD:::K:S::A:::S:::G:AP:GST::::::::::::::::::::::::::: HQ2339A T:::A:L:::S::ST::K:::::::E:EES:SKGASDESANTHDSNGVNTKTQAQLSERR HVO_1346 ::E:::HV::::::::::K::::::::S:PTDSA:::::::::::::::::::::::::: Hbo0204 ::E:N:LV::::::::::K::::::EVQ:GTDGEAEAEAEPDGGYQT::::::::::::: VNG1275 :::QE:::D:::::T::::SH:::S::::EA-:::::::::::::::::::::::::::: NP3742A ::::E:I:D:::::::I:Q:::R:SE:P::A:E::::::::::::::::::::::::::: Hut1518 ::E:E::V:::G:::V::QS::::S:::P:ESAS:::::::::::::::::::::::::: rrnAC1169 ::::::::::::::::I:QS::::G:::G::::::::::::::::::::::::::::::: Hmu1458 ::::::IV:::G:S:V:::S::::GE::E::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 hla1945 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2339A HDNEIMESESNPERMDTASDRESTSYEESDTTHQVASDSPPDRMSDSTREIHRNNPSQVT HVO_1346 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0204 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG1275 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3742A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1518 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1169 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1458 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------- #oth 1111111111111111111111111111111111111 hla1945 ::::::::::::::::::::::::::::::::::::: HQ2339A EDDVTQEDHIDAVDIDVNYPLMNEKNSSDTDTNSKAE HVO_1346 ::::::::::::::::::::::::::::::::::::: Hbo0204 ::::::::::::::::::::::::::::::::::::: VNG1275 ::::::::::::::::::::::::::::::::::::: NP3742A ::::::::::::::::::::::::::::::::::::: Hut1518 ::::::::::::::::::::::::::::::::::::: rrnAC1169 ::::::::::::::::::::::::::::::::::::: Hmu1458 :::::::::::::::::::::::::::::::::::::