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[R] (-) COG1202 Superfamily II helicase, archaea-specific
9 genomes BUD0613 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG2173

rrnAC2756

HVO_0283

Hbo1200

Hmu2832

Hut2659

hla0462

NP5144A

HQ3065A

Pairwise sequence scores
Consensus score5144 VNG2173 hla0462 HVO_0283 Hbo1200 HQ3065A NP5144A Hut2659 rrnAC2756 Hmu2832
3549VNG2173 4475 3291 3284 3388 3232 3282 3236 3281 3276
4176hla0462 3291 5174 3868 3932 3871 3856 3679 3393 3770
4195HVO_0283 3284 3868 5151 4118 3830 3725 3609 3254 3787
4446Hbo1200 3388 3932 4118 5184 4212 3954 3733 3385 3984
4258HQ3065A 3232 3871 3830 4212 5164 3804 3682 3353 3849
4336NP5144A 3282 3856 3725 3954 3804 5064 3854 3465 3883
4240Hut2659 3236 3679 3609 3733 3682 3854 5216 3583 4158
3804rrnAC2756 3281 3393 3254 3385 3353 3465 3583 4451 3787
4422Hmu2832 3276 3770 3787 3984 3849 3883 4158 3787 5249

704 symbols
consensus       VSQQVARVDTLFLHETGDDYAVVVRRDGERVFRGRLELKETSAGPRPARFRVKRGDEEDP
#oth            213124423111212544225112311141324241122214111114222232345252
VNG2173         ------------------------------------------------------------
hla0462         ::::L:E:E::::::ARS::T::AT:::N:IL:::::::::::::::GK:::I:DG:DH:
HVO_0283        ::K::T::::::::Q:::::L::A::::K::L::K::::::N:::::L::L:T:KG:DS:
Hbo1200         ::K::G:I::::V:::N:::L:::Q::::::::AV:::Q::N::::::K::::::SN:E:
HQ3065A         M:R::S:::::::::R:E:F::::::::G:::Q:T::::Q::::::::K:::::::S:E:
NP5144A         M:K:::D:G:::::::DGE::::A::::::L::::::::::::::::G:::::D::DDV:
Hut2659         :::::TQ::::::::D:E:FQ:::Q::::::LD::::V:::E:::::::L:I:::SQ::L
rrnAC2756       ------------------------------------------------------------
Hmu2832         :::::::::::::::H::::R:::::::G:::H:V::::Q:D:::::R:L:I:::AS::L

consensus       RDPSQFVELARRAGRIRISEQTSKAGRDELREMLDGYQLEAKVVRTCRYCASNGRYSPIT
#oth            241431122114151112121125531643521.11..13.23.....3..34.1.1.1.
VNG2173         --------------------------------:::A:::A:::::::::::GR:::::L:
hla0462         :Q:GE::D:::A:::::::::::PKN:KR:QA:::::::::MA:::::R::ND:::G:::
HVO_0283        :::::::::::S:A:::::Q::P:D:::::K::::::::::LT:::::R::V::::::::
Hbo1200         :::::::::::::E:::::Q:::::R:::F:::::::::D:L::::::::::::::::::
HQ3065A         Q:::S::DI::E:S:::::Q:::PPN:TA:S:L::::::D:L::::::::::::::::::
NP5144A         :R:E:::::::::T:::::::::R:::A::EA:::::::D::Q::::::::G::::::L:
Hut2659         :S:D:::::::::::::V:::::AR::RVV::L::A::::::::::::F:::A:K:::::
rrnAC2756       --------------------------------:::A::V:::::::::L:::D:::::::
Hmu2832         :S:D:::::::::S:::::::::GR::E:::A::K::::S::::::::::::S:::::::

consensus       SETAIEADDEHICPDCARRELERELAFS---GAITGAAQDRLEELLLEVQDLDRITNLLS
#oth            311..3224.5..12..331.11.1325111.65113.23...1..4231..32142..3
VNG2173         A:::::::G:F::R:::VE::::::S:::::::VS:::::::::::FAE:::EKV:G::G
hla0462         :DG:::HN::L::R:::::::::::SYK::::EF::::EE::::::Y:SG:::::V:::Q
HVO_0283        DD:::K:EH::::R:::VQ:::G::S:A::::GL:Q:::E::::::Y:TG::T::::::Q
Hbo1200         ED:::K::N:Y::::::K:::::::D:::GT::M:Q:::E:::S::::T:::G::S:::K
HQ3065A         D::::AT:R:Y::::::K:::::::D::TGT:RL:::::Q::::::I:T:::::::D:::
NP5144A         ::::::::N::::::::K::::::ANYR::::LRS:-:R:::::::V::G::ESVI::::
Hut2659         :::::D::G:D:::S::IT:::::::YH::::DV::T:R::::::::D::::E::V::::
rrnAC2756       ::::::T:::T:::E:::QQ:D:::::K::::S:S:D:R:::::::::::::::V:::::
Hmu2832         :::::K::::::::::::E::D::::LN::::G:::D::A:::::::D:::::::E::::

consensus       GELDPDLTKFDEISATTDDIDLVRTDTLDLHPGLQSHLEGRFDTLLPVQSLAVENGLLDG
#oth            .3...1..11.11..1111121.4143.11..432433262.11.......1131.2311
VNG2173         :::::::::Y::V::::::V:P:AVSE:::::DV:GLF:D::EE:::::::::::::VE:
hla0462         :G:::::::Y::V::NV:::SP:::ED:::::D:SA::Q:::EE:::::::S:R::::::
HVO_0283        :::::::::::T:::::E:VE::E:N::::::N:K:M:TE::::::::::::ID::::::
Hbo1200         :G:::::::::TV::::::::::S:S::::::A:::MV:N::E::::::::::::::F:E
HQ3065A         :G::::::R::TV:::::EV:::E:T::::::K::EL::A:::::::::::::N:::F::
NP5144A         :D:::E:::::::::::::::::S:::::V::K::::IQ--::E::::::::::::::E:
Hut2659         :::::E::::::::::VE:::::P::S:S::::M:QK:::Q::E::::::::::::VT::
rrnAC2756       :Q::::::::::::::V:EV:P::V:S::::::M:E:::S::::::::::::::H:ATE:
Hmu2832         ::::::::::::::::V::::::PV:S::::::I:Q::::::::::::::::::::AT::

consensus       RDQLVVSATATGKTLVGELAGIDRVLNGDGKMLFLVPLVALANQKHEDFQERYGDLLDVT
#oth            4..1...........1..2..22.31333.11.............112.422..144211
VNG2173         D::M::::::::::::::I::LH:LQS:N::L::::::::::::::::::DE::H:AN::
hla0462         T:::::::::::::::::::::::A:K::::L:::::::::::::::::KD::::R:N:S
HVO_0283        D:::::::::::::::::::::N:M::D:::::::::::::::::::::K::::H:GK::
Hbo1200         :::::::::::::::::::::VN:A::::::::::::::::::::::::E:::::H:N::
HQ3065A         H::::::::::::::I:::::VN:::TEG::L:::::::::::::::::T::::::I:::
NP5144A         ::::::::::::::::::::::::A:S::::L:::::::::::::::::E:D:::I::I:
Hut2659         Q::::::::::::::I::M:::::::::K::::::::::::::::YQ:::AE:::IA::S
rrnAC2756       :::::::::::::::I::M::::::::NK:T::::::::::::::Y:Q::D::::MV::S
Hmu2832         :::::::::::::::I::M::L:::::NK::::::::::::::::Y:S:A:::::MV::S

consensus       IRVGASRIRDDGNRFDPNADVIVGTYEGIDHALRTGKDLGDIGTVVIDEVHTLKEGERGH
#oth            1...1..1311122...5..1.............112...111.1......1.1121...
VNG2173         ::::S:::::::HA:::A::I:::::::::::::::R::::::::::::::::::DD:::
hla0462         ::::S::VN:::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_0283        ::::::::N::::::::::::::::::::::::::::::::::::::::::::::E::::
Hbo1200         ::::::::N:::::::::::I:::::::::::::::::::::A:::::::::::::::::
HQ3065A         ::::::::A::T:::::D::I::::::::::::::D::::::::I:::::::::::::::
NP5144A         L::::::::::::::::G:::::::::::::::::::::::::::::::::N:GAD::::
Hut2659         L:::S::::G::GG:::S::I:::::::::::::V:H::::::::::::::::G::::::
rrnAC2756       L:::::::A:E:G::::E::::::::::::::::::::::TV:::::::::::G:D::::
Hmu2832         L:::S:::DG:::::::::::::::::::::::::::::::::::::::::::G::::::

consensus       RLDGLISRLKYYCE------TRANRREGYDG-----------TQWIYLSATVGNPGSLAE
#oth            ....111...1.1221211143667472331212222211121.21........136..3
VNG2173         ::::::::::::::::::::Q:REE:A:::::::::::::::A::V::::::::::E::G
hla0462         ::::::::::::S:::::::N:METH:::G::::::::::::::FV:::::::::EW:::
HVO_0283        ::::M:A:::H:::::::::S::D:::::G::::::::::::A::::::::::::KW::Q
Hbo1200         ::::M:::::H:::::::::::EKQ:NS::::::::::::::A::V:::::::::EM::Q
HQ3065A         :::::::::::::A::::::::::H:R:::::::::::::::A:S::::::::::ET:::
NP5144A         :::::V::::H::R:::::::NQCD------::::::::::::::V::::::::A:::::
Hut2659         ::::::::::::::SGGKTAA:S::SG:RG:SASSSQSG::D:::::::::::::::::D
rrnAC2756       ::::::::::::::::::::SGGAPDS:D--:::::::::::::::::::::::::Q::D
Hmu2832         ::::::::::::::QGE::::VEQS:K:RT:DAREQNVGLDG::::::::::::ASD:::

consensus       KLRATLIEFEERPVPIERHVTFADGREKPDIENKLVRRAFDTKSSKGYRGQTIIFTNSRR
#oth            4.313.1.1.1..1..1.......23..531322.1111..31..1.......1......
VNG2173         ::::N:V::::::::::::::::::A:::::::T::::E::QE::M::::::::::::::
hla0462         ::::::::Y:::::::::::::::S:::AQ:AD:::K:E:::::::::::::::::::::
HVO_0283        N:::N:V:Y:D::::::::::::::Q:::R:::R:::Q:::S::::::::::::::::::
Hbo1200         :::::::::::::::::::::::::::::::I::::::E::::::::::::::V::::::
HQ3065A         R:QT:::::::::I::D:::::::::::V::T::::::E::::::::::::::V::::::
NP5144A         S:G:Q:::::::::::::::::::D:::L:::D:::K::::::::::::::::V::::::
Hut2659         S:S:K:::::::::::::::::::DY::V::::::AK:::::::::::::::::::::::
rrnAC2756       Q:::::::::::::::::::::::::::IET:K:::K::::N::::::::::::::::::
Hmu2832         ::::N:V::::::::::::::::::Q::TR::::::::::::::::::::::::::::::

consensus       RCHEISRKLEYDSAPYHAGLDYGRRKRVERQFGNQDLAAVVTTAALAAGVDFPASQVIFD
#oth            ..11.1.214.3111......133.33..23.11.1.1................1..1..
VNG2173         ::N::::::D:P:R:::::::::E::S::::::D::::::::::::::::::::N:::::
hla0462         :::::::::R::::::::::::K:::K::::::::::S::::::::::::::::::::::
HVO_0283        :::::A::MD:NA:A::::::::Q::::::::A:::::::::::::::::::::::::::
Hbo1200         :::::A::::::A:::::::::::::K:::M::::::::::::::::::::::::::V::
HQ3065A         :::::::::S:S::::::::::NQ::::::D::::::::::::::::::::::::::V::
NP5144A         :::::::Q:A::::A::::::::E::::::::::::::::::::::::::::::::::::
Hut2659         :::::::R:::S:::::::::NK::GE::SL:AD:E::::::::::::::::::::::::
rrnAC2756       :::Q:::::::S:::::::::NRK:Q::::::AD::::::::::::::::::::::::::
Hmu2832         :::::::::::::::::::::NK::H:::Q::AD:::::::::::::::::::::::V::

consensus       SLAMGIEWLSVQEFSQMLGRAGRPDYHDKGTVYLLVEPDGSYHNSMEMTEDEVAFKLLKG
#oth            1........1....1.............2.3..2.....22..111121.1.1..1....
VNG2173         T:::::::::::::E:::::::::::::R:K::V:::::A:::S:::G::E:I::T::::
hla0462         ::::::::::::::::::::::::::::R:R:::::::::V:::::DR:::::::T::::
HVO_0283        T:::::::::::::::::::::::::::::V::::::::A::::T:::::::::::::::
Hbo1200         T:::::::::::::E::::::::::::::::::::::::C::::::::::::::::::::
HQ3065A         ::::::::::::::E:::::::::::::E:::::::::::A:::::DR:::::::T::::
NP5144A         ::::::::::::::E:::::::::::::::::::::::::A:::::::::::::::::::
Hut2659         :::::::::T::::::::::::::::::::::::::::::V::::Q::::::::::::::
rrnAC2756       :::::::::T:::::::::::::::::::::::M:::::C::::::::::::::::::::
Hmu2832         :::::::::::::::::::::::::::::::::::::::C::::::::S:::::::::::

consensus       EMEPVITRYDESAAVEETLANVVVAGKAAKRLNDRMIGEVPTKHAVGKLLEYEFIDGLEP
#oth            1..3.514..141.2......12.1.33..2..2..2.12..11.2....212....13.
VNG2173         D::N:V:H:::D::::::::::T:G:T:::::::::V:DI:::::L::::::::::::::
hla0462         :::D:A:H:::T:::::::::::::::K:::::::::::::::::::::::WK::::FS:
HVO_0283        :::E:R:V::Q:S::::::::I::::TK::A::N::L::L::T::::::::WG:::::D:
Hbo1200         :::D:M:V::::::A:::::::I::::K::::::::::D::::::::::::W:::::FD:
HQ3065A         :::D:M:I::::::A::::::::::::Y::Q::E:::::::::R:::::::W::::::T:
NP5144A         :::::V:::::T::I::::::::::::::::::E::V:D:::::::::::K:::::::::
Hut2659         :::::TN::::::::::::::I::G:S:::::::::L::::::::I::::::::::::::
rrnAC2756       :::::::::::G::::::::::T::::Q::::::::V::::::::L::::::::::::S:
Hmu2832         D::::::E:::A::::::::::T:::DQ:::::::::::::::::L::::Q:::::::::

consensus       TPLGRAVTRHFLAPDEAFAILDGIRKGLDPYEIVAEMELRDEE-
#oth            .11.211122..3.241.62..21.2264.2411.23.132334
VNG2173         :DR:::::T:::D::S::R::::V:::HA:GR:I:TL:::EDDQ
hla0462         :::::GI:::::::::::FM::A::::T:::Q:::DL::::D:E
HVO_0283        ::::L::::Q::S:K::::::::::::SS::K:::DL::DE:GR
Hbo1200         ::::Q::C::::::KD::R::::::Q::S:::L::::::AEDDL
HQ3065A         :::::::C::::S:QD::ML::Q::NNV:::::I:T:::E:N::
NP5144A         ::::Q:I:E:::K:::::VL::A::::TP:::L:::I:::G:::
Hut2659         ::::::::::::S::R::LL:::::::R::FD::::V:FA:::L
rrnAC2756       ::::::::::::::::S:QL:::::::QH::::::D::::::H:
Hmu2832         :::::::::F:::::Q::::::::::D:H::D:::::::::R::