|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3550 | Hut2140 | VNG2138 | NP1032A | hla0255 | rrnAC3160 | Hmu2591 | HQ3243A | HVO_0317 | Hbo1164 |
3050 | Hut2140 | 3565 | 2914 | 2934 | 2893 | 2998 | 2946 | 2876 | 2944 | 2977 |
3178 | VNG2138 | 2914 | 3564 | 3006 | 2984 | 3073 | 3038 | 3081 | 3054 | 3147 |
3200 | NP1032A | 2934 | 3006 | 3545 | 3003 | 3039 | 3125 | 3013 | 3055 | 3056 |
3239 | hla0255 | 2893 | 2984 | 3003 | 3572 | 3098 | 3063 | 3089 | 3097 | 3134 |
3312 | rrnAC3160 | 2998 | 3073 | 3039 | 3098 | 3546 | 3250 | 3094 | 3101 | 3174 |
3271 | Hmu2591 | 2946 | 3038 | 3125 | 3063 | 3250 | 3557 | 3086 | 3074 | 3135 |
3274 | HQ3243A | 2876 | 3081 | 3013 | 3089 | 3094 | 3086 | 3570 | 3123 | 3202 |
3289 | HVO_0317 | 2944 | 3054 | 3055 | 3097 | 3101 | 3074 | 3123 | 3528 | 3218 |
3333 | Hbo1164 | 2977 | 3147 | 3056 | 3134 | 3174 | 3135 | 3202 | 3218 | 3562 |
477 symbols consensus -MKEYQTITEISGPLVFAEVDEPIGYDEIVEIETPDGETRRGQVLESSSGLVAIQVFEGT #oth 12...2.11.1....111.1..11...11...1233.122.......3224.......1. Hut2140 ::::::::::V::::::V:T:::::::::::::VG::D:::::::::T:DH:::::::S: VNG2138 ::::::::::V:::::YV:T:::::::::::::::N:DVK::::::::D:F::::::::: NP1032A MQ:::K:::::::::::::::::V::::M::::::S:::::::::::T:EF::::::::: hla0255 ::::::::::::::::Y:::::A:::::::::::AQ:::L::::::::E:V::::::::: rrnAC3160 :::::::::::::::::V:T:::V:::D:::::LS::::::::::::A:DY::::::::: Hmu2591 MK:::E:::::::::::::::::V::::::::D:G::DV::::::::T:DY::::::::: HQ3243A :::::::V:::::::IY::::::::::::::::::N:DIK:::::::ED::::::::::: HVO_0317 :::::::::::::::::::::::::::::::::::Q:::K::::::::E::::::::::: Hbo1164 ::::::::S::::::::::::::::::::::::::Q:::K::::::::D:V::::::::: consensus SGIDRNASVRFLGETMKMPVTEDLLGRVLDGSGQPIDGGPEIVPDERRDIVGAAINPYSR #oth 3.11322....1...11.11..1.....11.1.4...1..1.2112131...2....31. Hut2140 Q::::EC::::::::::::::::::::::::T:R::::::D:::EQ:Q:::::::::F:: VNG2138 E:VGKD:::::::::L:::::::::::::::::N::::::D::::D:V::::E::::HA: NP1032A ::::::S::::::::LQ::L::E::::::S:::E::::::::E:::E:E::::::::TA: hla0255 ::::Q::::::::::::::::::::::::::::R:::D::::::E::Q:::::::::::: rrnAC3160 E::::D::::::::::::::::::::::M::T::::::::::::::::::::E::::F:: Hmu2591 T:::::S:::::::::::KL:::::::::S:::D::::::::E:::::::::K::::::: HQ3243A ::::T::::::S:::L::K:::::::::::::::::::::::LA::::E:::::::::A: HVO_0317 :::::::::::::::L:::::::::::::::::::::::::::::::::::::::::::: Hbo1164 T:::K::::::::::::::::::::::::::::::::::::::::D:H:::::::::::: consensus EYPEEFIQTGVSAIDGMNTLVRGQKLPIFSASGLPHNDLALQIARQASVPEE--EDGDDD #oth ...1...1..1111......1......1..2..1..12..1......2...112254232 Hut2140 :::R::::::I::::::::::::::::L::G::::::E:::::::::E::::::---::: VNG2138 ::::::::::::G:::::::::::::::::G:::::S::::::::::::::::EAET::: NP1032A ::::::::::::::::::::I:::::::::G::::::E:::::::::::::::::S:::E hla0255 :::::::E::::::::::::::::::::::S::Q::SQ::M::::::::::::E:G:::E rrnAC3160 :::::::::::::::::::::::::::::::::::::::::::::::T:::::::::E:: Hmu2591 ::::::::::::G::::::::::::::::::::::::::::::::::::::::::E:::: HQ3243A :::::::::::A:V::::::::::::::::G::::::E:::::::::T::::ENA:DNE: HVO_0317 :::::::::::::::::::::::::::::::::::::::::::::::T:::D::--EESG Hbo1164 :::::::::::A:V:::::::::::::::::::::::::::::::::T::::::AAEEGE consensus EGSEFAVIFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALTTA #oth 21.....1.1.....1.......2..............1...........2...11.... Hut2140 :E:::::::A::::::::::::::::::::::::::::::::::::::::I:::L::::: VNG2138 :::::::V:::::::::::::::::::::::::::::::::::::::::::::::::::: NP1032A A::::::::::::::Q:::::::::::::::::::::::::::::::::::::::::::: hla0255 :::::::::::::::::::::::Q:::::::::::::::::::::::::::::::V:::: rrnAC3160 ::::::::::::::::::::::::::::::::::::::::::::::::::I:::L::::: Hmu2591 :::::::::::::::Q::::::::::::::::::::::::::::::::::L:::L::::: HQ3243A D::::::::::::::::::::::E:::::::::::::::::::::::::::::::V:::: HVO_0317 :E:::::V:::::::Q:::::::E::::::::::::::T:::::::::::::::L::::: Hbo1164 :::::::V:::::::::::::::::::::::::::::::::::::::::::::::::::: consensus EYLAFEKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIE #oth .....111....1.1...........1.......................2........1 Hut2140 :::::::G::::T:M:::::::::::::::::::::::::::::::::::N::::::::: VNG2138 ::::::::::::::::::::::::::Q::::::::::::::::::::::::::::::::: NP1032A ::::::EG:::::::::::::::::::::::::::::::::::::::::::::::::::: hla0255 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::Q rrnAC3160 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2591 :::::D:G:::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3243A ::::::::::::::::::::::::::::::::::::::::::::::::::T::::::::: HVO_0317 :::::D:::::::::::::::::::::::::::::::::::::::::::::::::::::Q Hbo1164 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus GREGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIYIDRDLNSQGIQPPINVLPSLSRLM #oth .21..1..1......1...................12112.1...23..11111...... Hut2140 :V:::I:::::::::S::::::::::::::::::::V::G:::::VR:::Y:PT:::::: VNG2138 :K:::::::::::::::::::::::::::::::::MMN:::::::VT::V:::::::::: NP1032A :::::::::::::::::::::::::::::::::::::::N::::::E::::::::::::: hla0255 ::D:::::::::::::::::::::::::::::::::V:P::::::L:::::::::::::: rrnAC3160 ::::::::L::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2591 ::::::::::::::::::::::::::::::::::::::::::::::E::::::::::::: HQ3243A ::::::::::::::::::::::::::::::::::::V::::::::V:::V:::::::::: HVO_0317 ::D:::::::::::::::::::::::::::::::::::::::::::R::::P:::::::: Hbo1164 ::::::::::::::::::::::::::::::::::::V::::H:::V:::V:::::::::: consensus DDGIGEGLTREDHADVSDQMYAAYAEGEDLRDLVNIVGREALSERDNKYLDFADRFEAEF #oth .1.....1..2..2..21.31.....1.1..............11..1....111..4.. Hut2140 :E:::::::::::G::QS:L::::::A:::::::::::::::::::::::::G::::S:: VNG2138 ::::::::::A::G:::::L::::::::E::::::::::::::::::R:::::::::::: NP1032A :::::::F:::::P:::::A:::::::::::::::::::::::::::::::::::::E:: hla0255 ::::::::::::::::K:::F:::::::::::::::::::::::L:::::::::D::S:: rrnAC3160 ::::::::::A:::::K::IF:::::::::::::::::::::::L::::::::::::E:: Hmu2591 ::::::::::V:::::K::IF::::::::::::::::::::::DL::::::::::::T:: HQ3243A :::::::::::::::::::::::::::::::::::::::::::D:::::::::::::T:: HVO_0317 :::::::::::::::::::::::::::::::::::::::::::::::::::::E:::::: Hbo1164 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::D:: consensus VDQGFDTNRSIDETLEIGWDLLSMLPKDELNRIDEELIEEYYRED---ETAEATAD- #oth 12..3222.1122..111.1...21.231...1..12.131.312334344253131 Hut2140 ::::Y::A::::Q::D:A:::::D::RE::::::::F::T::D:GSDATVEA:E::D VNG2138 I::::K:::D:E:::DL::E::::F::T::::V::D:::DH:V:::::VAD:::::: NP1032A :Q::Y::::DVE:::DLA:E:::D:::E::::::::A:::::V::::::Q:AQ:::: hla0255 ::::::Q::::E::::::::::::::::A:::::::F::K:::::DSDRQVVEA::: rrnAC3160 ::::T::A::::::::L:::::::::::A::::::D::::H:::::::::::TVEA: Hmu2591 ::::I::D::::::::L:::::::::::A:::::::::::H:::::::::Q:V:::: HQ3243A I::::EV::::N::::::::::::::::::::V::D:::K::::ENAG::::IA:E: HVO_0317 :N:::::D:::ED::D:::::::T:::S:::::::::::D::ED:::A:SV::E:-: Hbo1164 :::::::D::::::::::::::::::EE:::::::D::D:H:::G::ETAE:V::::