|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1263 | HQ3229A | VNG2118 | hla2712 | HVO_0333 | Hbo1146 | rrnAC2521 | Hmu3013 | Hut2489 | NP1256A |
933 | HQ3229A | 1315 | 924 | 879 | 847 | 834 | 842 | 831 | 873 | 852 |
1030 | VNG2118 | 924 | 1260 | 941 | 927 | 910 | 939 | 917 | 887 | 918 |
1081 | hla2712 | 879 | 941 | 1374 | 993 | 948 | 968 | 925 | 964 | 965 |
1060 | HVO_0333 | 847 | 927 | 993 | 1255 | 1026 | 972 | 930 | 956 | 982 |
1068 | Hbo1146 | 834 | 910 | 948 | 1026 | 1266 | 985 | 947 | 957 | 944 |
1086 | rrnAC2521 | 842 | 939 | 968 | 972 | 985 | 1332 | 1074 | 948 | 1011 |
1051 | Hmu3013 | 831 | 917 | 925 | 930 | 947 | 1074 | 1345 | 1011 | 987 |
1053 | Hut2489 | 873 | 887 | 964 | 956 | 957 | 948 | 1011 | 1253 | 1006 |
1066 | NP1256A | 852 | 918 | 965 | 982 | 944 | 1011 | 987 | 1006 | 1255 |
200 symbols consensus -------------MANDELIAALRAADAVQFGEFELSHGGTSDYYVDKYLFETDPDCLRL #oth 111111122222343243114...3.1..21...........4..1...2...1.51.53 HQ3229A :::::::MTIPQSPTTEDIV::::N:::::Y:::::::::::A::I:::::::::K::QI VNG2118 ::::::::::::MS:T:D:VS:::::::::::::::::::::E::::::::::::E::SA hla2712 MVADARCLGMTDDERRS::::::::::::R::::::::::::::::::::::::::A::: HVO_0333 ::::::::::::::::AA::E:::::::::::::::::::::S::::::::::::R::K: Hbo1146 ::::::::::::::::::::E:::::::::::::::::::::N::::::::::N:::::: rrnAC2521 ::::::::::::::::::::::::D::::K::::::::::::N::::::V:::N::::D: Hmu3013 :::::::::::::::::A::T:::D::::KY::::::::::::::::::V:::N:E::A: Hut2489 :::::::::::::-MTEL::D:::E:E::RY::::::::::::::::::I:::::T:::: NP1256A ::::::::::::::::Q:::D:::D:E::K::::::::::::E::::::V:::::G:::Q consensus IAEAFADRLA------DDTTLAGVALGAVPLVAVTAVETDTPYVIARKQAKEYGTGNRIE #oth 124..122223211115331.......1...1.1.121226...11..12.2...112.. HQ3229A ::S:::::I-::::::NE:::::::::::::::::STVAGQ:::VV::K::K:::::::: VNG2118 ::A:::::ID::::::E::::::::::G:::A:A::T:AGV::::::::::::::A:::: hla2712 VS::::::::D:::::T:AK::::::::::::::::T:LGR::::::::::::::::::: HVO_0333 ::::::E:V:::::::::DK:::::::::::::A:::::NK:::::::K::::::AK::: Hbo1146 ::::::AE:D::::::GVEK::::::::::::::::A:::::::::::K::::::AK::: rrnAC2521 ::G:::E:I:EWD:::M:A::::::::::::::::S::::I::::::::::::::::::: Hmu3013 :G::::ET::GADWYAEG:::::::::::::::::S:::G:::::::::Q:::::A:L:: Hut2489 :::::SE::-:::::::G:::::::::::::::::SA::::::::V:::Q:A:::::L:: NP1256A ::D:::::V-::::::G:AK:::::::::::::A::::::S::::V:::K:::::::Q:: consensus GRLDEGEEVVVLEDIATTGQSAVDAVEALREAGATVNRVLVVVDREEGARENLAEHDIEL #oth .31421...111.......2..21.12...11..1.3.131....1..13.4.1222211 HQ3229A :::N:D:::::::::::::T:::E::N:::DV::::E::F:::::Q:::::Q:ESNNV:M VNG2118 ::::D::::::V::::::::::::::D:::D:::::::A:I:::::::G::L::::GV:M hla2712 :::::::::::::::::::::::::::::::::::::::::::::::::E:L::D::::: HVO_0333 :A::::::::::::::::::::::::::::::::V:D::V:::::Q:::A:L::D:::A: Hbo1146 :::E:::::::::::::::N::L:::::::::::V::::::::::Q:::A:R:::A:V:: rrnAC2521 :D:TD::::II::::::::::::::A::::::::V::::::::::::::S::::D::L:: Hmu3013 :D:A::::::I::::::::::::::A::::::::::S::::::::::::::::::::L:: Hut2489 :E::::::::::::::::::::I:::::::::::V::::::::::Q:::::H:::::::: NP1256A :DF:A:::::::::::::::::I:::::::::::::D::I:::::::::::::::::::: consensus ESLVTASDLLA-DAD----- #oth 31.1..21..2212453222 HQ3229A :A::::T:::VD:ENV:::: VNG2118 AA::::::::-:::E::::: hla2712 :::L::TE::::ER:AE::: HVO_0333 :::L::E::::::::G:::: Hbo1146 D:::::E::::::::ESA:: rrnAC2521 S:::::::::::::PDDIDV Hmu3013 S::::::::::::RPDDAAE Hut2489 ::::::EE:::A:R:::::: NP1256A :::::::::::::R-:::::