|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1534 | VNG0274 | Hut1893 | NP1302A | hla2536 | rrnAC1863 | Hmu0845 | HQ1178A | HVO_0762 | Hbo0769 |
966 | VNG0274 | 1562 | 809 | 890 | 774 | 833 | 827 | 816 | 895 | 841 |
1041 | Hut1893 | 809 | 1527 | 930 | 894 | 956 | 929 | 857 | 949 | 843 |
1152 | NP1302A | 890 | 930 | 1565 | 953 | 966 | 994 | 956 | 1059 | 967 |
1063 | hla2536 | 774 | 894 | 953 | 1549 | 875 | 879 | 899 | 1016 | 952 |
1142 | rrnAC1863 | 833 | 956 | 966 | 875 | 1616 | 1263 | 955 | 1008 | 1008 |
1085 | Hmu0845 | 827 | 929 | 994 | 879 | 1263 | 1616 | 911 | 1017 | 991 |
1172 | HQ1178A | 816 | 857 | 956 | 899 | 955 | 911 | 1557 | 1112 | 1040 |
1327 | HVO_0762 | 895 | 949 | 1059 | 1016 | 1008 | 1017 | 1112 | 1541 | 1140 |
1222 | Hbo0769 | 841 | 843 | 967 | 952 | 1008 | 991 | 1040 | 1140 | 1548 |
213 symbols consensus ---MDLSRVAAHEPVTVTDAGREAAVIAPVVTR---PAGAHLLFTKRADHLGEHPGQMSF #oth 122.3253143241472533313...11112431114337121..1..21.21....... VNG0274 :::::::G::::R::R:::QD:A:::LV:::DA:::AD::A:V:::::AD:SD::::::: Hut1893 ::::::GP::::D:AS:-T:P:::::LVGI:E:::::::T:::::R:::::ED::::::: NP1302A MTG::WE:::::::TAAV:GD:::::LV::ID:::::D:Y::::::::E::::::::::: hla2536 ::::::TGLRRYT:EG::R:R:::::L:::IE::::DGE:::::::::A::::::::::: rrnAC1863 ::::QFD::::::::V:D:EPQ:::::::::::::::::EAI:::::::::SD::::::: Hmu0845 ::::EFD:::S::AIE:AAEP::::::V::::DAGDGDDHAV:::::::::SD::::::: HQ1178A MLY:N::A:NT:A:TP:I::::R::::::I:RI:::G:ER:V:::::::::::::::::: HVO_0762 ::::::AG:TR::::::-::::R::::::::F::::DERP:I:::::::::::::::::: Hbo0769 :::::::::SSCDAE:L:::::Q:::::::L:::::RGED:V:::::::::::::::::: consensus PGGGREPSDADLRATALREANEEIGLRPSEAAFHGRLDDIRTVTDYAVRPFVARVPDREY #oth ...13..5.62144..2..15..1.142711526.2...14.214.212..1252.1.31 VNG0274 ::::C::R:P:C:S::A:::::::::GRD:V::A:Q::::A:I:E:::T:::G::::::F Hut1893 ::::S::V::::SE::::::R::V::E::::TIV:::::::::SE:SI::::GH::::S: NP1302A :::::::V:SS:E:::T:::H:::::K::::DVR::::::P::SN::::::I:AI::::: hla2536 :::::::I:RT:TD::::::D::V:M::G:VDVV:::::T::SSA:R:::::GVA::::: rrnAC1863 :::::::E:D::LR::::::::::::D:LAVNVL::::::::I:R:S:::::G:I:::D: Hmu0845 :::::::A:DS:LR::::::Q::V::D:RA:NVI:::::::::SE:S:::::::I::::: HQ1178A :::SH::::T:::E::::::::::::DST::Q::::::::L:::::::::::VG::Y::: HVO_0762 :::::::::::::::::::S::::::::E:::::::::::::::::::S::::T::::A: Hbo0769 :::S:::::G::::::::::Y::::::SN:VE:F:C::::K:::::S:T::::::::::: consensus EPDEREVAEIAVLAVSALTDLANYESERR-DHPHYGDIRLHFFHVDGYTVWGATGRMLVQ #oth 5.223..1.112.2233.2233..1214.13.151.5422.1.2.21.....1.1.111. VNG0274 D::::::D:V:::S::::::PS::DL:K::I::E::TALV::::::::::::::A:I::: Hut1893 ::NDG::::::::S:D::::P::::T:C:::::DH:SVQ::Y:::GD:::::::A:I:T: NP1302A V:::E::::::::SL:E::ASE::::::::E:AN::SV:I:Y:R:::::::::::::::: hla2536 V:::S::::V:::PTRG:::P::::::::V:::E:::H:V:::::G::::::V::::V:: rrnAC1863 L:SDE:::::VT:P::E::::D:::::H::::::::E::::::Y::::::::::A::::: Hmu0845 Q:SDE::::VV::::DD:V::D::::::::::::::::::::::::::::::::A::::: HQ1178A H:::::::::VS:P:::::::S:::LT:::E::VH:A::::::Y:N:::::::::::::: HVO_0762 :::Q:::::::::::GD:I:R::::::::::::Q::E::::::::::::::::::::::: Hbo0769 ::::::::::::::::D::N:D:::::E::M:::::KR:::::::::::::::::::::: consensus LLELATDWRAPEEVDRVVDPDADLPI------- #oth 1.11212.23.4231224321422.52211221 VNG0274 F:D::AG:TP:DRDPT::EL:P:Y:ETS::::: Hut1893 ::::S:E::V:RTL:--CQ:ETNP:A::::::: NP1302A F:::::::TP::T::::::::::Y:V::::::: hla2536 :::RT:::::::::::::GA::E:::::::::: rrnAC1863 :::::::::V:P:P::YME::D:::PSVRDEAE Hmu0845 ::::::::TM:T:P:::AG::D:Y:PSVRDQV: HQ1178A ::::T:::S::::::::I:::S::::::::::: HVO_0762 ::::T::::V:::::::::::::Y:V::::::: Hbo0769 ::::T::::::P:P::::::::E::L:::::::