|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2284 | HQ1875A | VNG1075 | HVO_1462 | hla2155 | Hbo0085 | NP2734A | Hut1087 | rrnAC0845 | Hmu1612 |
1778 | HQ1875A | 2343 | 1627 | 1675 | 1715 | 1655 | 1406 | 1345 | 1464 | 1373 |
1834 | VNG1075 | 1627 | 2290 | 1579 | 1686 | 1611 | 1501 | 1371 | 1451 | 1388 |
1750 | HVO_1462 | 1675 | 1579 | 2285 | 1651 | 1654 | 1379 | 1311 | 1406 | 1318 |
1962 | hla2155 | 1715 | 1686 | 1651 | 2359 | 1656 | 1488 | 1474 | 1506 | 1473 |
1760 | Hbo0085 | 1655 | 1611 | 1654 | 1656 | 2224 | 1366 | 1346 | 1377 | 1393 |
1708 | NP2734A | 1406 | 1501 | 1379 | 1488 | 1366 | 2411 | 1471 | 1586 | 1562 |
1623 | Hut1087 | 1345 | 1371 | 1311 | 1474 | 1346 | 1471 | 2213 | 1628 | 1566 |
1716 | rrnAC0845 | 1464 | 1451 | 1406 | 1506 | 1377 | 1586 | 1628 | 2319 | 1698 |
1650 | Hmu1612 | 1373 | 1388 | 1318 | 1473 | 1393 | 1562 | 1566 | 1698 | 2213 |
331 symbols consensus ------------T-TADVSRRRAWVMAARPQTLPAAAAPVIVGTGLAVHDGVFAPLPALA #oth 11112222223344234313331121.1..1....12..13..311.213121.32.221 HQ1875A ::::::::::MSAQ:QSI::QK:::::::::::::::::IL::::V:I:::::::::::: VNG1075 :::::::::::M:Q::::::Q:::L:::::H:::::::::V:::A::::T::L:VW::V: HVO_1462 ::::::::::::MS:Q:I:::::::::S::::::::::::V:::AV:::ADL::::::F: hla2155 MVSLRDDTSLPA:MSTE::::::::I:::::::::::::::::V:::::::A:::::::: Hbo0085 ::::::::::::-:-----------::::::::::::::IF::V::::::::::A::::: NP2734A ::::MGAATRVAPM::AA:STK::L::::::::::G::::::::::::YH:::::::::F Hut1087 ::::::::::::-:-----------:::::H::::GT::::::V:V::::::::LF:T:: rrnAC0845 ::::::::::MS:A:::::K:Q:::::::::::::G:::::::M:::::A::::L:::V: Hmu1612 ::::::::::::-:-----------::::::::::GS::::::A:::L:::::::::W:: consensus ALVGALLIQIGTNFANDYYDAVQGADTDDREGFTRVTAGGLIEPAEVKRAMYLTFAAAIL #oth .13..1.1.11.......1..13....22.1.....1.1...4174..2.1321123122 HQ1875A ::L::A:::::::::::::::IK::::A::::::::::::::D:PA:::::::::MI::: VNG1075 :::::A::::A:::::::::::R::::E::::::::::::::R::R::Q:::V::::::: HVO_1462 :::::::::V:::::::::::::::::EA:::::::::::::P:S:::::::::::::V: hla2155 :F:::A:::V:::::::::::I::::::::::::::V:S:::::G::::::W:::::::: Hbo0085 :F:::A:::::::::::::::::::::A::::::::::::::A:KS:::::::::::::: NP2734A ::F::::L::::::::::::::R::::E::D::::::::::::::A::::::A::GLSMV Hut1087 ::::::::::::::::::F:::K:::::E:::::::::S:::::D:::::IIV:YGL::G rrnAC0845 ::::::::::::::::::::::K:::::E:::::::::::::DAE::::::IA:YGL:VV Hmu1612 ::A::::L::::::::::::::N:::::::::::::::::::PAQQ::Y::AAAYGF:VV consensus VGTYLVAVGGVPILVVGLASVAAGIAYTGGPYPLGYHGLGDLFVFVFFGVVAVTGTYYVQ #oth 3.32..31..2..121..31121.12.1...2.1..2....2...21..12..2..1... HQ1875A ::AT::W:::I:::I:::L::GS::::::::::::::::::V:::::::LI::::::::: VNG1075 D:V:::F::::::::I::::::S::T:::::::::::::::A:::L::::I::::::::: HVO_1462 L:::::Y:::::::::::L:::S::::::::::::::::::::::::::L:::A::F::: hla2155 :::S::Y::::::::I::::::::::::::::::::::::::::::::::I::::::::: Hbo0085 L:::::Y::::::::I::L:::S::::::::F:::::::::::::I:::::::::::::: NP2734A I:L:::::::::::::::::IV:::T:S:::L:Y::R::::::::::::L:::A:::::: Hut1087 ::L::::I::::::F:::SGI::::L:::::::Y::Y:::::::::Y:::F::V:::::: rrnAC0845 I:V:::::::L::V::::SGI:::VL:::::F:Y::R:::::::::Y::L:::::::::: Hmu1612 ::V:::::::::::::::T:I::::L:::::::Y::R:::::::::Y::::::::::::: consensus AAAHA--AGAFPLWIPPGTVPLAAVVASLPAAALSTNILVVNNVRDREEDATTGKRTLAV #oth .11452122411332.3222323122.1.12.22..1.11...1..331.231..2.... HQ1875A :::LI::::T:::G::A:::S:T:I:::::I::::::::::::::::N:::::::::::: VNG1075 ::::L:::::::VA::::::::::::::::V::I::::I::::I::KD::E::::::::: HVO_1462 ::SVL:::APLSVG::A:::T:V::L::::I::I::::::::::::K::::::::::::: hla2155 :::L:::G::::::::E:::T:::::::::V:::::::::::::::LK:::E:::::::: Hbo0085 :::VI:::DPLSVG:::N:L:FD:F::::AV:::::::::::::::K:::E::::::::: NP2734A ::::-::G:W::::::E::L:A:::::G::::GF::A::::::I::::T::EA::H:::: Hut1087 ::STM:::DL::::V:S:::S::V::::::::T:::A::N:::I::I:T:RKA::::::: rrnAC0845 :V:S:SGV:T::MTL:::S:TA::IT::::::G:::A::::::I::::T:RAA::K:::: Hmu1612 :V:TSD:::L::T:L:SEIGLAT:::::::::G:::A:::::::::::T::EA::::::: consensus RFGYRFSRLEYLAMLGLAYAVPVWFALDG-YGLAVLLPLVTLPLAASVARTVLTETAGDA #oth 32.1221.4124413331.33.231443451335121.1312.3.34143.143315.23 HQ1875A :Y::T:A:A:FITL:I:::S::I::LSRTA:T:::G:::::::I:L::MH:IC::::::M VNG1075 :::::::::::AGL:VV:::A:L::YAT::::AS:F:::::::::V::TK::FER:E:A: HVO_1462 ::::G:A:A::VT::A:::::::YLWTRAGFDWF::::VFSM:V::RI::::V:::K:EK hla2155 ::::::::GQ:::L:A:::LT:L::FAE::::::A::::A::::::G::::::::::::: Hbo0085 ::::T:::G::::::A:::L::::::TRQTF:GV:F:::::::Y:I::::::::K:S:E: NP2734A IL:::L::I:WSL:A::G::I::V:W:::::PAT:::::::A:::IAIG:::WNR:D:E: Hut1087 IL:D:L:::::VF:I:T::V:::V::F:SDF::PA::::L:::::V::TL:::::SG::V rrnAC0845 YL::GW::V:F:L:V:M::V:::V::::SQ::::A:A::L::::::TISK::::Q:G::: Hmu1612 M:::::::::F::LV:M::V::IG:::::AF::PA:A::LS::::V::SK:::RR:D:E: consensus LNPALERTGKLLAAHSVLFAIGLALP----- #oth .1.1.221.122231122.23.224542321 HQ1875A :::T:::V:::::GYAL::S::::IKTLPVV VNG1075 :::::S:::Q::::Y:A:::V:V:V-::::: HVO_1462 ::::::D::::::LYA:::S:::V:A::::: hla2155 ::::::S:::::::YA:A::V:::V-::::: Hbo0085 :::::::::::::I::L::G:::SFGGLPL: NP2734A :::::Q::::::F::::C::L:F:A:AVI:: Hut1087 :D:::::::QVMV::A::::V:::::QVI:: rrnAC0845 :::T:::V:QT:F:::::::A:::ATQLL:: Hmu1612 :::::::V:QTVF:::::::L::::TA::::