|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1802 | Hut0396 | hla0117 | HQ1260A | VNG0335 | NP1204A | HVO_0694 | Hbo0842 | Hmu3012 | rrnAC1757 |
1520 | Hut0396 | 1806 | 1256 | 1398 | 1333 | 1356 | 1417 | 1395 | 1298 | 1302 |
1458 | hla0117 | 1256 | 1809 | 1265 | 1293 | 1395 | 1407 | 1425 | 1230 | 1172 |
1488 | HQ1260A | 1398 | 1265 | 1985 | 1348 | 1382 | 1454 | 1465 | 1255 | 1199 |
1458 | VNG0335 | 1333 | 1293 | 1348 | 1804 | 1295 | 1407 | 1379 | 1230 | 1216 |
1557 | NP1204A | 1356 | 1395 | 1382 | 1295 | 1799 | 1463 | 1470 | 1274 | 1275 |
1610 | HVO_0694 | 1417 | 1407 | 1454 | 1407 | 1463 | 1860 | 1681 | 1268 | 1301 |
1615 | Hbo0842 | 1395 | 1425 | 1465 | 1379 | 1470 | 1681 | 1857 | 1271 | 1304 |
1392 | Hmu3012 | 1298 | 1230 | 1255 | 1230 | 1274 | 1268 | 1271 | 1806 | 1389 |
1371 | rrnAC1757 | 1302 | 1172 | 1199 | 1216 | 1275 | 1301 | 1304 | 1389 | 1791 |
254 symbols consensus MSDLPDEFNCTITNWEYIYGLCRDVSDDVKAADFEPDVVVALARGGWFAGRCLCDFLGLD #oth .21..12.3..2.1.....21..2.11411322.1...1.1.......1..11......1 Hut0396 :A:::E::P::::::::::::::::::::::D::::::::S::::::::::T:::::::: hla0117 ::::::D:D::L:::::::::::N::NA::R:::::::::::::::::::::I::::::N HQ1260A ::::::Q::::::::::::D::::::NQIR:DS:D::::::::::::::::::::::::: VNG0335 ::::::D::::::::::::::::::::Q:::::::::::::::::::::::::::::::N NP1204A :::::::::::V:::::::S:::::A:H::::E::::::::::::::::::::::::::: HVO_0694 :G:::::::::::::::::::::::::E::TSE:::::I:::::::::::::I::::::: Hbo0842 :G::::::::::::::::::R::::::Q::G:E:D:::::::::::::::::I::::::: Hmu3012 :::::E::S::::::::::D:::R:AN:::::::::::::::::::::G::::::::::: rrnAC1757 :GE:::::S::::D:::::::::::A::::::E:::::::::::::::G::::::::::: consensus DLTSLKMEHYVGTAQKSNEPEVRYPMPEGSVEGKDVLIIDDIADTGGSIERAYEYVTERD #oth ..1...2.....112225.1211..11211.12.1..11.......2.142.311.5112 Hut0396 ::::::I:::::::A::Q:::::::::::::A::::::V:::::::Q:L:H:::::S::: hla0117 ::::::::::::A:E::D::QI:::::::::::::::::::::::::::R::E:::DD:: HQ1260A :::::::::::::::TT::::I:::::Q:::AE::::::::::::::::::::::::D:: VNG0335 ::::::::::::::E::A::::::::::::::D:::::::::::::::::H:H:::QD:: NP1204A :::::::::::::G:::D::Q:::::::::::::N::V:::::::::::S:::::::::: HVO_0694 :::::::::::::::::::::::::::::::::::::::::::::::::K::H:::N::N Hbo0842 :::::::::::::::::G:::::::::::::::::::::::::::::::::::::::::: Hmu3012 ::::::V::::::::SGQ:AKIK::::DD::AD::::VV:::::::K::QT:AD::R:AG rrnAC1757 ::A:::V:::::::A:GE:AQ:K::LAD:A:::::::VV:::::::Q:::T:A:C:RD:N consensus ANEVRTATLQLLQTSEFEPDFVGERLEEWTWVVYPWNFIEDMIDLISGVMAKADQDTFDE #oth 133.........2..211.111..1.22.2.1......2...2113412.223.262235 Hut0396 P:A:::::::::::::::::::::::A::V::::::::::::T::::S::::::AE::S: hla0117 :G::::::::::G::::Q:::::::::Q::::::::::L::::::TE:A:ER:::TV::R HQ1260A P:I::::::::::::A:::::I:::::T:A::::::::::::T::LT:::R:T:AE::TI VNG0335 ::A::::::::::::A::::Y:::::D::A:I::::::::::::I:A::::TD:DGPYTT NP1204A :A::::::::::D::::::E:::::::T:::::::::::::::E::G:::E:::A:::SR HVO_0694 :G::::::::::::::::::Y::::::::A:::::::::::::::T::::::::D:::EL Hbo0842 :G:::::::::::::::::::::::::::::::::::::::::::TT:::E::::A:::V Hmu3012 PAS:::::::::D:::H:::::::::::::::::::::V::::E:L::L:::S::RVH:: rrnAC1757 PSS::::::::::::DH::E::::S:D:::::::::::V:::VE:VA:::::S::Q:HT: consensus EDIRHLLAEYHGVDRIEMEIAQPDRLDEVLSEMERRGVVEA-------------AGDD-- #oth 312.421431.4231121.1..12.16..33..2..133361111111111111213211 Hut0396 ::V:S::RS::E::P::::::::::MA:::T:::::::I:Y:::::::::::::::E::: hla0117 ::V::Y:D:F::IG:::::V::AG::::::D::V::D:ADR:::::::::::::::EN:: HQ1260A P:L:EG:K:::S:E:::::::::::ME:::D::Q:::Y:::VTTNEASGDTPVET:::VS VNG0335 AG::D:::D::D::::Q:::::::::T::R:::V::D:LA::::::::::::::TDA::: NP1204A D::::Y:SA:::LE::::::::::::::::A::::::AARK:::::::::::::V::::: HVO_0694 :::::Y:::F:D:::::::::::::MP::M:::::::Y::S:::::::::::::T::G:: Hbo0842 :::::Y:::F:N:::::::::::N:MS::M:::::::F::T:::::::::::::T::G:: Hmu3012 D:L:::FR:::::E::Q:::::::::::::T:::::D:I:W::::::::::::::DGG:: rrnAC1757 D:::R::R:::::S:TNL:::::N::G::TT:::::::::S::::::::::::::::G:: consensus --AWRLVE------ #oth 114.3233422112 Hut0396 ::::::AAED:::: hla0117 ::::T:A::::::: HQ1260A QPT::I::TDEVGV VNG0335 ::R:A::-:::::: NP1204A ::::QPA-:::::: HVO_0694 ::::::L:NDGVGA Hbo0842 ::E:::::NEGVGA Hmu3012 ::-::::D:::::: rrnAC1757 ::-:Q:TDD:::::