|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1294 | hla1690 | VNG0368 | HQ1238A | NP0822A | Hbo0812 | rrnAC0693 | HVO_0723 | Hmu0903 | Hut0124 |
789 | hla1690 | 1738 | 722 | 656 | 679 | 672 | 679 | 661 | 684 | 700 |
955 | VNG0368 | 722 | 1295 | 804 | 757 | 875 | 777 | 822 | 833 | 828 |
892 | HQ1238A | 656 | 804 | 1279 | 754 | 915 | 748 | 832 | 825 | 814 |
888 | NP0822A | 679 | 757 | 754 | 1252 | 777 | 762 | 741 | 824 | 824 |
1032 | Hbo0812 | 672 | 875 | 915 | 777 | 1291 | 808 | 919 | 884 | 895 |
964 | rrnAC0693 | 679 | 777 | 748 | 762 | 808 | 1243 | 765 | 889 | 849 |
979 | HVO_0723 | 661 | 822 | 832 | 741 | 919 | 765 | 1309 | 847 | 898 |
1058 | Hmu0903 | 684 | 833 | 825 | 824 | 884 | 889 | 847 | 1277 | 960 |
1024 | Hut0124 | 700 | 828 | 814 | 824 | 895 | 849 | 898 | 960 | 1280 |
236 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 hla1690 MAPAHAGTPRTRSGRPSRSCRRLRRGERKPHGRGRLSEGMDESGSGKGTESEEGTGSADE VNG0368 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1238A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0822A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0812 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0693 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0723 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0903 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut0124 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus MAD-DTDPPIEARVGDALREAGETVATAESCTGGLIGSLLTDVPGSSDYFDRSLVTYSYD #oth 2633243522.532.45.3232211.2...1....1..32.11..1.1....14...1.1 hla1690 I:GT:ESE:::KTL::L:T:R:::L:::::L::::V::RV:E:::A:A::::GF:::A:: VNG0368 :D:S:P:::::QSL:::::D::H::::::::::::::::::::::A:A:::::Y:::::: HQ1238A :H:FA::::::::::EI:EK:DA:::V:::::::::::::::I::A:A:::::V:::::: NP0822A ---:---MN::RA::EM:ADR::Y::::::::::::::::::I::A:::::::I:::::: Hbo0812 :REFA::::V:::::S::::S:::L:A:::::::::::F::::::::::::::V:::::: rrnAC0693 ::::::AT:V:K:::KR::::AA::::::::::::V::KI::I::::::::::::::::E HVO_0723 :REFAS:::E:V:A::::::::H:::V::::::::::::::::::::::::::::::::: Hmu0903 :P:::::GG::::::ET:::TDA:::V::::::::::::::::::::::::::V:::::: Hut0124 :T:::S:L:::E:::A::::RD::::V::::::::::::::::::::::::::::::::: consensus AKREELAVSRESLDAHGAVSEPVARQMARGVRDTADTTWGVATTGIAGPDGGTPEKPVGT #oth ..13411.2..4..22....22..31..3.1..4.221.121...1...3..2422...2 hla1690 ::::L:G::::::::E::::AA::E:::A:A::H:::::A:::::::::::::A:::::L VNG0368 ::LDH-G::::H::E::::::::::::::::::Q:G::::I::::::::::::::::::: HQ1238A ::LTA:G::::A::D:::::KS::SE::A:::::::VD:::::::::::T:::DAE:::A NP0822A ::L:D:G:P::I:::E::::::::E::::::::H:GV::::::::::::E::SEG::::: Hbo0812 ::LT::::::::::E:::::::::::::T::::::G:D:A:::::::::::::D:::::: rrnAC0693 ::::L:::::::::::::::::::IE:::::::::R:D:::::::V:::S::S::T:::: HVO_0723 :::H::::::::::E::::::A:::E::A::::V::A:::L::::::::E::L:G::::: Hmu0903 :::DL:::D::V:::A:::::::::::::::::::::::::::::V:::S:::E:T:::: Hut0124 :::T:::::::A::EE::::::::::::G::::R::V::::S:::::::T:::T:::::: consensus VYIGVAYAAPWGTGESYTTVERYEFDGDRTAIKRQIARQALEDLRDALQSRP---- #oth 11111.3212..143.54313.5121.3.331.341144..541643343564221 hla1690 ::V::::::::::EA:FVRT::VVLN:::G:V::KAVDT::DA:VRTIREVDAEE: VNG0368 A:::::::GD:::AT:A:::V:R::::::Q:V:A::::A::TV:AAE:EKVT:::: HQ1238A A::::::QGD::SN:::R::::TV:::Q:::::E::::R:::L:YESV:EQ::::: NP0822A ::::::R::D::::D:WWS::::V:::S::E::::::V::::::KT:AA:E:R::: Hbo0812 ::::L::RGE:::Q:::A::::H:::::::Q::E::::::::TVL::VE::SV::: rrnAC0693 :::A::E::::::N::GV::S::::::T:RE::SA::T:::R::ET:::E--:::: HVO_0723 :FV:::F:::::S:D::AR:::F:Y::S::QV:ER:::G::AL::EEIE:ESVTTG Hmu0903 A:V:::::::::::D:S:A:::::::::::TV::E::::::S:::::V:R:A:::: Hut0124 :F::::::::::S:::A:R:R::::::S::E::::::Q:::T::Y:::D:GGL:::