|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1721 | Hut0561 | HQ1171A | NP1134A | Hmu0654 | hla2737 | HVO_0770 | Hbo0761 | rrnAC1809 | VNG0289 |
1229 | Hut0561 | 1708 | 1073 | 1128 | 1066 | 1112 | 1139 | 1146 | 727 | 1098 |
1291 | HQ1171A | 1073 | 2476 | 1271 | 1159 | 1124 | 1175 | 1176 | 797 | 1222 |
1359 | NP1134A | 1128 | 1271 | 1770 | 1188 | 1186 | 1168 | 1213 | 861 | 1247 |
1323 | Hmu0654 | 1066 | 1159 | 1188 | 1780 | 1229 | 1179 | 1243 | 874 | 1194 |
1406 | hla2737 | 1112 | 1124 | 1186 | 1229 | 1933 | 1218 | 1311 | 872 | 1185 |
1419 | HVO_0770 | 1139 | 1175 | 1168 | 1179 | 1218 | 1815 | 1353 | 891 | 1247 |
1500 | Hbo0761 | 1146 | 1176 | 1213 | 1243 | 1311 | 1353 | 1935 | 924 | 1258 |
1011 | rrnAC1809 | 727 | 797 | 861 | 874 | 872 | 891 | 924 | 1159 | 919 |
1381 | VNG0289 | 1098 | 1222 | 1247 | 1194 | 1185 | 1247 | 1258 | 919 | 1721 |
353 symbols consensus -----------------QDLEAELERARDLDVAELADAIESIGFECTRCGACCTGHAPAD #oth 111111111111222235313331431341225421111131111111114113355544 Hut0561 :::::::::::::::::M::::::AA::A::::AI:::::::::::::::H::R:TDE:: HQ1171A MKDAEMNELSDSEQEEV:S:::::A::KS:S:KS::::::::::::::::::::A:HSGE NP1134A ::::::::::::::::MES:::A:G::ES:S:D:::::::::::::::::G:::AIDDEA Hmu0654 :::::::::::::::::VT:ASD:::::E:::G:::::::A:::::::::E:::ATE::V hla2737 ::::::::::::::::MES:::::DG:::::PG:::::::::::::::::G::::Y::DE HVO_0770 :::::::::::::::::M::D:::D:::::::S::::::::::::::::::::K:YEGD: Hbo0761 ::::::::::::VSHAGPT::D::::::::S::::::::::::::::::::::K::G::: rrnAC1809 :::::::::::::::::------------------------------------------- VNG0289 ::::::::::::::::M:::::::::::E::::T::::::T::::::::::::KSE:D-- consensus ------------------------------------------------------------ #oth 222333223332323411111111111111111111111111111111111111111111 Hut0561 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1171A NNDEKTENAHEDETEPAHTQINNRSKTEAPAATAPTENGRVSHNNGSDDQTRTVSNQDNK NP1134A ::::::::::::::GT:::::::::::::::::::::::::::::::::::::::::::: Hmu0654 ::DPADEEDTAESAEN:::::::::::::::::::::::::::::::::::::::::::: hla2737 PGGAPAGEGADDPADR:::::::::::::::::::::::::::::::::::::::::::: HVO_0770 ::::::::::::::GP:::::::::::::::::::::::::::::::::::::::::::: Hbo0761 ::::::::::::::DR:::::::::::::::::::::::::::::::::::::::::::: rrnAC1809 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG0289 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ----------------EPHTATVFPDEVRALQDAAE--------------YDWRDVARPM #oth 11111111111111112111112111121533344365421223211113422113111. Hut0561 ::::::::::::::::--:::::::::I:TI::GD::::::::::::::::::::::::: HQ1171A ANTDVAMESVSTSTST:::::::::::::E::AT:DNMRDGTADTDAHSPTE:::::::: NP1134A :::::::::::::::::::::::::::::Q::A::DERF::::ET::::S:::::::::: Hmu0654 ::::::::::::::::::::::I::::I:Q:R:DG-::::::::::::::R:F::I:::: hla2737 :::::::::::::::::::::::::::::EVV::::VQF::::GE::::S:::::A:::: HVO_0770 ::::::::::::::::::::::::::::::::E:GGDDSKGESGT::::PME:::::::: Hbo0761 ::::::::::::::::::::::::::::::V:::T:TES::::::::::::::::::::: rrnAC1809 ::::::::::::::::--------------------::::::::::::::---------: VNG0289 ::::::::::::::::D::::::::::::DV:A::GAET::::::::::DR::::::::: consensus PYGLDEGDDG-PEGETFEWALQTDACGDCTFY----EDDDGTGACTVHEDRPLICQTYPF #oth .1..413311242.1......1113....2..111333431412.22134...1.3.... Hut0561 :F::T:P:::PAT::::::::A::::::::::::::-:RE:EA-:SIY:R:::::R:::: HQ1171A :::::D--EN:ST:T::::::::::::::V:::::::EA::V:S:QA:DN:::::A:::: NP1134A ::::::--:::-T::::::::::::::::::::::E:A:::::::::::::::V:::::: Hmu0654 ::::S:TA:::V::::::::::::G:::::::::::AEE::V:S:::::::::::::::: hla2737 :F::S:::::E:A::::::::A::D::::::::::::ETG:Q::::::DA:::::::::: HVO_0770 ::::V::::::::::::::::::T:::::R:::::EG::S:R:::Q:::::::::E:::: Hbo0761 ::::T::::::::::::::::::::::::V::EESEGA:GT::::SI:S::::::E:::: rrnAC1809 ::::AD:PE:::::::::::::::D::::::::::A:G::::::::::G::::::::::: VNG0289 ::::::--:::-A:::::::::A:S::::::::::R:::::::::S::GS:::::::::: consensus SVALGGT----SQPMGEAV---------------DEEGAVRAHECEGLGRDISREDAEEL #oth .1.1221111122....1.111111111111111.3114.1...........3.12.12. Hut0561 :L:IEDDGAEL:A::::V:::::::::::::::::R::::Q:::::::::::::A::I:: HQ1171A :::::::::::::::::::::::::::::::::::TA:M:::::::::::::T::A:::: NP1134A :L:::::::::GE::::::::::::::::::::::R::L:::::::::::::D::T:::: Hmu0654 ::::DN:::::V::::::::::::::::::::::::A:L:::::::::::::E:::::K: hla2737 ::::D::::::::::::::::::::::::::::::A::::::::::::::::::::::A: HVO_0770 ::::::::::::::::::::::::::::::::::::::V:::::::::::::::A::::: Hbo0761 :::::::::::::::::::DSVALGDQQDPDETD::AMT::::::::::::::::::::: rrnAC1809 ::::::::::::::::::::::::::::::::::::::V:::::::::::::::A::::: VNG0289 ::::::::::::::::::::::::::::::::::::A:M:::::::::::::::A::::: consensus AAALKERAVRELEEAIGVRDAYEPV--EPDAGEVVVHDSEGAKRPDGTPID-- #oth .31.13.11.1.3..141116.313116455143..2....2.21..124542 Hut0561 :ET::R::::::Q:::::::N:::T::--:IDGI:::::::Q::::::R:RE: HQ1171A ::T:RT::I:::::::SL::::::-::PGNTDGI::::::::::::::A::N: NP1134A :ET::::SI:D:::::EL:ER:::-::R:::DGA:::::::S:::::::L:RR Hmu0654 ::T:::::I:::::::A:::S:::::::RAD:::::Y::::::::::::R-:: hla2737 ::::::::::::::::::::G:D:TAG:RSD:D:::F::::::AA::::::GD HVO_0770 :R::::::::::R::R::T::::S::::TGP:::::::::::::::::RVQ:: Hbo0761 ::::::::::::::::::::E::::::QTES::::::::::::N::::::EE: rrnAC1809 ::::::::::::T:::::::T:R::::D:S::Q::::::::::::::S:YE:: VNG0289 :G:::A::I:::::::D::E::A:A::N:EP:AT:::::::::::::SAYPN: