|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1480 | VNG2082 | HQ1380A | NP0084A | rrnAC2796 | Hmu3145 | Hut2472 | hla0168 | HVO_0444 | Hbo1063 |
1016 | VNG2082 | 1546 | 918 | 874 | 921 | 893 | 957 | 973 | 906 | 932 |
1103 | HQ1380A | 918 | 1748 | 911 | 947 | 920 | 942 | 994 | 995 | 1033 |
1044 | NP0084A | 874 | 911 | 1491 | 1049 | 953 | 1004 | 986 | 917 | 927 |
1188 | rrnAC2796 | 921 | 947 | 1049 | 1499 | 1157 | 1045 | 1047 | 982 | 986 |
1175 | Hmu3145 | 893 | 920 | 953 | 1157 | 1507 | 1047 | 1034 | 1036 | 1029 |
1170 | Hut2472 | 957 | 942 | 1004 | 1045 | 1047 | 1487 | 1055 | 1060 | 1032 |
1234 | hla0168 | 973 | 994 | 986 | 1047 | 1034 | 1055 | 1613 | 1159 | 1121 |
1218 | HVO_0444 | 906 | 995 | 917 | 982 | 1036 | 1060 | 1159 | 1503 | 1221 |
1217 | Hbo1063 | 932 | 1033 | 927 | 986 | 1029 | 1032 | 1121 | 1221 | 1525 |
233 symbols consensus ------------------------MEQMDG-LDVTGCERCPDLVESRSRIVNGVGPADAD #oth 111111111112122223333343435321225155.31.43.13...11.1.2..41.1 VNG2082 :::::::::::::::::MDEPSQRDDT:::AAVTAC:T::DA::::::QV:::D::S::: HQ1380A MTGDDNHDQDTSSDLNTATDAPGSASTVN::::::A:K::QG::::::Q::::::::::E NP0084A ::::::::::::::::::::::::--MT:D:V:::D:R::SE:CA:::::::::::T::: rrnAC2796 ::::::::::::::::::::::::::::::::::V:::::D::CG::::::::::::::: Hmu3145 ::::::::::::::::::::::::::::::::Q::D::::G:::D::::::D:T::PE:: Hut2472 ::::::::::::::::::::::::::H:::::S:E:::Q:G:::A::::::D:::::::E hla0168 :::::::::::MSTPLAPRSMTENGDAL::D:R:PS:::::A:::::::::D::::T::: HVO_0444 ::::::::::::::::::::::::::H:E:::C::::::::E::D:::::::::::D::: Hbo1063 ::::::::::::::::::::::MSDDE:::::C:RE:::::E::::::Q:::::::D::: consensus LLFVGEAPGANEDEQGEPFVGRSGDVLDDALRDAGLARADVRITNCVRCRPPDNRDPTSE #oth 11.2..1..14..26.1.......2...22.222.12.511...........1..1.254 VNG2082 V::I::::::T::DT:V::::::::::::E:AA:::::E::::::::::::::::::H:: HQ1380A :V:I::::::::::Y::::::::::::::::NE::VS:DSI:::::::::::E::N::T: NP0084A :::::::::ET:::V:::::::::::::EG:::R::S:R:I:::::::::::::::::A: rrnAC2796 ::::::::::::::::::::::::::::AG::::::D:G::::::::::::::::::RNG Hmu3145 ::::::::::Q::AD:::::::::::::::::E:::D:G::::::::::::::::::RQA Hut2472 :::::::::ER:::::::::::::T:::::::::::S:::::::::::::::E::::::D hla0168 ::::::G:::Q:::R:::::::::::::::::::::::::::::::::::::::::::T: HVO_0444 :::L::::::K:::G:::::::::S:::::::E::::::::::::::::::::::::::D Hbo1063 :V:L::::::::::::::::::::S::::::::V::::S:::::::::::::E:::::KT consensus ELANCRGYLEREIDLVDPEVIVTLGKVPSEHLLDRSVAVTSEAGDVVDVRIGGQSRRVLV #oth .12...41.33.23411.311.1.....21.1.2.32.1.511.3141242323522122 VNG2082 ::::::SH:VA:V:S:::A::::::::::::V:E::::::G:::S:ER:SL::TT:D:V: HQ1380A ::S:::R:::H:LSALN:A::::::::::::::::QI:::TA::::T:::L:D::Y::II NP0084A :RS:::P::DA::AA:::D:V:A:::::A:::::::::::EA::AIY:A::D:TA::::: rrnAC2796 ::::::D:::T:::R:::::V:::::::A::::E:D::::G:::::F::A:A::P::::: Hmu3145 ::::::P::::::E:::::L::::::::A::::E:D::::::::::F:PE::::R:EL:: Hut2472 :RS:::P::D::::Q:::T:::::::::G::::G:DL:::::::SIE::D:E:TT::::I hla0168 :::::::::DA:::RL:::L::::::::::::::::::I:::S:E::::::A:A:::::L HVO_0444 ::S::::::A::LE:::::LV::::::::Q:::::G::I:N:S:S:::A:V:DA:Y:::L Hbo1063 ::G:::::::::LE:L::DLV:::::::::::::::::::K:::::::::L:ERLQ:::I consensus SVHPAATLYDRSQRETFDDTIARAADLAGA-----------AGGQSRLGDF-- #oth 11........3..333.531154.2433163111111123232..32..1111 VNG2082 CL::::::::A:::PA:RE::EQ::TM::::::::::::::D:::A::::Y:: HQ1380A ::::::::::Q::ST::V:::KS::S:::VQSDIDNPTDTTS:::::::EYED NP0084A C:::::::::P::::Q::AALDA:VGFLDDS::::::::::::::::::E::: rrnAC2796 ::::::::::P::K:::EAALTT::EFTD::::::::::::QS::::::E::: Hmu3145 :::::::::::::AD::::A::T:::YTDE:::::::::::DS::R::::::: Hut2472 C::::::::::::::::ER::QQ::::::-:::::::::::D:::VE:::::: hla0168 ::::::::::::::DG:FE:::::GE:S:TA:::::::GAGS:::::::E::: HVO_0444 :::::::::::::::G:FE::::::::S:LA:::::::DS::D::AS:::::: Hbo1063 C:::::::::::::D::S:::::::::S:LA:::::::DS::D:::S::::::