|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1123 | HQ3165A | hla0878 | VNG2576 | HVO_1950 | Hut2105 | Hbo1818 | NP0396A | rrnAC2156 | Hmu0059 |
521 | HQ3165A | 1243 | 349 | 303 | 405 | 327 | 465 | 396 | 431 | 471 |
562 | hla0878 | 349 | 1304 | 294 | 383 | 313 | 463 | 410 | 447 | 402 |
468 | VNG2576 | 303 | 294 | 915 | 335 | 310 | 432 | 333 | 412 | 395 |
646 | HVO_1950 | 405 | 383 | 335 | 1375 | 379 | 540 | 446 | 531 | 469 |
525 | Hut2105 | 327 | 313 | 310 | 379 | 1523 | 381 | 387 | 364 | 458 |
642 | Hbo1818 | 465 | 463 | 432 | 540 | 381 | 1109 | 429 | 505 | 495 |
691 | NP0396A | 396 | 410 | 333 | 446 | 387 | 429 | 1171 | 555 | 555 |
785 | rrnAC2156 | 431 | 447 | 412 | 531 | 364 | 505 | 555 | 1248 | 660 |
763 | Hmu0059 | 471 | 402 | 395 | 469 | 458 | 495 | 555 | 660 | 1027 |
198 symbols consensus MGYACPVCEAPQADAEHLANHLAFTAMTGGDDHEAWLDEHVPEWGDLGEDELAAEVVELA #oth ...2....34113.36...2.1.11.222221..4..112123.3364434.2551434. HQ3165A ::::::::::::Q::A:::D::::::IVHH::::S::E:::GD::QY:T:D::EI::::: hla0878 :::::::::T::R:G::::H:::::::LH:G:::V:::DR:TD:S:REPAG:::::TPH: VNG2576 :::L::::GVET::G::::::V::::L:R:G:::::::::A:A:A:S:PA:::DT::GH: HVO_1950 ::::::::D:::R:ET:::::::LQ:IVH:::::T:::::A:::A::NA:S:GPL:AD:: Hut2105 :::::::::T::V::K::::::::::LL:DAE::T:::::A:::EQADDEA::ERI::D: Hbo1818 ::::::::DV::Q:G:::::::::::::H:AE::S:::::::::SSSSP:::::R:T::: NP0396A :::V::::SD:::::S:::::::::::L:D::::::::DN::N:SSM::S:::SVIEDG: rrnAC2156 ::::::::DD::::DV::::::::::::::::::::::DR::D::Q::::::ST::::Y: Hmu0059 :::::::::E:::::G::::::::::L:::::::D::::::::::EF:::::::::I::: consensus EEAEFP----------QVFEDTVDR----------------DDGHDHDHGHDHDHGADDQ #oth 233333111111111152222233433333222222212125623535364434358556 HQ3165A TSVKYD:::::::::::::::::H:::::::::::::::::QH:RQMHDSSH:TTS:G:E hla0878 :D::YH::::::::::E::::::GHGRPDV::::::::::::L:AHDHA::::ST:RNRA VNG2576 T:TDAE::::::::::P:-------::::::::::::::::SEA:T::A----------- HVO_1950 ::R::D::::::::::E::::::::TG::::::::::::::GP::A:P::QE:::DIP:R Hut2105 :N:AL:GDRVEHDHGTTDLPTNG::TDRGHTGEGDHPGELAGG:QHTTDD::PGVTF::F Hbo1818 ::::YE::::::::::A::::::HD::::::::::::::::HA:::::SLFGD:T:TPE: NP0396A :S:A::::::::::::::::::AGALGENEEPAEERSGALF::E:::G:S:G:::DH:HD rrnAC2156 ::T::::::::::::::::::::::::::::::::::::::S:::S:::A:G:G::DLP: Hmu0059 D:T:::::::::::::--::-----::::::::::::::::A:::::Q:E:::G:EV:P: consensus QADPTG--DGSGALDADAAEVLREARELTREMLD--------DDDDRGDAD-G------- #oth 66635535566533242455223..24113436411222113542366234433535445 HQ3165A VEIG:MTETMETQM:EETQT:IN:::K::AQ:IH::::::::TE:EG:::TNDEKTDARE hla0878 AS:RP:AG:AA:ET:PEV:AAI:::::MA::VG::::::::G::GTSVES:A:GNDGETD VNG2576 ---:A:ARASVD:SA::SDD::A::::::AA:YA:::::::ASA::N::--:-::::::: HVO_1950 :PQ:F:GAG::ES:SG:::RIFE::QS:::::VA::DDGEDGENGE:E::PRDGDDARDA Hut2105 GGG::A::RSDP::::::K::::::Y:M::KRRERAAEAEDGPSES:S:DSN:GHAERDP Hbo1818 MDI:RS::GRRDS:::::QA:IE::QA::::::E:::::::DS:G:AD:::E:::::::: NP0396A S:S::PTV:T::Q:::E:::I:E::::M:K:L::::::::::-::ENA---:-::::::: rrnAC2156 G::RHR::-::N::SDHDS:::A:::D::::::R:::::::::S::EN:::ATDSDTSAS Hmu0059 ::RQRA::--T:E::DE:ESI::::::M:ES:H:::::::::-E::TS::-:-::::::: consensus ----------DETE---- #oth 543443234324422222 HQ3165A RLANKSDDSA:S:::::: hla0878 SAAS:::::::DP:NPSA VNG2576 ::::::::::S:N::::: HVO_1950 TDADDRGEET:GADRKES Hut2105 AREEPADADA:::::::: Hbo1818 ::::::::::::A-:::: NP0396A ::::::::::----:::: rrnAC2156 DAGDEAGATG:::::::: Hmu0059 ::::::::::::::::::