|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1754 | Hut0423 | VNG1616 | NP4796A | rrnAC1742 | Hmu2120 | hla1280 | HQ2869A | HVO_2421 | Hbo2122 |
1219 | Hut0423 | 1737 | 1050 | 1115 | 1188 | 1159 | 1165 | 1099 | 1122 | 1115 |
1315 | VNG1616 | 1050 | 2007 | 1177 | 1165 | 1160 | 1178 | 1210 | 1249 | 1232 |
1341 | NP4796A | 1115 | 1177 | 1740 | 1200 | 1219 | 1227 | 1186 | 1265 | 1217 |
1395 | rrnAC1742 | 1188 | 1165 | 1200 | 1746 | 1389 | 1278 | 1198 | 1247 | 1252 |
1381 | Hmu2120 | 1159 | 1160 | 1219 | 1389 | 1747 | 1250 | 1172 | 1268 | 1240 |
1450 | hla1280 | 1165 | 1178 | 1227 | 1278 | 1250 | 1733 | 1376 | 1373 | 1391 |
1459 | HQ2869A | 1099 | 1210 | 1186 | 1198 | 1172 | 1376 | 1744 | 1512 | 1486 |
1558 | HVO_2421 | 1122 | 1249 | 1265 | 1247 | 1268 | 1373 | 1512 | 1769 | 1538 |
1542 | Hbo2122 | 1115 | 1232 | 1217 | 1252 | 1240 | 1391 | 1486 | 1538 | 1736 |
269 symbols consensus ----------------------------------MTAAPRDELARRIAGEITLSDDPGAT #oth 111111111111111111111111111111122335552.23.13111..111.121.1. Hut0423 :::::::::::::::::::::::::::::::::MDRGSD::R::N::::::AT::R::E: VNG1616 MPAPSSRRGLAVAVRAGVVLDGFFPGVSQTEGMDTDDD::EG::V::S::V::::::::: NP4796A ::::::::::::::::::::::::::::::::::-MRE::A:::E:::::V::::::::: rrnAC1742 :::::::::::::::::::::::::::::::::::AGGA::D::EKM:::VA:::::::: Hmu2120 :::::::::::::::::::::::::::::::::::VRG::A:::EKM::::A:::A::E: hla1280 ::::::::::::::::::::::::::::::::::-MSDA:E::S:::::::::::::::: HQ2869A :::::::::::::::::::::::::::::::::MT::::::D::::::::V:::N::::: HVO_2421 :::::::::::::::::::::::::::::::VFA:::::::D:::::::::::::::::: Hbo2122 ::::::::::::::::::::::::::::::::::::EV::::::::::::::::::A::: consensus LRKWRTDFDVSQTALADQLDVSSSVVSDYESGRRESPGIGVVRRMVEALLDIDERRGGDR #oth 21...11.111.13..22....2..1........21...2213.3.51..21.12...51 Hut0423 IS::::::EIA:SE::AE::::P:::::::::::DN:::A::D:T:T:::A::Q::::RH VNG1616 :::::::::::::::::E:::::::I:::::::::::::AL:S:L:N:::::::::::TH NP4796A :::::EE:::A::T:::E::::A:::::::::::GN:::QI:Q:V::G::TV:::::::: rrnAC1742 ::::::::::A::E:::E::::P:::::::::::DN::::::::L:V:::::::N::::H Hmu2120 V:::::::E::::G:::A::::P:::::::::::DN::::::Q:V:S:::::::::::EH hla1280 :::::::::::::E::::::::::::::::::::::::::::::T:DG::::::::::G: HQ2869A :::::::::I:::T:::::::::::I::::::::::::::::::::::::::::A:::G: HVO_2421 :::::::::I::::::E::::::::::::::::::::::::I::::::::::::A:::S: Hbo2122 :::::::::I::::::E::::::::I:::::::::::::::::::::::::::QA:::S: consensus IRQHARVLSAGFDSDIVQDLREYPAAVPLERFYDAIDATELVRGDQDTVSGHTVINSIEA #oth 21.2...1....1111.4..1.111322245321.22.12234.331213...1.1.13. Hut0423 :::::::I:::::NT::S::::FS::::ID:YFE::E::K:AD:SRE::V:::::D:::: VNG1616 :G:F:::::::::::V:L:::::::::E:DAL:::V::::V:P::R:::::::::D::K: NP4796A V::::::::::::::V:Y:::::::T::IP::HE::G:EPVTE:QAE::A:::::::V:: rrnAC1742 :::::::::::::::V:H:::::S:N:GV::V::::::E::F::S::::A::::::::A: Hmu2120 :::::::::::::::V:H::G::::NL::AD:::::::::::G::A:::A::::::::A: hla1280 L::Y::::::::E::::H:::::ST:::::E::E:MG:::I:::E::H:N:::::::::: HQ2869A :::Y:::I::::E:::::::::::T:I:::TL:E:MG:::I::::H:RI::::I:::::: HVO_2421 :::Y::::::::E:::::::::::TSI::NS:::::G::PI:D::::RI:::::::::Q: Hbo2122 :::Y:::I::::E::::::::::STSI::::L:::M:::::::::H:H::::::::::Q: consensus ITRLSSEEFYRLYGQSTNRALVFTNVTRGESPLVAMRVVTPTPNAVVLHGLEDDDLWEHA #oth .2...111..1.....11.1.2..211........1...3...1..2...235321.11. Hut0423 ::::::::::::::::S::::::::::::::::::::::N::::::::::I:SE:V::R: VNG1616 :Q:::GDG:::::::::S:V:G::::S::::::::::::D:::S::L::::SP::::::: NP4796A :K::::::::::::::::::::::D::::::::::L:::::::S::I::::DA::::::: rrnAC1742 ::::::D:::Q::::::::::::::::::::::::L:::S::::::I::::::EAV:::: Hmu2120 ::::::D:::Q:::::::::::::D::::::::::L::::::::::::::::S:A::D:: hla1280 :::::::::::::::::::::::::::::::::::L:::S::::::::::I::G:::D:: HQ2869A :::::::::::::::::S::::::GI:::::::::::::N::::::::::VTEAE::::: HVO_2421 :::::::::::::::::S::::::G::::::::::::::::::::::::::SK::::::: Hbo2122 :::::::::::::::::S:::I::D:S:::::::::::::::::::I::::TE::::::: consensus PALARIDGFSLAITDRDLDAMLADLRELP #oth 32..33.111..42352213213412535 Hut0423 AD:::V:::A::A:TL::::::DR:A:QF VNG1616 ::::KR::::::V:EMPVED:::S::QHA NP4796A :::::A::V:::T:TMP:E:L:EE::SF: rrnAC1742 QD:::::D:::::::IE:EDL:GG::::: Hmu2120 VD::::::::::VA:AEM:E:::G::::R hla1280 AD:::V:::::::ST::::DC::::QA:- HQ2869A ::::T:::::::LSNQ::ET:ID:V:R:V HVO_2421 ::::T::::A::V::::::E::E:::K:: Hbo2122 :S::S::::::::SN:::::::E:::A::