|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2248 | Hut2464 | VNG1093 | hla0272 | NP1588A | rrnAC1289 | Hmu1689 | HVO_1128 | Hbo0432 | HQ1656A |
1195 | Hut2464 | 3994 | 1129 | 1078 | 1122 | 1133 | 1093 | 1124 | 1145 | 1134 |
1825 | VNG1093 | 1129 | 2259 | 1630 | 1724 | 1748 | 1731 | 1725 | 1689 | 1682 |
1898 | hla0272 | 1078 | 1630 | 2229 | 1762 | 1725 | 1732 | 1782 | 1797 | 1740 |
2003 | NP1588A | 1122 | 1724 | 1762 | 2286 | 1792 | 1763 | 1881 | 1855 | 1809 |
1954 | rrnAC1289 | 1133 | 1748 | 1725 | 1792 | 2256 | 1960 | 1766 | 1824 | 1769 |
1901 | Hmu1689 | 1093 | 1731 | 1732 | 1763 | 1960 | 2245 | 1702 | 1781 | 1717 |
1995 | HVO_1128 | 1124 | 1725 | 1782 | 1881 | 1766 | 1702 | 2243 | 1950 | 1892 |
2047 | Hbo0432 | 1145 | 1689 | 1797 | 1855 | 1824 | 1781 | 1950 | 2237 | 1977 |
1985 | HQ1656A | 1134 | 1682 | 1740 | 1809 | 1769 | 1717 | 1892 | 1977 | 2240 |
535 symbols consensus --MQALVIVAHGSHLNPDSSTPTYDHADTIRATGAFDEVRTGFWKEEPSFREVLRTVEAD #oth 12211..111....1112113.144.1111.2422.11.212....1.13.21...2121 Hut2464 MTE::::VA:::::R::::AL::LS:VEA::DR:C::Q:::A::::S::V:D::::ID:E VNG1093 :::::::::G:::::::G::E:A:T::::::ES:::::::EA:::::::::N::::L:S: hla0272 ::::S::::::::::::G::A::::::::::::::::::K::::::::H:::::::::G: NP1588A ::::::::::::::::::A::::::::::::E::V::::Q:A::::::::::A:::::S: rrnAC1289 :MDE::::A:::::::AE::::::::::::::::::A:::ES::::::::::A::::D:: Hmu1689 ::::::::A::::::SAG:::::F::::::::VS::::::ES::::::H::::::::D:: HVO_1128 ::::::::::::::::::::A::::::::V:EA::::::::::::::::I:::::::::: Hbo0432 :::::::::::::::::::::::QR::::::::D:::::K:::::::::L::::::::S: HQ1656A :::::::::::::::::::::::HQ:::::::S::::::::::::::::L:::::::::: consensus EVYVVPLFISEGYFTEQVIPRELRLDGWDVSEWDSDGLSADHATLTAEDT-DQTIHYCGP #oth 1211....1.1...111.1...11.2321344121112213421.31412143121.11. Hut2464 TA::::::V:Q:::VD::L:::FD:GKD:---------------:AG:P::APEMV:TD: VNG1093 ::::::::::::::::::::::::::DF:PDD:::::TD:::V::E:D:V:EK::::::: hla0272 :I:::::::::::::::::::::::::::::::N:::::::Q:::I:::I::REV::::: NP1588A ::::::::::::::::E:::::::::::ETA::::::T::T::::::A:V::K:V::::: rrnAC1289 :::L::::::::::::::::::F::ED::PEL:::::T::TN:::A::::::::V::::: Hmu1689 :::L::::::::::::::::::F:::E:EPEL:::::T:::T:::::::::G:::::::: HVO_1128 ::::::::::::::::::::::::::::::AD::::::::S:V::::S:VPEK::::::: Hbo0432 ::F::::::::::::::::::::::::::::Q:::::::::T:::::::::S::V::::: HQ1656A :I:L:::::::::::::::::::::::::::::N:::::::T:::E:T:::G:::::::: consensus VGTHDAMTDVIVRRAESVTGDPDVGDGFGLAVVGHGTERNENSAKAIEYHADRIREMDRF #oth 1...41.11.212..321112452112211..........1...1.121.112222322. Hut2464 ::::P:::::VAA::RRYLD:VP-EEDAA:::::::::::P:::D:VYD:VEAL:DHTA: VNG1093 :::::S:SE:::Q::S::::REEF::D::::::::::::::::::::Y::::Q::::GV: hla0272 ::::R:::::::::::::::NS:::E::::::::::::::::::::VQ::::::A:R::: NP1588A ::::::::::V:::::T::D::G::::::::::::::::::::::::::::::VA::::: rrnAC1289 :::::S:S::::Q::::::::::::::::::::::::::::::::::Q::::::::R::: Hmu1689 A::::::S::::Q::Q:::::R::::::::::::::::::::::::::::::::G:R::: HVO_1128 ::::A:::E:L:::::T:::::N::E:::::::::::::::::::::::::::::::::: Hbo0432 ::::ES::::L:::::T::::::::E:::F:::::::::::::::::::::::V:Q:::: HQ1656A ::::E:::::L:::::T:::::S:::EC:F:::::::::::::::::::::::V:DL::: consensus DEVQALFMDEDPEVDDVTDFFESDDIVVVPLFIADGFHTQEDIPEDMGLTDDYRTGYDVP #oth 2..2111...2.111.2312.122.111....11..1..211...12.111.212.122. Hut2464 A::D::::::A:A:E:IL:E:DA:::A::::::::::::RDE:::LL:I:::P:S::P:: VNG1093 G::::V:::::::::::::::DT:::::::::VS::::::::::::::::::::::::I: hla0272 :::K::Y:::::::::LPE::::::V:L::::::::Y:::::::::V::CE:HTE::::: NP1588A :::K:::::::::I::::::::T:::::::::V:::Y:::::::::::::::::::WET: rrnAC1289 ::::S::::::::::::A:Y:::::::::::::::::::::::::::::::::::::::: Hmu1689 :::::::::::::I::::EY::::::::::::V:::Y::E:::::::::::::::::::: HVO_1128 ::::::Y:::E::::::::Y:D:E:V:::::::::::::::::::::::::::::::::: Hbo0432 ::::::Y:::E::::::::Y:::::::::::::::::::::::::::::::::::::::: HQ1656A ::::::Y::::::::::::::DTT::::::::V::::::::::::::::::::::::::: consensus ATVDGHRIWYAGAVGTEGLMADVILERAADAGADVG------------------------ #oth 23.1122...21....12.31..21...1....122111111111111111111111111 Hut2464 G::::R::::TS::::DR:VP:::::::G:::::LDRDVEQDQPVRPDAAEAFLSWLDTA VNG1093 TA::::D:::S::::::P:A:::V:::::::::P:::::::::::::::::::::::::: hla0272 TE:::T:::::::::::P::::::::::::::::L::::::::::::::::::::::::: NP1588A :D::::H:::::::::::::::::I::::::::::::::::::::::::::::::::::: rrnAC1289 T::E::D::::::::::P:::::V:::::::::::S:::::::::::::::::::::::: Hmu1689 T:::::D:::S::::::P:::::L:::::::::::::::::::::::::::::::::::: HVO_1128 :E:E:::::::::::::::::::V::::::::::I::::::::::::::::::::::::: Hbo0432 :A:::::::::::::::::::::V::::::::::ID:::::::::::::::::::::::: HQ1656A ::::D::::::::::::::T::::::::::::::IS:::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hut2464 PAENGSHSREWGDLLVTVEKDTYELRHRDDHGAAQATLTEQDAETFRWFVRTDDDGRFRP VNG1093 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0272 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1588A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1289 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1689 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1128 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0432 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1656A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hut2464 FAGERSLPTGWVLPGLNARELLRAVAAVYPAGIEMWADEPAPVSFRDVAARQTGMYAGVS VNG1093 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0272 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1588A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1289 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1689 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1128 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0432 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1656A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hut2464 DLSNTELDNLTTAVCGNCAKRREWEDGDGDLSADTAERAAVATQTTTSDLPCREPCSFVV VNG1093 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0272 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1588A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1289 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1689 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1128 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0432 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1656A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ---------DAIEEVREETR----G-TAAAGD----------------------- #oth 1111111114123611341311114344442111111111111111111111111 Hut2464 AAAREILAT:S:D:Q:PDQP::::DADVPP::LTQPANRYRVRYRQARGVTQISD VNG1093 :::::::::::VDA:::Q:::::::AN:::::::::::::::::::::::::::: hla0272 :::::::::T:LDD:::T::::::-:-V:T::::::::::::::::::::::::: NP1588A ::::::::::::::::RR:KVATTDVN:S:::::::::::::::::::::::::: rrnAC1289 :::::::::S:::Q:::::G:::::G:T::::::::::::::::::::::::::: Hmu1689 ::::::::::::QR:KS::G::::::AE:R::::::::::::::::::::::::: HVO_1128 :::::::::NSL:V:::R::::::K::PQEAN::::::::::::::::::::::: Hbo0432 :::::::::E::AT::::::::::E::P::::::::::::::::::::::::::: HQ1656A :::::::::T:::T:::Q::::::E::TL:D::::::::::::::::::::::::