|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1967 | Hut0668 | hla1436 | VNG1623 | Hmu2108 | NP1770A | rrnAC1751 | HQ2733A | HVO_2433 | Hbo2141 |
739 | Hut0668 | 1980 | 344 | 373 | 401 | 526 | 432 | 535 | 490 | 457 |
859 | hla1436 | 344 | 2220 | 518 | 503 | 478 | 448 | 558 | 605 | 669 |
721 | VNG1623 | 373 | 518 | 2037 | 449 | 549 | 445 | 444 | 544 | 530 |
898 | Hmu2108 | 401 | 503 | 449 | 2014 | 694 | 566 | 705 | 646 | 771 |
1070 | NP1770A | 526 | 478 | 549 | 694 | 2046 | 573 | 766 | 747 | 805 |
778 | rrnAC1751 | 432 | 448 | 445 | 566 | 573 | 1241 | 630 | 606 | 673 |
1264 | HQ2733A | 535 | 558 | 444 | 705 | 766 | 630 | 2075 | 1065 | 1188 |
1352 | HVO_2433 | 490 | 605 | 544 | 646 | 747 | 606 | 1065 | 2056 | 1141 |
1347 | Hbo2141 | 457 | 669 | 530 | 771 | 805 | 673 | 1188 | 1141 | 2020 |
306 symbols consensus --MTRR-----FRRLLATTTVLTGALMLLGVYTAAAGAGLTCAARWPFCDG-FLGL-FPA #oth 11257111111212131423441331322.23.245.1.11.331..3.11343221213 Hut0668 :::N:::::::::S:V:::LLFVF:TI::::A:KSY::::A:Q::::V:::GL:N::::E hla1436 :::SL:PAWLT:::YA::::GM:LV:FA:::::::T:S::A:Q:Q::L:SDQ:IPE:MTI VNG1623 :::A:::::::SYQ:A:V:A:::F::I:::EF::VS:S:A::GLQ::D:S:Q::PFGL:V Hmu2108 ::::S:::::::::::L:::AG:LL:::V:L:::YK::::::EQ:::L::::WM:::::: NP1770A ::--MD::::::::::LA:::T:ALTA:I::L::T:::::::E::::L:::AVF:::::: rrnAC1751 ::::T::::::::::V:::::::F::I::::::G:I::::::E:::::::::WM:::::: HQ2733A MSIDI::::::L:::I:AS:L:::V::V:::::::::::::::G::::::::Y::::::: HVO_2433 ::::P::::::L:::::GAAAM::V::V:::::::::::::::G:::::::::::::::: Hbo2141 :::NA::::::L:::V:L:VP:::F::V:::::::::::::::G:::::::::::::::: consensus NWSSFIEWFHRLVAMITGFLILGTTVAAWRRGADRRIRLALTVATVLLPLQIILGALTVT #oth 1351.3.12..33.122.2412.2345211456522214.44324221.3.132.24.12 Hut0668 SFP::F::I::V::G:G:LF:V:SAIES:::ETPT:::Y:::LGAL:T:::VL::QQ::: hla1436 :-PD:::::::VW::V:::::I:VAGWT:FGDR:::T:::A:L:VAI:::::TV:::::: VNG1623 :--D:::Q:::S:::VV::F::::GA::Y:NFDA:D:K::GVL:I::::::V:::GT::: Hmu2108 :LV:::::S:::L::LV::AL::VLYL::::QD:::VKW:V:A:V::::S:::::::::: NP1770A :FM:::::::::I::::::::I:SAY::::G::Q::VK::TL::LL:T::::VF::F::L rrnAC1751 ::A::V:::::::::V:::G:::S::::::GEYS:::K::TG::::V::M::L:::N:I- HQ2733A :::::::::::F::::::II::::::T::::RIE::::I::AGS:::::S:::::::::: HVO_2433 :::::L:::::::::L::::::::::Q:::E:VAKGV:Y::V::::I::F::V::::::: Hbo2141 :::::::::::::::LV::::::::IQT::T:::::V:R::A:::::::S:::::::::: consensus E-------YEWLILTAHFITASAIFTAVVAAAVWG----ADRGVSR-LRAAAGGALVGFP #oth 642323112453343314641551235344244357112655654623554565333462 Hut0668 NFGMSE::----V:::::W::FT::G:FAF:F:ATW:::::SIR:SH:T:::V:G::L:: hla1436 LGGLVPGG:TVSTHA::L:V:L::::LLGL:TI::::::GG::SP:L::::I:V:A::IV VNG1623 FSGLVPGG:QP:TQAV:HLA:M::LGT:TYT:LRMR:DA:GI:LG::V:T:VLA::AVL: Hmu2108 ::::::::FTA::TA:::F:::L:LLCLT::C::TV:::EPPS:GG:::TL:IL:A:AV: NP1770A VQEFVF:G:SI:V::L::GL::V:LGLL:::T::AYGDVTTVTM:K:VKQ:GV:::L::: rrnAC1751 -:::::::---------------------------::::-------:------------- HQ2733A T::::::::::V::::::L:::L:::G::L:T::SQ:::PVINR:T::FRIGTL:M:AT: HVO_2433 :::::::::::V:::::YVV:TS:::::::::AR:L:::V::::P::IAD:VRF::::A: Hbo2141 T:::::::::::::S:::::::T:::G::L::A:SF:::ETPA:AE:I:RMM:VLAA:VV consensus ALVVL-TPHAFFSFGPTVQAVYYALGLALFGALVAATAWAREA------GLDR-----VR #oth 464321536634524454253313442354423324522375734454444531111144 Hut0668 :N:L::::PFIS:YT:VLGTLQ::VL:V:VL:VLVLVVVG::KLSGTFRHAPL:::::AS hla1436 :SA:FSRAVP:VTYS:GA::GF:VT:::GHLG::::I:Y:T::VRTGYA::::STAKT:: VNG1623 FE:AFSRGTI:TVY:SWI:IIHHTFE::::T:AFT:FV:SLRR::::::NAT::::::SA Hmu2108 FHLA::DGSL-:AVPVS:LTG::::SFL:W:::::GAL::HGH::::::::P::::::A: NP1770A VM::::::RLL:T::EV::F:::G::F:M:S::LV:AL:G::L::::::::RA::::::P rrnAC1751 -----:-----:N::A:A:VLHHGAAQLI:::M:::::::YTD::::::----:::::-- HQ2733A I:IL:::::::II:D::::S::::V::MIYT:VITIG:::PSVVDDSNSAW-:::::::: HVO_2433 VML:::A::::V:::::T:::::VV:::TYA::L:V:L::NA:HGPRADAYG::::::L: Hbo2141 ::::::S::M:V:::AN:::I::T:::VVY:S:::::V:LGAT:::DAD::::::::::: consensus LAAAGAAALLIALLI--VGRQVYGPLLQLASLGGAVVALVLLVGAAVTLRRRSSAP-SAA #oth 443434336665533115325534466243654454334425414355245446654633 Hut0668 :::LPV:VY:GRH::::----AAS::H:T:Y:LAGL:VYGG:::S::G:F:AG:RT:--- hla1436 :L:::SM:A:VGT:LLGRDLVL:TAFW:RLN:VALG::AT:AI:::W:V:GLG:EG:TT: VNG1623 A:TG:V:L:ST:QVLLG::LFPF::TI:::YYAL:::IAA:::AT:---:I:AH::PT:: Hmu2108 :LF:LGS:VTWFDML:::A:RKF:-:D:TLTDA::::V:::IA::IW::SK::KTGGL:: NP1770A A::G::SV:I::Q:::::A:WAF:DEG:::I::ISF::F::TL:VVKQVHD::Q:LEG:: rrnAC1751 ---------------::-------------------------TAESPSVQSADTQHTAR: HQ2733A MT:SL:::TM:G:::::I:::::AGM::YL:M::SLFI:A:TI::V:::::KDTH:P:RG HVO_2433 FVT:P:SVVVL::::::A:::::::V:E::H:::T:L::::V:::::LV:GGLPV::Q:G Hbo2141 ::TG:::LI:VS::V::L::::::GT::YV:V::T:::FG:VAA::Y:::S::VQQ::RS consensus DP-G-D #oth 554331 Hut0668 --:-:- hla1436 ::VRG: VNG1623 TA:-:- Hmu2108 TRAD:- NP1770A A:A::: rrnAC1751 :D:-:- HQ2733A I:G::: HVO_2433 ELNDA: Hbo2141 I:G:S: